Data Processing System (DPS) software with experimental design, statistical analysis and data mining developed for use in entomological researchInsect Science - Tập 20 Số 2 - Trang 254-260 - 2013
Qiyi Tang, Chuan‐Xi Zhang
Abstract A comprehensive but simple‐to‐use software package called DPS (Data Processing System) has been developed to execute a range of standard numerical analyses and operations used in experimental design, statistics and data mining. This program runs on standard Windows computers. Many of the functions are specific to entomological and other biological research and are not found in standard statistical software. This paper presents applications of DPS to experimental design, statistical analysis and data mining in entomology.
Age‐stage, two‐sex life tables of Bactrocera cucurbitae (Coquillett) (Diptera: Tephritidae) with a discussion on the problem of applying female age‐specific life tables to insect populationsInsect Science - Tập 19 Số 2 - Trang 263-273 - 2012
Yu‐Bing Huang, Hsin Chı
Abstract Age‐stage, two‐sex life tables of the melon fly, Bactrocera cucurbitae (Coquillett) (Diptera: Tephritidae), reared on cucumber (Cucumis sativus L.), sponge gourd (Luffa cylindrica Roem) and a carrot medium (mashed Daucus carota L. mixed with sucrose and yeast hydrolysate) were constructed under laboratory conditions at 25 ± 1°C, 65%± 0.5% relative humidity, and a photoperiod 12 : 12 h (L : D). The intrinsic rates of increase of B. cucurbitae were 0.144 6, 0.141 2 and 0.068 8 days on cucumber, sponge gourd, and carrot medium, respectively. The highest net reproduction rate was 172 offspring per fly reared on sponge gourd. The mean generation times of B. cucurbitae ranged from 34 days reared on cucumber to 56 days reared on carrot medium. The life history raw data was analyzed using the traditional female age‐specific life table and compared to results obtained using the age‐stage, two‐sex life table. When the age‐specific female life table is applied to an age‐stage‐structured two‐sex population, survival and fecundity curves will be improperly manipulated due to an inability to include variation in preadult development time. We discussed different interpretations of the relationship between the net reproductive rate and the intrinsic rate of increase to clarify possible misunderstanding in the literature.
Different headspace profiles in wild crucifer species in response to Plutella xylostella herbivory and exogenous jasmonic acid applicationInsect Science - Tập 17 Số 1 - Trang 29-37 - 2010
Pengjun Zhang, Jinping Shu, Marcel Dicke, Shu‐Sheng Liu
Abstract Although exogenous treatment of plants with jasmonic acid (JA) may result in induced responses similar to plant defences induced by herbivory, few studies have compared the details of insect herbivory and JA‐mimicked responses. We compared volatiles of two crucifer species, Cardamine impatiens and Lepidium virginicum, in response to Plutella xylostella larval feeding and exogenous application of JA, over the entire period of time when induced changes were detectable. Significant differences in the composition and timing of volatiles occurred between herbivory and JA treatments in both plants. The quantity of nitrile and isothiocyanate released in response to herbivory was significantly larger than that upon JA treatment. In each of the two plant species, most volatile components were emitted immediately upon larval feeding and their quantity dropped rapidly once feeding ceased. In contrast, the emission of volatiles in response to JA treatment lasted for a longer period of time, and the maximum emission rate was recorded 2 and 3 days after JA treatment in L. virginicum and C. impatiens respectively. These findings are discussed in the context of signal‐transduction pathways and mechanisms involved in induced emissions of plant volatiles, as well as induced defences mediated by plant volatiles.
Confidence interval of intrinsic optimum temperature estimated using thermodynamic SSI modelInsect Science - Tập 20 Số 3 - Trang 420-428 - 2013
Takaya IKEMOTO, Issei Kurahashi, Peijian Shi
AbstractThe intrinsic optimum temperature for the development of ectotherms is one of the most important factors not only for their physiological processes but also for ecological and evolutional processes. The Sharpe–Schoolfield–Ikemoto (SSI) model succeeded in defining the temperature that can thermodynamically meet the condition that at a particular temperature the probability of an active enzyme reaching its maximum activity is realized. Previously, an algorithm was developed by Ikemoto (Tropical malaria does not mean hot environments. Journal of Medical Entomology, 45, 963–969) to estimate model parameters, but that program was computationally very time consuming. Now, investigators can use the SSI model more easily because a full automatic computer program was designed by Shi et al. (A modified program for estimating the parameters of the SSI model. Environmental Entomology, 40, 462–469). However, the statistical significance of the point estimate of the intrinsic optimum temperature for each ectotherm has not yet been determined. Here, we provided a new method for calculating the confidence interval of the estimated intrinsic optimum temperature by modifying the approximate bootstrap confidence intervals method. For this purpose, it was necessary to develop a new program for a faster estimation of the parameters in the SSI model, which we have also done.
