Biogeosciences
1726-4189
1726-4170
Đức
Cơ quản chủ quản: European Geosciences Union , Copernicus Gesellschaft mbH
Lĩnh vực:
Ecology, Evolution, Behavior and SystematicsEarth-Surface Processes
Phân tích ảnh hưởng
Thông tin về tạp chí
Biogeosciences (BG) is a not-for-profit international scientific journal dedicated to the publication and discussion of research articles, short communications, and review papers on all aspects of the interactions between the biological, chemical, and physical processes in terrestrial or extraterrestrial life with the geosphere, hydrosphere, and atmosphere. The objective of the journal is to cut across the boundaries of established sciences and achieve an interdisciplinary view of these interactions. Experimental, conceptual, and modelling approaches are welcome. With the above objective, Biogeosciences covers the following fields: biodiversity and ecosystem function; evolutionary ecology; environmental microbiology; biogeochemistry and global elemental cycles; biogeochemistry and gas exchange; plant–soil interactions; biomineralization, microbial weathering, and sedimentation; interactions between microbes, organic matter sediments, and rocks; biogeophysics; Earth system sciences and response to global changes; palaeogeobiology, including origin and evolution of life, evolution of the biosphere, sedimentary records, and the development and use of proxies; astrobiology and exobiology.
Các bài báo tiêu biểu
Increasing iron concentrations in surface waters – a factor behind brownification? Abstract. Browning of inland waters has been noted over large parts of the Northern hemisphere and is a phenomenon with both ecological and societal consequences. The increase in water color is generally ascribed to increasing concentrations of dissolved organic matter of terrestrial origin. However, oftentimes the increase in water color is larger than that of organic matter, implying that changes in the concentration of organic matter alone cannot explain the enhanced water color. Water color is known to be affected also by the quality of organic matter and the prevalence of iron. Here we investigated trends in water color, organic matter and iron between 1972 and 2010 in 30 rivers draining into the Swedish coast (data from the national Swedish monitoring program), and performed a laboratory iron addition experiment to natural waters, to evaluate the role of iron and organic matter in determining water color. By comparing the effect of iron additions on water color in the experiment, to variation in water color and iron concentration in the monitoring data, we show that iron can explain a significant share of the variation in water color (on average 25 %), especially in the rivers in the north of Sweden (up to 74 %). Furthermore, positive trends for iron are seen in 27 of 30 rivers (21–468 %) and the increase in iron is larger than that of organic matter, indicating that iron and organic matter concentrations are controlled by similar but not identical processes. We speculate that increasing iron concentrations can be caused by changes in redox conditions, that mean that more anoxic water with high concentrations of soluble FeII are feeding into the surface waters. More studies are needed about why iron is increasing so strongly, since both causes and consequences are partly different from those of increasing organic matter content.
Tập 9 Số 4 - Trang 1465-1478
Physical and chemical characterization of biochars derived from different agricultural residues Abstract. Biochar is widely recognized as an efficient tool for carbon sequestration and soil fertility. The understanding of its chemical and physical properties, which are strongly related to the type of the initial material used and pyrolysis conditions, is crucial to identify the most suitable application of biochar in soil. A selection of organic wastes with different characteristics (e.g., rice husk (RH), rice straw (RS), wood chips of apple tree (Malus pumila) (AB), and oak tree (Quercus serrata) (OB)) were pyrolyzed at different temperatures (400, 500, 600, 700, and 800 °C) in order to optimize the physicochemical properties of biochar as a soil amendment. Low-temperature pyrolysis produced high biochar yields; in contrast, high-temperature pyrolysis led to biochars with a high C content, large surface area, and high adsorption characteristics. Biochar obtained at 600 °C leads to a high recalcitrant character, whereas that obtained at 400 °C retains volatile and easily labile compounds. The biochar obtained from rice materials (RH and RS) showed a high yield and unique chemical properties because of the incorporation of silica elements into its chemical structure. The biochar obtained from wood materials (AB and OB) showed high carbon content and a high absorption character.
