Role of phages in the pathogenesis of Burkholderia, or ‘Where are the toxin genes in Burkholderia phages?’

Coenye, 2003, Diversity and significance of Burkholderia species occupying diverse ecological niches, Environ Microbiol, 5, 719, 10.1046/j.1462-2920.2003.00471.x

O'Sullivan, 2005, Biotechnological potential within the genus Burkholderia, Lett Appl Microbiol, 41, 8, 10.1111/j.1472-765X.2005.01758.x

LiPuma, 2002, An epidemic Burkholderia cepacia complex strain identified in soil, Lancet, 359, 2002, 10.1016/S0140-6736(02)08836-0

Zhang, 2007, Diversity and distribution of Burkholderia cepacia complex in the rhizosphere of rice and maize, FEMS Microbiol Lett, 266, 231, 10.1111/j.1574-6968.2006.00530.x

Wiersinga, 2006, Melioidosis: insights into the pathogenicity of Burkholderia pseudomallei, Nat Rev Microbiol, 4, 272, 10.1038/nrmicro1385

Mahenthiralingam, 2005, The multifarious, multireplicon Burkholderia cepacia complex, Nat Rev Microbiol, 3, 144, 10.1038/nrmicro1085

Boyd, 2002, Common themes among bacteriophage-encoded virulence factors and diversity among the bacteriophages involved, Trends Microbiol, 10, 521, 10.1016/S0966-842X(02)02459-9

Banks, 2002, The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence, Trends Microbiol, 10, 515, 10.1016/S0966-842X(02)02461-7

Sitkiewicz, 2006, Emergence of a bacterial clone with enhanced virulence by acquisition of a phage encoding a secreted phospholipase A2, Proc Natl Acad Sci USA, 103, 16009, 10.1073/pnas.0607669103

Perna, 2001, Genome sequence of enterohaemorrhagic Escherichia coli O157:H7, Nature, 409, 529, 10.1038/35054089

Tobe, 2006, An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination, Proc Natl Acad Sci USA, 103, 14941, 10.1073/pnas.0604891103

Ohnishi, 2001, Diversification of Escherichia coli genomes: are bacteriophages the major contributors?, Trends Microbiol, 9, 481, 10.1016/S0966-842X(01)02173-4

Stevens, 2005, Identification of a bacterial factor required for actin-based motility of Burkholderia pseudomallei, Mol Microbiol, 56, 40, 10.1111/j.1365-2958.2004.04528.x

Caraher, 2007, Invasion and biofilm formation of Burkholderia dolosa is comparable with Burkholderia cenocepacia and Burkholderia multivorans, J Cyst Fibros, 6, 49, 10.1016/j.jcf.2006.05.007

Caraher, 2007, Comparison of antibiotic susceptibility of Burkholderia cepacia complex organisms when grown planktonically or as biofilm in vitro, Eur J Clin Microbiol Infect Dis, 26, 213, 10.1007/s10096-007-0256-x

Langley, 2003, Lysogeny and bacteriophage host range within the Burkholderia cepacia complex, J Med Microbiol, 52, 483, 10.1099/jmm.0.05099-0

Seed, 2005, Isolation and characterization of bacteriophages of the Burkholderia cepacia complex, FEMS Microbiol Lett, 251, 273, 10.1016/j.femsle.2005.08.011

Grishkina, 1993, Spontaneous phage production in Pseudomonas pseudomallei and in a range of hosts of melioidosis phages among representatives in the genus Pseudomonas, Mikrobiol Z, 55, 43

Hens, 2006, New temperate DNA phage BcP15 acts as a drug resistance vector, Arch Virol, 151, 1345, 10.1007/s00705-005-0713-8

Hens, 2005, A new small temperate DNA phage BcP15 isolated from Burkholderia cepacia DR11, Arch Virol, 150, 2421, 10.1007/s00705-005-0601-2

Matsumoto, 1986, A generalized transducing phage of Pseudomonas cepacia, J Gen Microbiol, 132, 2583

Denisov, 1991, The level of spontaneous phage production and sensitivity to melioidosis phages of museum cultures of Pseudomonas pseudomallei, Mikrobiol Z, 53, 66

Langley, 2005, Temperate bacteriophages DK4 and BcepMu from Burkholderia cenocepacia J2315 are identical, FEMS Immunol Med Microbiol, 45, 349, 10.1016/j.femsim.2005.06.001

Barondess, 1990, A bacterial virulence determinant encoded by lysogenic coliphage lambda, Nature, 346, 871, 10.1038/346871a0