Testing the rate isomorphy hypothesis using five statistical methodsInsect Science - Tập 19 Số 1 - Trang 121-128 - 2012
Xian‐Ju Kuang, Megha N. Parajulee, Peijian Shi, Feng Ge, Fang‐Sen Xue
Abstract Organisms are said to be in developmental rate isomorphy when the proportions of developmental stage durations are unaffected by temperature. Comprehensive stage‐specific developmental data were generated on the cabbage beetle, Colaphellus bowringi Baly (Coleoptera: Chrysomelidae), at eight temperatures ranging from 16°C to 30°C (in 2°C increments) and five analytical methods were used to test the rate isomorphy hypothesis, including: (i) direct comparison of lower developmental thresholds with standard errors based on the traditional linear equation describing developmental rate as the linear function of temperature; (ii) analysis of covariance to compare the lower developmental thresholds of different stages based on the Ikemoto‐Takai linear equation; (iii) testing the significance of the slope item in the regression line of versus temperature, where p is the ratio of the developmental duration of a particular developmental stage to the entire pre‐imaginal developmental duration for one insect or mite species; (iv) analysis of variance to test for significant differences between the ratios of developmental stage durations to that of pre‐imaginal development; and (v) checking whether there is an element less than a given level of significance in the p‐value matrix of rotating regression line. The results revealed no significant difference among the lower developmental thresholds or among the aforementioned ratios, and thus convincingly confirmed the rate isomorphy hypothesis.
Clay preference and particle transport behavior of Formosan subterranean termites (Isoptera: Rhinotermitidae): A laboratory studyInsect Science - Tập 21 Số 6 - Trang 785-795 - 2014
Cai Wang, Gregg Henderson
AbstractAlthough preference and utilization of clay have been studied in many higher termites, little attention has been paid to lower termites, especially subterranean termites. The Formosan subterranean termite, Coptotermes formosanus Shiraki, can modify its habitat by using clay to fill tree cavities. Here, the biological significance of clay on C. formosanus was investigated. Choice tests showed that significantly more termites aggregated in chambers where clay blocks were provided, regardless of colony group, observation period, or nutritional condition (fed or starved). No‐choice tests showed that clay had no observable effect on survivorship, live or dry biomass, water content, and tunneling activity after 33–35 d. However, clay appeared to significantly decrease filter paper consumption (dry weight loss). Active particle (sand, paper, and clay) transport behavior was observed in both choice and no‐choice tests. When present, clay was preferentially spread on the substrate, attached to the smooth surfaces of the containers, and used to line sand tunnels. Mechanisms and potential application of clay attraction are discussed.
High‐nickel insects and nickel hyperaccumulator plants: A reviewInsect Science - Tập 16 Số 1 - Trang 19-31 - 2009
Robert S. Boyd
AbstractInsects can vary greatly in whole‐body elemental concentrations. Recent investigations of insects associated with Ni hyperaccumulator plants have identified insects with relatively elevated whole‐body Ni levels. Evaluation of the limited data available indicates that a whole‐body Ni concentration of 500 μg Ni/g is exceptional: I propose that an insect species with a mean value of 500 μg Ni/g or greater, in either larval/nymphal or adult stages, be considered a “high‐Ni insect”. Using the 500 μg Ni/g criterion, 15 species of high‐Ni insects have been identified to date from studies in Mpumalanga (South Africa), New Caledonia and California (USA). The highest mean Ni concentration reported is 3 500 μg Ni/g for nymphs of a South African Stenoscepa species (Orthoptera: Pyrgomorphidae). The majority of high‐Ni insects (66%) are heteropteran herbivores. Studies of high‐Ni insect host preference indicate they are monophagous (or nearly so) on a particular Ni hyperaccumulator plant species. Much of the Ni in bodies of these insects is in their guts (up to 66%–75%), but elevated levels have also been found in Malpighian tubules, suggesting efficient elimination as one strategy for dealing with a high‐Ni diet. Tissue levels of Ni are generally much lower than gut concentrations, but up to 1200 μg Ni/g has been reported from exuviae, suggesting that molting may be another pathway of Ni elimination. One ecological function of the high Ni concentration of these insects may be to defend them against natural enemies, but to date only one experimental test has supported this “elemental defense” hypothesis. Community‐level studies indicate that high‐Ni insects mobilize Ni into food webs but that bioaccumulation of Ni does not occur at either plant‐herbivore or herbivore‐predator steps. Unsurprisingly, Ni bioaccumulation indices are greater for high‐Ni insects compared to other insect species that feed on Ni hyperaccumulator plants. There is some evidence of Ni mobilization into food webs by insect visitors to flowers of Ni hyperaccumulator plants, but no high‐Ni insect floral visitors have been reported.