Tập 11 Số 23 - Trang 6613-6621
Surface circulation and upwelling patterns around Sri Lanka Abstract. Sri Lanka occupies a unique location within the equatorial belt in the northern Indian Ocean, with the Arabian Sea on its western side and the Bay of Bengal on its eastern side, and experiences bi-annually reversing monsoon winds. Aggregations of blue whale (Balaenoptera musculus) have been observed along the southern coast of Sri Lanka during the northeast (NE) monsoon, when satellite imagery indicates lower productivity in the surface waters. This study explored elements of the dynamics of the surface circulation and coastal upwelling in the waters around Sri Lanka using satellite imagery and numerical simulations using the Regional Ocean Modelling System (ROMS). The model was run for 3 years to examine the seasonal and shorter-term (~10 days) variability. The results reproduced correctly the reversing current system, between the Equator and Sri Lanka, in response to the changing wind field: the eastward flowing Southwest Monsoon Current (SMC) during the southwest (SW) monsoon transporting 11.5 Sv (mean over 2010–2012) and the westward flowing Northeast Monsoon Current (NMC) transporting 9.6 Sv during the NE monsoon, respectively. A recirculation feature located to the east of Sri Lanka during the SW monsoon, the Sri Lanka Dome, is shown to result from the interaction between the SMC and the island of Sri Lanka. Along the eastern and western coasts, during both monsoon periods, flow is southward converging along the southern coast. During the SW monsoon, the island deflects the eastward flowing SMC southward, whilst along the eastern coast, the southward flow results from the Sri Lanka Dome recirculation. The major upwelling region, during both monsoon periods, is located along the southern coast, resulting from southward flow converging along the southern coast and subsequent divergence associated with the offshore transport of water. Higher surface chlorophyll concentrations were observed during the SW monsoon. The location of the flow convergence and hence the upwelling centre was dependent on the relative strengths of wind-driven flow along the eastern and western coasts: during the SW (NE) monsoon, the flow along the western (eastern) coast was stronger, migrating the upwelling centre to the east (west).
Tập 11 Số 20 - Trang 5909-5930
Mixing in the Black Sea detected from the temporal and spatial variability of oxygen and sulfide – Argo float observations and numerical modelling Abstract. The temporal and spatial variability of the upper ocean hydrochemistry in the Black Sea is analysed using data originating from profiling floats with oxygen sensors and carried out with a coupled three-dimensional circulation-biogeochemical model including 24 biochemical state variables. Major focus is on the dynamics of suboxic zone which is the interface separating oxygenated and anoxic waters. The scatter of oxygen data seen when plotted in density coordinates is larger than those for temperature, salinity and passive tracers. This scatter is indicative of vigorous biogeochemical reactions in the suboxic zone, which acts as a boundary layer or internal sink for oxygen. This internal sink affects the mixing patterns of oxygen compared to the ones of conservative tracers. Two different regimes of ventilation of pycnocline were clearly identified: a gyre-dominated (cyclonic) regime in winter and a coastal boundary layer (anticyclonic eddy)-dominated regime in summer. These contrasting states are characterized by very different pathways of oxygen intrusions along the isopycnals and vertical oxygen conveyor belt organized in multiple-layered cells formed in each gyre. The contribution of the three-dimensional modelling to the understanding of the Black Sea hydro-chemistry, and in particular the coast-to-open-sea mixing, is also demonstrated. Evidence is given that the formation of oxic waters and of cold intermediate waters, although triggered by the same physical process, each follow a different evolution. The difference in the depths of the temperature minimum and the oxygen maximum indicates that the variability of oxygen is not only just a response to physical forcing and changes in the surface conditions, but undergoes its own evolution.
