Discrimination of Coffea liberica and Coffea liberica var. Dewevrei: Silverskin Morphological Traits and seed Diterpenes Content

Tropical Plant Biology - Tập 15 - Trang 247-259 - 2022
Paola Crisafulli1, Elena Guercia1, Luciano Navarini1
1illycaffé Spa, Trieste, Italy

Tóm tắt

Coffea liberica originally found near Monrovia in Liberia is the third commercially exploited coffee species known for its larger cherries, compared with those of Coffea arabica or Coffea canephora; it contributes less than one per cent of the marketed coffee. The latter reflects in part the beverage quality being inferior to that of Arabica and in part the agronomical performance not satisfying when compared with those of Robusta. However, this species remains still attracting for some genetical characteristic like certain pest resistance genes in breeding programs as the resistance to coffee leaf rust conferred by the SH3 locus. Currently, all Liberica taxa were grouped in one species, C. liberica W. Bull ex Hiern that included two varieties, C. liberica var. liberica, C. liberica var. dewevrei (De Wild. and T. Durand) Le Brun, and a form C. liberica f. bwambensis Bridson. The taxonomic differences between the two varieties still raise doubts that leave the question ‘species or variety?‘ still open. For this reason, the search of possible traits or molecular markers able to discriminate and shed light on these doubts has never stopped. In this paper we focus our attention on two characteristics not yet investigated in detail: silverskin tissue and seed diterpenes. For the first time, an in-depth microscopic study of silverskin morphology was used to discriminate liberica from dewevrei coupled with the diterpenes characterization, the major components of the unsaponifiable fraction of seed lipids, already known as molecular markers and efficiently used for coffee species authentication purposes.

Tài liệu tham khảo

Anthony F, Clifford MN, Noirot M (1993) Biochemical diversity in the genus Coffea L.: chlorogenic acids, caffeine and mozambioside contents. Genet Resour Crop Evol 40:61–70. DOI https://doi.org/10.1007/BF00052636

Arboleda E (2019) Comparing Performances of Data Mining Algorithms for Classification of Green Coffee Beans. Int J Eng Adv Res Tech 8:1563–1567

Balinado LO, Cardenas LB (2019) Trichome Composition of Leaf Domatiaas Potential Morphoanatomical Marker of the Four Commercially Viable Coffea Species. Philipp J Sci 148:385–387

Baltazar AMP, Buot IE Jr (2019) Short Communication: Leaf architectural analysis of taxonomically confusing coffee species: Coffea liberica and Coffea liberica var. dewevrei Biodiversitas 20:1560–1567. DOI https://doi.org/10.13057/biodiv/D200611

Bridson DM (1988a) Coffea. In: Polhill RM (ed) Flora of Tropical East Africa, Rubiaceae, Part 2, Rotterdam: Balkema, pp 415–474

Bridson DM (1988b) Classification. In: Wrigley G (ed) Coffee – Tropical Agriculture Series. Longman Scientific & Technical, Harlow, pp 61–75

Campa C, Ballester JF, Doulbeau S, Dussert S, Hamon S, Noirot M (2004) Trigonelline and sucrose diversity in wild Coffea species. Food Chem 88:39–43. DOI https://doi.org/10.1016/j.foodchem.2004.01.020

Cao EP, Constantino-Santos DM, Ramos LAP, Santos BS, Quilang JP, Mojica RM (2014) Molecular and morphological differentiation among Coffea (Rubiaceae) varieties grown in the farms of Cavite Province, Philippines. Philipp Sci Lett 7:387–397

Chevalier A (1947) In: Lechevalier P (ed) Les caféiers du globe III – Systématique des caféiers et faux-caféiers, Maladies et Insectes nuisibles. Encyclopédie biologique XXVIII, Paris, p 352

Claude J-F, Joseph P, Abati Y, Baillard K, Jean-Francois Y, Ely-Marius S, Sophie S, Simphor J-E, Major P, Marc J-V (2019) Environments Conducive to Coffea liberica in Martinique. Int J Sci 8:26–37. DOI https://doi.org/10.18483/ijSci.2235