Cloning of a putative extracellular Cu/Zn superoxide dismutase and functional differences of superoxide dismutases in invasive and indigenous whitefliesInsect Science - Tập 22 Số 1 - Trang 52-64 - 2015
Gao Xianlong, Jun‐Min Li, Hongxing Xu, Gen‐Hong Yan, Min Jiu, Shu‐Sheng Liu, Xiao‐Wei Wang
AbstractSuperoxide dismutases (SODs) are a group of important antioxidant defense enzymes. In this study, a putative extracellular Cu/Zn superoxide dismutase (ecCuZnSOD) complementary DNA was cloned and characterized from the whitefly, Bemisia tabaci. Quantitative polymerase chain reaction analysis showed that the expression level of Bt‐ecCuZnSOD was more than 10‐fold higher in the invasive Middle East Asia Minor 1 (MEAM1) than in the native Asia II 3 species of the B. tabaci species complex. After exposure to low temperature (4 °C), the expression of Bt‐ecCuZnSOD gene was significantly up‐regulated in MEAM1 but not in Asia II 3. Furthermore, the expression level of B. tabaci intracellular CuZnSOD (Bt‐icCuZnSOD), Bt‐ecCuZnSOD and mitochondrial MnSOD (Bt‐mMnSOD) was compared after transferring MEAM1 and Asia II 3 whiteflies from favorable (cotton) to unfavorable host plants (tobacco). On cotton, both CuZnSOD genes were expressed at a higher level in MEAM1 compared with Asia II 3. Interestingly, after transferring onto tobacco, the expression of Bt‐ecCuZnSOD was significantly induced in Asia II 3 but not in MEAM1. On the other hand, while Bt‐mMnSOD was expressed equally in both species on cotton, Bt‐mMnSOD messenger RNA was up‐regulated in MEAM1 on tobacco. Consistently, enzymatic activity assays of CuZnSOD and MnSOD demonstrated that CuZnSOD might play an important protective role against oxidative stress in Asia II 3, whereas MnSOD activation was critical for MEAM1 whiteflies during host adaptation. Taken together, our results suggest that the successful invasion of MEAM1 is correlated with its constitutive high activity of CuZnSOD and inducible expression of MnSOD under stress conditions.
Molecular mechanisms of heavy metal tolerance and evolution in invertebratesInsect Science - Tập 16 Số 1 - Trang 3-18 - 2009
Thierry Janssens, Dick Roelofs, Nico M. van Straalen
AbstractFollowing the genomics revolution, our knowledge of the molecular mechanisms underlying defenses against stress has been greatly expanded. Under strong selective pressure many animals may evolve an enhanced stress tolerance. This can be achieved by altering the structure of proteins (through mutations in the coding regions of genes) or by altering the amount of protein (through changes in transcriptional regulation). The latter type of evolution can be achieved by substitutions in the promoter of the gene of interest (cis‐regulatory change) or by altering the structure or amount of transcriptional regulator proteins (trans‐regulatory change). The metallothionein system is one of the best studied stress response systems in the context of heavy metals. Metallothionein expression is assumed to be regulated by metal transcription factor 1 (MTF‐1); however, up to now the involvement of MTF‐1 has only been proven for some vertebrates and Drosophila. Data on invertebrates such as nematodes and earthworms suggest that other mechanisms of metallothionein induction may be present. A detailed study of Cd tolerance was done for a species of soil‐living springtail, Orchesella cincta. The metallothionein gene of this species is overexpressed in metal‐exposed field populations. Analysis of the metallothionein promoter has demonstrated extensive polymorphisms that have a functional significance, as shown in bioreporter assays. In a study comparing 20 different populations, the frequency of a high‐expresser promoter allele was positively correlated with the concentration of metals in soil, especially Cd. The springtail study shows that cis‐regulatory change of genes involved in the cellular stress response may contribute to evolution of metal tolerance.