16S rRNA gene sequencing reveals the relationship between gut microbiota and ovarian development in the swimming crab Portunus trituberculatus
Tài liệu tham khảo
Ahlstranda, 2017, A novel intrinsically disordered outer membrane lipoprotein of Aggregatibacter actinomycetemcomitans binds various cytokines and plays a role in biofilm response to interleukin-1b and interleukin-8, Virulence, 8, 115, 10.1080/21505594.2016.1216294
Bäumler, 2016, Interactions between the microbiota and pathogenic bacteria in the gut, Nature, 535, 85, 10.1038/nature18849
Cargnello, 2011, Activation and function of the MAPKs and their substrates, the MAPK-activated protein kinases, Microbiol. Mol. Biol. Rev., 75, 50, 10.1128/MMBR.00031-10
Clarke, 2006
Dai, 2018, Starvation stress affects the interplay among shrimp gut microbiota, digestion and immune activities, Fish Shellfish Immunol., 80, 191, 10.1016/j.fsi.2018.05.040
Den Besten, 2014, The short-chain fatty acid uptake fluxes by mice on a guar gum supplemented diet associate with amelioration of major biomarkers of the metabolic syndrome, PloS One, 9, 10.1371/journal.pone.0107392
Derikx, 2016, Probiotics and prebiotics in ulcerative colitis, Best Pract. Res. Clin. Gastroenterol., 30, 55, 10.1016/j.bpg.2016.02.005
Doronina, 2014, Methyloversatilis thermotolerans sp. nov. a novel thermotolerant facultative methylotroph isolated from a hot spring, Int. J. Syst. Evol. Microbiol., 64, 158, 10.1099/ijs.0.055046-0
Edgar, 2013, UPARSE: highly accurate OTU sequences from microbial amplicon reads, Nat. Methods, 10, 996, 10.1038/nmeth.2604
Ferraris, 2001, Dietary and developmental regulation of intestinal sugar transport, Biochem. J., 360, 265, 10.1042/bj3600265
2019
Gensollen, 2016, How colonization by microbiota in early life shapes the immune system, Science, 352, 539, 10.1126/science.aad9378
Gu, 2017, Injury-induced rapid activation of MAPK signaling in dechorionated eggs and larvae of the silkworm Bombyx mori, Insect Sci., 24, 248, 10.1111/1744-7917.12301
Hiromitsu, 2009, Inhibition of c-Jun NH2-terminal kinase switches Smad3 signaling from oncogenesis to tumor-suppression in rat hepatocellular carcinoma, Hepatology, 49, 1944, 10.1002/hep.22860
Hooper, 2001, Commensal host-bacterial relationships in the gut, Science, 292, 1115, 10.1126/science.1058709
Kalyuzhnaya, 2006, Methyloversatilis universalis gen. nov. sp. nov. a novel taxon within the Betaproteobacteria represented by three methylotrophic isolates, Int. J. Syst. Evol. Microbiol., 56, 2517, 10.1099/ijs.0.64422-0
Kaur, 2014, Hungatella effluvii gen. nov. sp. nov. an obligately anaerobic bacterium isolated from an effluent treatment plant, and reclassification of Clostridium hathewayi as Hungatella hathewayi gen. nov. comb. nov, Int. J. Syst. Evol. Microbiol., 64, 710, 10.1099/ijs.0.056986-0
Koenig, 2011, Succession of microbial consortia in the developing infant gut microbiome, Proc. Natl. Acad. Sci. U. S. A., 108, 4578, 10.1073/pnas.1000081107
Li, 2007, Phylogenetic analysis of intestinal bacteria in the Chinese mitten crab (Eriocheir sinensis), J. Appl. Microbiol., 103, 675, 10.1111/j.1365-2672.2007.03295.x
Lu, 2012, Comparative proteomic analysis reveals insights into anoxic growth of Methyloversatilis universalis FAM5 on methanol and ethanol, Environ. Microbiol., 14, 2935, 10.1111/j.1462-2920.2012.02857.x
