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Cladistics

SCIE-ISI SCOPUS (1985-2023)

  0748-3007

 

 

Cơ quản chủ quản:  WILEY , Wiley-Blackwell Publishing Ltd

Lĩnh vực:
Ecology, Evolution, Behavior and Systematics

Các bài báo tiêu biểu

TNT, a free program for phylogenetic analysis
Tập 24 Số 5 - Trang 774-786 - 2008
Pablo A. Goloboff, James S. Farris, Kevin C. Nixon
AbstractThe main features of the phylogeny program TNT are discussed. Windows versions have a menu interface, while Macintosh and Linux versions are command‐driven. The program can analyze data sets with discrete (additive, non‐additive, step‐matrix) as well as continuous characters (evaluated with Farris optimization). Effective analysis of large data sets can be ...... hiện toàn bộ
TESTING SIGNIFICANCE OF INCONGRUENCE
Tập 10 Số 3 - Trang 315-319 - 1994
James S. Farris, Mari Källersjö, Arnold G. Kluge, Carol J. Bult
SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information
Tập 27 Số 2 - Trang 171-180 - 2011
Gaurav Vaidya, David J. Lohman, Rudolf Meier
TNT version 1.5, including a full implementation of phylogenetic morphometrics
Tập 32 Số 3 - Trang 221-238 - 2016
Pablo A. Goloboff, Santiago A. Catalano
AbstractVersion 1.5 of the computer program TNT completely integrates landmark data into phylogenetic analysis. Landmark data consist of coordinates (in two or three dimensions) for the terminal taxa; TNT reconstructs shapes for the internal n...... hiện toàn bộ
A review of long‐branch attraction
Tập 21 Số 2 - Trang 163-193 - 2005
Johannes Bergsten
AbstractThe history of long‐branch attraction, and in particular methods suggested to detect and avoid the artifact to date, is reviewed. Methods suggested to avoid LBA‐artifacts include excluding long‐branch taxa, excluding faster evolving third codon positions, using inference methods less sensitive to LBA such as likelihood, the Aguinaldo et al. approach, sampli...... hiện toàn bộ
COULD A CLADOGRAM THIS SHORT HAVE ARISEN BY CHANCE ALONE?: ON PERMUTATION TESTS FOR CLADISTIC STRUCTURE
Tập 7 Số 1 - Trang 1-28 - 1991
Daniel P. Faith, Peter S. Cranston
Abstract Absolute criteria for evaluating cladistic analyses are useful, not only because cladistic algorithms impose structure, but also because applications of cladistic results demand some assessment of the degree of corroboration of the cladogram. Here, a means of quantitative evaluation is presented based on tree length. The length of the most‐parsimonious tree...... hiện toàn bộ
Logical basis for morphological characters in phylogenetics
Tập 23 Số 6 - Trang 565-587 - 2007
Paul C. Sereno
AbstractSystematists have questioned the distinction between characters and character states and their alignment with the traditional concept of homology. Previous definitions for character and character state show surprising variation. Here it is concluded that characters are simply features expressed as independent variables and ... hiện toàn bộ
HEADS AND TAILS: A CHORDATE PHYLOGENY
Tập 2 Số 4 - Trang 201-256 - 1986
John G. Maisey
Abstract— A cladistic analysis of chordates is presented, based on some 320 nested characters. All the principal higher taxa are defined by synapomorphies, including extinct acanthodians and placoderms. The data base draws broadly from adult anatomy (including osteological data for Recent and fossil taxa), embryology, physiology, and biochemistry. A conventional sequ...... hiện toàn bộ
On character coding for phylogeny reconstruction
Tập 11 Số 3 - Trang 309-315 - 1995
Fredrik Pleijel
A combined approach to the phylogeny of Cephalopoda (Mollusca)
Tập 20 Số 5 - Trang 454-486 - 2004
Annie R. Lindgren, Gonzalo Giribet, Michele K. Nishiguchi
AbstractCephalopoda represents a highly diverse group of molluscs, ranging in habitat from coastal regions to deep benthic waters. While cephalopods remain at the forefront of modern biology, in providing insight into fields such as neurobiology and population genetics, little is known about the relationships within the group. This study provides a comprehensive ph...... hiện toàn bộ