Crisafulli P, Navarini L, Pallavicini A, Illy A (2014) Coffea liberica Bull. ex Hiern: seed morphological observations. In: Proceeding of 25th International Conference on Coffee Science, ASIC Colombia, Armenia, 2014

Charr J-C, Garavito A, Guyeux C, Crouzillat D, Descombes P, Fournier C, Ly SN, Raharimalala EN, Rakotomalala J-J, Stoffelen P, Janssens S, Hamon P, Guyot R (2020) Complex evolutionary history of coffees revealed by full plastid genomes and 28,800 nuclear SNP analyses, with particular emphasis on Coffea canephora (Robusta coffee). Mol Phylogenet Evol 151:106906. DOI https://doi.org/10.1016/j.ympev.2020.106906

Davis AP, Govaerts R, Bridson DM, Stoffelen P (2006) An annotated taxonomic conspectus of the genus Coffea (Rubiaceae). Bot J Linn Soc 152:465–512. DOI https://doi.org/10.1111/j.1095-8339.2006.00584.x

de Roos B, van der Weg G, Urgert R, van de Bovenkamp P, Charrier A, Katan MB (1997) Levels of cafestol, kahweol and related diterpenoids in wild species of the coffee plant Coffea. J Agric Food Chem 45:3065–3069. DOI https://doi.org/10.1021/jf9700900

de Souza RMN, Benassi MT (2012) Discrimination of commercial roasted and ground coffee according to chemical composition. J Braz Chem Soc 23:1347–1354. DOI https://doi.org/10.1590/S0103-50532012000700020

Dedecca DM (1957) Anatomia e desenvolvimento ontogenético de Coffea arabica L. var. typica Cramer Bragantia 16. DOI https://doi.org/10.1590/S0006-87051957000100023

Dussert S, Laffargue A, de Kochko A, Joet T (2008) Effectiveness of the fatty acid and sterol composition of seeds for the chemotaxonomy of Coffea subgenus Coffea. Phytochemistry 69:2950–2960. DOI https://doi.org/10.1016/j.phytochem.2008.09.021

Finotello C, Forzato C, Gasparini A, Mammi S, Navarini L, Schievano E (2017) NMR quantification of 16-O-methylcafestol and kahweol in Coffea canephora var. robusta beans from different geographical origins. Food Control 75:62–69. DOI https://doi.org/10.1016/j.foodcont.2016.12.019

Guercia E, Colomban S, Navarini L (2020) 16-O-Methylated diterpenes in green Coffea arabica: ultrahigh-performance liquid chromatography-tandem mass spectrometry method optimization and validation. J Mass Spectrom e4636. DOI https://doi.org/10.1002/jms.4636

Gunning Y, Defernez M, Watson AD, Beadman N, Colquhoun IJ, Le Gall G, Philo M, Garwood H, Williamson D, Davis AP, Kemsley EK (2018) 16-O-methylcafestol is present in ground roast Arabica coffees: Implications for authenticity testing. Food Chem 248:52–60. DOI https://doi.org/10.1016/j.foodchem.2017.12.034

Hamon P, Siljak-Yakovlev S, Srisuwan S, Robin O, Poncet V, Hamon S, de Kochko A (2009) Physical mapping of rDNA and heterochromatin in chromosomes of 16 Coffea species: A revised view of species differentiation. Chromosome Res 17:291–304. DOI https://doi.org/10.1007/s10577-009-9033-2

Hamon P, Grover CE, Davis AP, Rakotomalala JJ, Raharimalala NE, Albert VA, Sreenath HL, Stoffelen P, Mitchell SE, Couturon E, Hamon S, de Kochko A, Crouzillat D, Rigoreau M, Sumirat U, Akaffou S, Guyot R (2017) Genotyping-by-sequencing provides the first well-resolved phylogeny for coffee (Coffea) and insights into the evolution of caffeine content in its species: GBS coffee phylogeny and the evolution of caffeine content. Mol Phylogenet Evol 109:351–361. DOI https://doi.org/10.1016/j.ympev.2017.02.009