Summer, 2004, Burkholderia cenocepacia phage BcepMu and a family of Mu-like phages encoding potential pathogenesis factors, J Mol Biol, 340, 49, 10.1016/j.jmb.2004.04.053

Condon, 2006, Shutdown decay of mRNA, Mol Microbiol, 61, 573, 10.1111/j.1365-2958.2006.05270.x

Gerdes, 2005, Prokaryotic toxin–antitoxin stress response loci, Nat Rev Microbiol, 3, 371, 10.1038/nrmicro1147

Magnuson, 1998, Corepression of the P1 addiction operon by Phd and Doc, J Bacteriol, 180, 6342, 10.1128/JB.180.23.6342-6351.1998

Thomas, 2007, Iron acquisition mechanisms of the Burkholderia cepacia complex, Biometals, 10.1007/s10534-006-9065-4

Holden, 2004, Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei, Proc Natl Acad Sci USA, 101, 14240, 10.1073/pnas.0403302101

Allison, 2000, Serotype-converting bacteriophages and O-antigen modification in Shigella flexneri, Trends Microbiol, 8, 17, 10.1016/S0966-842X(99)01646-7

Gemski, 1975, Phage conversion of Shigella flexneri group antigens, Infect Immun, 11, 685, 10.1128/IAI.11.4.685-691.1975

Silipo, 2007, The complete structure and pro-inflammatory activity of the lipooligosaccharide of the highly epidemic and virulent Gram-negative bacterium Burkholderia cenocepacia ET-12 (strain J2315), Chemistry, 13, 3501, 10.1002/chem.200601406

Ast, 2002, Expression of the ExeAB complex of Aeromonas hydrophila is required for the localization and assembly of the ExeD secretion port multimer, Mol Microbiol, 44, 217, 10.1046/j.1365-2958.2002.02870.x

Erzberger, 2006, Evolutionary relationships and structural mechanisms of AAA+ proteins, Annu Rev Biophys Biomol Struct, 35, 93, 10.1146/annurev.biophys.35.040405.101933

Katz, 1991, Identification of three gene regions associated with virulence in Dichelobacter nodosus, the causative agent of ovine footrot, J Gen Microbiol, 137, 2117, 10.1099/00221287-137-9-2117

Iyer, 2005, Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members, Nucleic Acids Res, 33, 3875, 10.1093/nar/gki702

Sofia, 2001, Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods, Nucleic Acids Res, 29, 1097, 10.1093/nar/29.5.1097

Becker, 1995, Extension of the Rhizobium meliloti succinoglycan biosynthesis gene cluster: identification of the exsA gene encoding an ABC transporter protein, and the exsB gene which probably codes for a regulator of succinoglycan biosynthesis, Mol Gen Genet, 249, 487, 10.1007/BF00290574

Jo, 1997, Isolation of ALU1-P gene encoding a protein with aluminum tolerance activity from Arthrobacter viscosus, Biochem Biophys Res Commun, 239, 835, 10.1006/bbrc.1997.7567

Pedulla, 2003, Origins of highly mosaic mycobacteriophage genomes, Cell, 113, 171, 10.1016/S0092-8674(03)00233-2

Nierman, 2004, Structural flexibility in the Burkholderia mallei genome, Proc Natl Acad Sci USA, 101, 14246, 10.1073/pnas.0403306101

Yu, 2006, Genomic patterns of pathogen evolution revealed by comparison of Burkholderia pseudomallei, the causative agent of melioidosis, to avirulent Burkholderia thailandensis, BMC Microbiol, 10.1186/1471-2180-6-46

Kim, 2005, Bacterial genome adaptation to niches: divergence of the potential virulence genes in three Burkholderia species of different survival strategies, BMC Genomics, 10.1186/1471-2164-6-174

Chain, 2006, Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility, Proc Natl Acad Sci USA, 103, 15280, 10.1073/pnas.0606924103

Hilbi, 2007, Environmental predators as models for bacterial pathogenesis, Environ Microbiol, 9, 563, 10.1111/j.1462-2920.2007.01238.x

Vonberg, 2007, Hospital-acquired infections related to contaminated substances, J Hosp Infect, 65, 15, 10.1016/j.jhin.2006.09.018

Venter, 2004, Environmental genome shotgun sequencing of the Sargasso Sea, Science, 304, 66, 10.1126/science.1093857

Mahenthiralingam, 2006, Multilocus sequence typing breathes life into a microbial metagenome, PLoS ONE, 10.1371/journal.pone.0000017