Mahowald, 2009, Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla, Proc. Natl. Acad. Sci. U. S. A., 106, 5859, 10.1073/pnas.0901529106
Marchesi, 2016, The gut microbiota and host health: a new clinical frontier, Gut, 65, 330, 10.1136/gutjnl-2015-309990
Natividad, 2013, Modulation of intestinal barrier by intestinal microbiota: pathological and therapeutic implications, Pharmacol. Res., 69, 42, 10.1016/j.phrs.2012.10.007
Ramsey, 2011, Metabolite cross feeding enhances virulence in a model of polymicrobial infection, PLoS Pathog., 7, 10.1371/journal.ppat.1002012
Reyon, 2012, FLASH assembly of TALENs for high-throughput genome editing, Nat. Biotechnol., 30, 460, 10.1038/nbt.2170
Ridaura, 2018, Contextual control of skin immunity and inflammation by Corynebacterium, J. Exp. Med., 215, 785, 10.1084/jem.20171079
Rosette, 1996, Ultraviolet light and osmoticstress: activation of JNK cascade through multiple growth factor and cytokine receptors, Science, 274, 1194, 10.1126/science.274.5290.1194
Roux, 2004, ERK and p38 MAPK-activated protein kinases: a family of protein kinases with diverse biological functions, Microbiol. Mol. Biol. Rev., 68, 320, 10.1128/MMBR.68.2.320-344.2004
Samuel, 2008, Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41. Proc Natl Acad Sci U S A., 105, 16767, 10.1073/pnas.0808567105
Sayaka, 2017, The gut microbiota of healthy chilean subjects reveals a high abundance of the phylum Verrucomicrobia, Front. Microbiol., 8, 1221, 10.3389/fmicb.2017.01221
Schloss, 2009, Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities, Appl. Environ. Microbiol., 75, 7537, 10.1128/AEM.01541-09
Sekirov, 2009, The role of the intestinal microbiota in enteric infection, J Physiol, 587, 4159, 10.1113/jphysiol.2009.172742
Stacy, 2014, Bacterial fight-and-flight responses enhance virulence in a polymicrobial infection, Proc. Natl. Acad. Sci. U. S. A., 111, 7819, 10.1073/pnas.1400586111
Talpur, 2012, Control of Vibrio harveyi infection in blue swimming crab, Portunus pelagicus larvae by the gut isolated lactic acid bacteria under challenge bioassay, Pak. Vet. J., 32, 408
Tan, 2014, The role of short-chain fatty acids in health and disease, Adv. Immunol., 121, 91, 10.1016/B978-0-12-800100-4.00003-9
Waite, 2014, Influence of hand rearing and bird age on the fecal microbiota of the critically endangered kakapo, Appl. Environ. Microbiol., 80, 4650, 10.1128/AEM.00975-14
Wang, 2004, SP600125, a new JNK inhibitor, protects dopaminergic neurons in the MPTP model of Parkinson’s disease, Neurosci. Res., 48, 195, 10.1016/j.neures.2003.10.012
Wang, 2007, Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy, Appl. Environ. Microbiol., 73, 5261, 10.1128/AEM.00062-07
Wang, 2011, Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease, Nature, 472, 57, 10.1038/nature09922
Wang, 2018, Bifidobacterium can mitigate intestinal immunopathology in the context of CTLA-4 blockade, Proc. Natl. Acad. Sci. U. S. A., 115, 157, 10.1073/pnas.1712901115
Wei, 2020
Wen, 2008, Innate immunity and intestinal microbiota in the development of Type 1 diabetes, Nature, 455, 1109, 10.1038/nature07336
Zhang, 2018, The JNK signaling pathway as a potential new target for depression, Chin. Sci. Bull., 63, 1998, 10.1360/N972018-00157
Zhang, 2018, SP600125 suppresses Keap1 expression and results in NRF2-mediated prevention of diabetic nephropathy, J. Mol. Endocrinol., 60, 145, 10.1530/JME-17-0260