Herrera J, Combes C, Cortina H, Alvarado G, Lashermes P (2002) Gene introgression into Coffea arabica by way of triploid hybrids (C. arabica x C. canephora). Heredity 89:488–494. DOI https://doi.org/10.1038/sj.hdy.6800171

Illy A, Viani R (2005) Espresso coffee, The science of quality. Elsevier Academic Press

Ismail I, Anuar MS, Shamsudin R (2014) Physical properties of Liberica coffee (Coffea liberica) berries and beans. Pertanika J Sci Technol 22:65–79

Kim HG, Kim JY, Hwang YP, Lee KJ, Lee KY, Kim DH, Kim DH, Jeong HG (2006) The coffee diterpenes kahweol inhibits tumor necrosis factor-α-induced expression of cell adhesion molecules in human endothelial cells. Toxicol Appl Pharmacol 217:332–341. DOI https://doi.org/10.1016/j.taap.2006.09.013

Lashermes P, Combes M-C, Ribas A, Cenci A, Mahé L, Etienne H (2010) Genetic and physical mapping of the S H 3 region that confers resistance to leaf rust in coffee tree (Coffea arabica L.). Tree Genet Genomes 6:973–980. DOI https://doi.org/10.1007/s11295-010-0306-x

Lebrun J (1941) Recherches morphologiques et systématiques sur les caféiers du Congo. Mem Inst Colon Belge Sci Tech VIII 11:1–183

Lee KJ, Choi JH, Jeong HG (2007) Hepatoprotective and antioxidant effects of the coffee diterpenes kahweol and cafestol on carbon tetrachloride-induced liver damage in mice. Food Chem Toxicol 45:2118–2125

Lucon Wagemaker TA, Limonta Carvalho CR, Borlina Maia N, Baggio SR, Guerreiro Filho O (2011) Sun protection factor, content and composition of lipid fraction of green coffee beans. Ind Crops Prod 33:469–473. DOI https://doi.org/10.1016/j.indcrop.2010.10.026

Maurin O, Davis AP, Chester M, Mvungi EF, Jaufeerally-Fakim Y, Fay MF (2007) Towards a Phylogeny for Coffea (Rubiaceae): Identifying Well-supported Lineages Based on Nuclear and Plastid DNA Sequences. Ann Bot 100:1565–1583. DOI https://doi.org/10.1093/aob/mcm257

Mendes AJT (1941) Cytological Observations in Coffea. VI. Embryo and Endosperm Development in Coffea arabica L. Am J Bot 28:784–789

Myers R, Kawabata A, Cho A, Nakamoto ST (2020) Grafted coffee increases yield and survivability. Horttechnology 30:428–432. DOI https://doi.org/10.21273/horttech04550-20

Mongrand S, Badoc A, Patouille B, Lacomblez C, Chavent M, Bessoule J-J (2005) Chemotaxonomy of the Rubiaceae family based on leaf fatty acid composition. Phytochemistry 66:549–559. DOI https://doi.org/10.1016/j.phytochem.2004.12.021

N’Diaye A, Poncet V, Louarn J, Hamon S, Noirot M (2005) Genetic differentiation between Coffea liberica var. liberica and C. liberica var. dewevrei and comparison with C. canephora. Plant Syst Evol 253:95–104. DOI https://doi.org/10.1007/s00606-005-0300-I

Prakash NS, Marques DV, Varzea VMP, Silva MC, Combes MC, Lashermes P (2004) Introgression molecular analysis of a leaf rust resistance gene from Coffea liberica into C. arabica L. Theor Appl Genet 109:1311–1317. DOI https://doi.org/10.1007/s00122-004-1748-z

Portaluri V, Thomas F, Guyader S, Jamin E, Bertrand B, Remaud GS, Schievano E, Mammi S, Guercia E, Navarini L (2020) Limited genotypic and geographic variability of 16-O-methylated diterpene content in Coffea arabica green beans. Food Chem 329:127129. DOI https://doi.org/10.1016/j.foodchem.2020.127129