Tập 11 Số 20 - Trang 5707-5732
Biomass burning emissions estimated with a global fire assimilation system based on observed fire radiative power Abstract. The Global Fire Assimilation System (GFASv1.0) calculates biomass burning emissions by assimilating Fire Radiative Power (FRP) observations from the MODIS instruments onboard the Terra and Aqua satellites. It corrects for gaps in the observations, which are mostly due to cloud cover, and filters spurious FRP observations of volcanoes, gas flares and other industrial activity. The combustion rate is subsequently calculated with land cover-specific conversion factors. Emission factors for 40 gas-phase and aerosol trace species have been compiled from a literature survey. The corresponding daily emissions have been calculated on a global 0.5° × 0.5° grid from 2003 to the present. General consistency with the Global Fire Emission Database version 3.1 (GFED3.1) within its accuracy is achieved while maintaining the advantages of an FRP-based approach: GFASv1.0 makes use of the quantitative information on the combustion rate that is contained in the FRP observations, and it detects fires in real time at high spatial and temporal resolution. GFASv1.0 indicates omission errors in GFED3.1 due to undetected small fires. It also exhibits slightly longer fire seasons in South America and North Africa and a slightly shorter fire season in Southeast Asia. GFASv1.0 has already been used for atmospheric reactive gas simulations in an independent study, which found good agreement with atmospheric observations. We have performed simulations of the atmospheric aerosol distribution with and without the assimilation of MODIS aerosol optical depth (AOD). They indicate that the emissions of particulate matter need to be boosted by a factor of 2–4 to reproduce the global distribution of organic matter and black carbon. This discrepancy is also evident in the comparison of previously published top-down and bottom-up estimates. For the time being, a global enhancement of the particulate matter emissions by 3.4 is recommended. Validation with independent AOD and PM10 observations recorded during the Russian fires in summer 2010 show that the global Monitoring Atmospheric Composition and Change (MACC) aerosol model with GFASv1.0 aerosol emissions captures the smoke plume evolution well when organic matter and black carbon are enhanced by the recommended factor. In conjunction with the assimilation of MODIS AOD, the use of GFASv1.0 with enhanced emission factors quantitatively improves the forecast of the aerosol load near the surface sufficiently to allow air quality warnings with a lead time of up to four days.
Tập 9 Số 1 - Trang 527-554
Heavy metal incorporation in foraminiferal calcite: results from multi-element enrichment culture experiments with <i>Ammonia tepida</i> Abstract. The incorporation of heavy metals into carbonate tests of the shallow water benthic foraminifer Ammonia tepida was investigated under controlled laboratory conditions. Temperature, salinity, and pH of the culture solutions were kept constant throughout the duration of this experiment, while trace metal concentrations were varied. Concentrations of Ni, Cu, and Mn were set 5-, 10-, and 20 times higher than levels found in natural North Sea water; for reference, a control experiment with pure filtered natural North Sea water was also analysed. The concentrations of Cu and Ni from newly grown chambers were determined by means of both μ-synchrotron XRF and Laser Ablation Inductively Coupled Plasma Mass Spectroscopy (LA-ICP-MS). The results of both independent analytical techniques agreed within the analytical uncertainty. In general, the concentration of the analysed elements in the tests increased in line with their concentration in the culture solutions. Potential toxic and/or chemical competition effects might have resulted in the decreased incorporation of Ni and Cu into the calcite of the specimens exposed to the highest elemental concentrations. Mn incorporation exhibited large variability in the experiment with the 20-fold increased element concentrations, potentially due to antagonistic effects with Cu. The partition coefficients of Cu and Ni were calculated to be 0.14 ± 0.02 and 1.0 ± 0.5, respectively, whereas the partition coefficient of Mn was estimated to be least 2.4. These partition coefficients now open the way for reconstructing past concentrations for these elements in sea water.
Tập 7 Số 8 - Trang 2339-2350
Copper incorporation in foraminiferal calcite: results from culturing experiments Abstract. A partition coefficient for copper (DCu) in foraminiferal calcite has been determined by culturing individuals of two benthic species under controlled laboratory conditions. The partition coefficient of a trace element (TE) is an emperically determined relation between the TE/Ca ratio in seawater and the TE/Ca ratio in foraminiferal calcite and has been established for many divalent cations. Despite its potential to act as a tracer of human-induced, heavy metal pollution, data is not yet available for copper. Since partition coefficients are usually a function of multiple factors (seawater temperature, pH, salinity, metabolic activity of the organism, etc.), we chose to analyze calcite from specimens cultured under controlled laboratory conditions. They were subjected to different concentrations of Cu2+ (0.1–20 µmol/l) and constant temperature (10 and 20°C), seawater salinity and pH. We monitored the growth of new calcite in specimens of the temperate, shallow-water foraminifer Ammonia tepida and in the tropical, symbiont-bearing Heterostegina depressa. Newly formed chambers were analyzed for Cu/Ca ratios by laser ablation-ICP-MS. The estimated partition coefficient (0.1–0.4) was constant to within experimental error over a large range of (Cu/Ca)seawater ratios and was remarkably similar for both species. Neither did the presence or absence of symbionts affect the DCu, nor did we find a significant effect of temperature or salinity on Cu-uptake.
