Microbial diversity in surface sediments of the Xisha Trough, the South China Sea

Acta Ecologica Sinica - Tập 28 - Trang 1166-1173 - 2008
Li Tao1, Wang Peng1, Wang Pinxian1
1State Key Laboratory of Marine Geology, Tongji University, Shanghai 200092, China

Tài liệu tham khảo

Parkes, 1994, Deep bacterial biosphere in Pacific Ocean sediments, Nature, 371, 410, 10.1038/371410a0

Whitman, 1998, Prokaryotes: the unseen majority, Proceedings of the National Academy of Sciences of the United States of America, 95, 6578, 10.1073/pnas.95.12.6578

D'Hondt, 2004, Distributions of microbial activities in deep subseafloor sediments, Science, 306, 2216, 10.1126/science.1101155

Wellsbury, 2002, Geomicrobiology of seep, low organic carbon sediments in the Woodlark Basin, Pacific Ocean, FEMS Microbiology Ecology, 42, 59, 10.1111/j.1574-6941.2002.tb00995.x

Newberry, 2004, Diversity of prokaryotes and Methanogenesis in deep subsurface sediments from the Nankai Trough, Ocean Drilling Program Leg 190, Environmental Microbiology, 6, 274, 10.1111/j.1462-2920.2004.00568.x

Bidle, 1999, A phylogenetic analysis of microbial communities associated with methane hydrate containing marine fluids and sediments in the Cascadia margin (ODP site 892B), FEMS Microbiology Letters, 177, 101, 10.1111/j.1574-6968.1999.tb13719.x

Inagaki, 2003, Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of Okhotsk, Applied and Environmental Microbiology, 69, 7224, 10.1128/AEM.69.12.7224-7235.2003

Heijs, 2007, Use of 16S rRNA gene based clone libraries to assess microbial communities potentially involved in anaerobic methane oxidation in a Mediterranean cold seep, Microbial Ecology, 53, 384, 10.1007/s00248-006-9172-3

Qu, 2004, Phylogenetic diversity of bacteria and archaea in the Nansha marine sediment, as determined by 16S rDNA analysis, Oceanologia et Limnologia Sinica, 35, 89

Dai, 2002, A preliminary study on 16S rDNA diversity of bacteria in the Nansha marine sediment, the South China Sea, Progress in Natural Science, 12, 479

Zhou, 1997, Phylogenetic diversity of a bacterial community determined from Siberian tundra soil DNA, Microbiology, 143, 3913, 10.1099/00221287-143-12-3913

Swofford D L. PAUP: Phylogenetic analysis using parsimony (* and other methods). Version 4.0, Sunderland, Massachusetts: Sinauer Associates, 1999.

Chao

Marchesi, 2001, Methanogen and bacterial diversity and distribution in deep gas hydrate sediments from the Cascadia margin as revealed by 16S rRNA molecular analysis, FEMS Microbiology Ecology, 34, 221, 10.1111/j.1574-6941.2001.tb00773.x

Li, 1999, Bacterial diversity in deep-sea sediments from different depths, Biodiversity and Conservation, 8, 659, 10.1023/A:1008848203739

Inagaki, 2002, Molecular phylogenetic analyses of reversetranscribed bacterial rRNA obtained from deep-sea cold seep sediments, Environmental Microbiology, 4, 277, 10.1046/j.1462-2920.2002.00294.x

Teske, 2002, Microbial diversity of hydrothermal sediments in the Guaymas Basin: Evidence for anaerobic methanotrophic communities, Applied and Environmental Microbiology, 68, 1994, 10.1128/AEM.68.4.1994-2007.2002

Kormas, 2003, Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176), FEMS Microbiology Ecology, 45, 115, 10.1016/S0168-6496(03)00128-4

Nercessian, 2005, Diversity of bacteria and archaea associated with a carbonate-rich metalliferous sediment sample from the rainbow vent field on the mid-Atlantic ridge, Environmental Microbiology, 7, 698, 10.1111/j.1462-2920.2005.00744.x

López-García, 2003, Bacterial diversity in hydrothermal sediment and epsilonproteobacterial dominance in experimental microcolonizers at the mid-Atlantic ridge, Environmental Microbiology, 5, 961, 10.1046/j.1462-2920.2003.00495.x

Norris, 2002, Soil microbial community structure across a thermal gradient following a geothermal heating event, Applied and Environmental Microbiology, 68, 6300, 10.1128/AEM.68.12.6300-6309.2002

Xu, 2003, Phylogenetic analysis of archaeal 16S rDNA in deep-sea sediment, Progress in Natural Science, 13, 589

Takai, 2001, Archaeal diversity in waters from deep South African gold mines, Applied and Environmental Microbiology, 67, 5750, 10.1128/AEM.67.21.5750-5760.2001

Sørensen, 2006, Stratified communities of active archaea in deep marine subsurface sediments, Applied and Environmental Microbiology, 72, 4596, 10.1128/AEM.00562-06