Pot D, Ferreira LP, Rafael Dias CE, Durand N, Guyot B, Ramos J, Perthuis B, Sandrin P, Benassi MT, Marraccini P, Perreira Luiz FP, Leroy T, Vieira Luiz GE (2008) Genetic and molecular determinism of diterpenes metabolism in Coffea spp. Conference Paper CIRAD, 22nd International Conference on Coffee Science, 14–19 september 2008, Campinas, Brasil

Puff C, Chamchumroon V (2003) Non-indigenous Rubiaceae grown in Thailand. Thai For Bull (Bot) 31:75–94

Rao TA, Bhupal OP (1973) Typology of sclereids. Proc Indian Acad Sci 41–55

Ren Y, Wang C, Xu J, Wang S (2019) Cafestol and Kahweol: A review on their bioactivities and pharmacological properties. Int J Mol Sci 20:4238. DOI https://doi.org/10.3390/ijms20174238

Ricketts M-L (2007) Does coffee raise cholesterol? Future Lipidol 2:373–377. DOI https://doi.org/10.2217/17460875.2.4.373

Rosadi MI, Majid A, Rizal A, Ulum B, Asror K, Fu’ad M, Proyogi D, Dhani YA (2021) The Appearance of Excelsa Coffee as a Result of Exploration in Pecalukan Village, Prigen District, Pasuruan Regency. Jurnal Abdimas Berdaia 4:152–158

Salazar BM, Gunda DM, Lagrimas AJM, Santos PJA (2019) Profiling and Analysis of Reproductive Phenology of Four Coffee (Coffea spp.) Species in the Philippines using the BBCH Scale. Philipp J Crop Sci 44:10–19

Sanchez JCS, Quilang JP, Mojica RM, Cao EP (2018) Interspecific and Intraspecific Variation in Coffea sp. using Fruit Metric and Landmark-based Geomorphometric Analyses. Philipp J Sci 147:659–665

Santos DMC, Cao EP (2020) SSR Analyses of Coffea liberica var. liberica and Coffea liberica var. dewevrei in the Philippines. Philipp Agric Scientist 103:357–361

Seow LJ, Shamlan S, Seow EK (2021) Influence of roasting degrees on the antioxidant and anti-angiogenic effects of Coffea liberica. J Food Meas Charact 15:4030–4036. DOI https://doi.org/10.1007/s11694-021-00987-7

Shen T, Lee J, Lee E, Kim SH, Kim TW, Cho JY (2010) Cafestol, a coffee-Specific diterpene, is a novel extracellular signal- regulated kinase inhibitor with AP-1-Targeted inhibition of prostaglandin E2 production in lipopolysaccharide-activated macrophages. Biol Pharm Bull 33:128–132. DOI https://doi.org/10.1248/bpb.33.128

Silvestrini M, Maluf MP, Silvarolla MB, Guerreiro-Filho O, Medina-Filho HP, Vanini MTM, Oliveira AS, de Gaspari-Pezzopane C, Fazuoli LC (2008) Genetic diversity of a Coffea Germplasm Collection assessed by RAPD markers. Genet Resour Crop Evol 55:901–910. DOI https://doi.org/10.1007/s10722-007-9295-5

Urgert R, Van der Weg G, Kosmeijer-Schuil TG, Van de Bovenkamop P, Hovenier R, Katan MB (1995) Levels of the cholesterol elevating diterpenes cafestol and kahweol in various coffee brews. J Agric Food Chem 43:2167–2172. DOI https://doi.org/10.1021/jf00056a039

Viani R (1988) Physiologically Active Substances in Coffee. In: Clarke RJ, Macrae R (eds) Coffee, Elsevier Applied Science, London, New York, vol. 3

Wrigley G (1988) Coffee. Longman Scientific & Technical, Harlow, p 639

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Tropical Plant Biology

Tập 15

247-259

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