Tập 4 Số 4 - Trang 493-504
Calibration of δ<sup>18</sup>O of cultured benthic foraminiferal calcite as a function of temperature Abstract. The geochemical composition of deep-sea benthic foraminiferal calcite is widely used to reconstruct sea floor paleoenvironments. The calibration of the applied proxy methods has until now been based on field observations in complex natural ecosystems where multiple factors are interfering. However, laboratory experiments with stable physico-chemical conditions appear to be the ideal way to evaluate the influence of a single parameter. In this paper, we present the oxygen isotopic composition of deep-sea benthic foraminiferal shells entirely calcified under controlled experimental conditions over a large temperature range (4 to 19 °C). The new laboratory protocols developed for this study allowed us to produce large quantities of shells in stable conditions, so that also the shell size effect could be investigated. It appears that when considering a narrow test size range, the curve describing the temperature dependency of δ18O in Bulimina marginata is parallel to the thermodynamically determined curve observed in inorganically precipitated calcite (−0.22‰ °C−1). This observation validates the use of δ18O of this benthic species in paleoceanographical studies. Over the studied size range (50 to 300 μm), the effect of test size was 0.0014‰ μm−1, confirming previous suggestions of a substantial test size effect on δ18O of benthic foraminifera. This study opens new perspectives for future proxy calibrations in laboratory set-ups with deep-sea benthic foraminifera (e.g. quantification of the influence of the carbonate chemistry).
Tập 7 Số 4 - Trang 1349-1356
A new model for biomineralization and trace-element signatures of Foraminifera tests Abstract. The Mg/Ca ratio of Foraminifera calcium carbonate tests is used as proxy for seawater temperature and widely applied to reconstruct global paleo-climatic changes. However, the mechanisms involved in the carbonate biomineralization process are poorly understood. The current paradigm holds that calcium ions for the test are supplied primarily by endocytosis of seawater. Here, we combine confocal-laser scanning-microscopy observations of a membrane-impermeable fluorescent marker in the extant benthic species Ammonia aomoriensis with dynamic 44Ca-labeling and NanoSIMS isotopic imaging of its test. We infer that Ca for the test in A. aomoriensis is supplied primarily via trans-membrane transport, but that a small component of passively transported (e.g., by endocytosis) seawater to the site of calcification plays a key role in defining the trace-element composition of the test. Our model accounts for the full range of Mg/Ca and Sr/Ca observed for benthic Foraminifera tests and predicts the effect of changing seawater Mg/Ca ratio. This places foram-based paleoclimatology into a strong conceptual framework.
Tập 10 Số 10 - Trang 6759-6767
Model analysis of the effects of atmospheric drivers on storage water use in Scots pine Abstract. Storage water use is an indirect consequence of the interplay between different meteorological drivers through their effect on water flow and water potential in trees. We studied these microclimatic drivers of storage water use in Scots pine (Pinus sylvestris L.) growing in a temperate climate. The storage water use was modeled using the ANAFORE model, integrating a dynamic water flow and – storage model with a process-based transpiration model. The model was calibrated and validated with sap flow measurements for the growing season of 2000 (26 May–18 October). Because there was no severe soil drought during the study period, we were able to study atmospheric effects. Incoming radiation and vapour pressure deficit (VPD) were the main atmospheric drivers of storage water use. The general trends of sap flow and storage water use are similar, and follow more or less the pattern of incoming radiation. Nevertheless, considerable differences in the day-to-day pattern of sap flow and storage water use were observed. VPD was determined to be one of the main drivers of these differences. During dry atmospheric conditions (high VPD) storage water use was reduced. This reduction was higher than the reduction in measured sap flow. Our results suggest that the trees did not rely more on storage water during periods of atmospheric drought, without severe soil drought. The daily minimum tree water content was lower in periods of high VPD, but the reserves were not completely depleted after the first day of high VPD, due to refilling during the night. Nevertheless, the tree water content deficit was a third important factor influencing storage water use. When storage compartments were depleted beyond a threshold, storage water use was limited due to the low water potential in the storage compartments. The maximum relative contribution of storage water to daily transpiration was also constrained by an increasing tree water content deficit.
Tập 4 Số 4 - Trang 657-671