The neuropeptides and protein hormones of the agricultural pest fruit fly Bactrocera dorsalis: What do we learn from the genome sequencing and tissue-specific transcriptomes?

Altstein, 2001, Insect neuropeptide antagonists, Biopolymers, 60, 460, 10.1002/1097-0282(2001)60:6<460::AID-BIP10181>3.0.CO;2-Y Altstein, 2010, Neuropeptide signaling in insects, Adv. Exp. Med. Biol., 692, 155, 10.1007/978-1-4419-6902-6_8 Baggerman, 2002, Peptidomics of the larval Drosophila melanogaster central nervous system, J. Biol. Chem., 277, 40368, 10.1074/jbc.M206257200 Benelli, 2014, Sexual communication and related behaviours in tephritidae: current knowledge and potential applications for integrated pest management, J. Pest Sci., 87, 385, 10.1007/s10340-014-0577-3 Boerjan, 2010, Mass spectrometric profiling of (neuro)-peptides in the worker honeybee, Apis mellifera, Neuropharmacology, 58, 248, 10.1016/j.neuropharm.2009.06.026 Broeck, 2001, Neuropeptides and their precursors in the fruitfly, Drosophila melanogaster, Peptides, 22, 241, 10.1016/S0196-9781(00)00376-4 Cameron, 2007, A mitochondrial genome phylogeny of diptera: whole genome sequence data accurately resolve relationships over broad timescales with high precision, Syst. Entomol., 32, 40, 10.1111/j.1365-3113.2006.00355.x Chen, 2015, Isoform-specific expression of the neuropeptide orcokinin in Drosophila melanogaster, Peptides, 68, 50, 10.1016/j.peptides.2015.01.002 Chen, 1988, A male accessory-gland peptide that regulates reproductive-behavior of female Drosophila Melanogaster, Cell, 54, 291, 10.1016/0092-8674(88)90192-4 Clarke, 2005, Invasive phytophagous pests arising through a recent tropical evolutionary radiation: the Bactrocera dorsalis complex of fruit flies, Annu. Rev. Entomol., 50, 293, 10.1146/annurev.ento.50.071803.130428 Dierick, 2007, Serotonin and neuropeptide F have opposite modulatory effects on fly aggression, Nat. Genet., 39, 678, 10.1038/ng2029 Fournier, 1994, Effects of 2 neuronal antidiuretic molecules, neuroparsin and 5-hydroxytryptamine, on cytosolic-free calcium monitored with indo-1 in epithelial and muscular cells of the African locust rectum, BBA-Mol. Cell Res., 1220, 181 Galikova, 2015, Energy homeostasis control in Drosophila adipokinetic hormone mutants, Genetics, 201, 665, 10.1534/genetics.115.178897 Girardie, 1989, Amino-acid sequence of locust neuroparsins, FEBS Lett., 245, 4, 10.1016/0014-5793(89)80179-6 Girardie, 1998, Isolation, sequence determination, physical and physiological characterization of the neuroparsins and ovary maturing parsins of Schistocerca gregaria, Insect Biochem. Mol. Biol., 28, 641, 10.1016/S0965-1748(98)00053-8 Gui, 2017, Molecular characterizations of natalisin and its roles in modulating mating in the oriental fruit fly, Bactrocera dorsalis (Hendel), Insect Mol. Biol., 26, 103, 10.1111/imb.12274 Gui, 2017, Role of a tachykinin-related peptide and its receptor in modulating the olfactory sensitivity in the oriental fruit fly, Bactrocera dorsalis (Hendel), Insect Biochem. Mol. Biol., 80, 71, 10.1016/j.ibmb.2016.12.002 He, 2013, Regulation of sleep by neuropeptide Y-like system in Drosophila melanogaster, PLoS One, 2013 Hermann, 2012, immunoreactive clock neurons modify evening locomotor activity and free-running period in Drosophila melanogaster, J. Comp. Neurol., 520, 970, 10.1002/cne.22742 Hewes, 2001, Neuropeptides and neuropeptide receptors in the Drosophila melanogaster genome, Genome Res., 11, 1126, 10.1101/gr.169901 Hou, 2017, A role of corazonin receptor in larval-pupal transition and pupariation in the oriental fruit fly Bactrocera dorsalis (Hendel) (Diptera: tephritidae), Front. Physiol., 8, 77, 10.3389/fphys.2017.00077 Huybrechts, 2010, Neuropeptide and neurohormone precursors in the pea aphid, Acyrthosiphon pisum, Insect Mol. Biol., 19, 87, 10.1111/j.1365-2583.2009.00951.x Ida, 2011, Identification of the endogenous cysteine-rich peptide trissin, a ligand for an orphan G protein-coupled receptor in Drosophila, Biochem. Biophys. Res. Commun., 414, 44, 10.1016/j.bbrc.2011.09.018 Jiang, 2017, The short neuropeptide F modulates olfactory sensitivity of Bactrocera dorsalis upon starvation, J. Insect Physiol., 99, 78, 10.1016/j.jinsphys.2017.03.012 Jiang, 2013, Natalisin, a tachykinin-like signaling system, regulates sexual activity and fecundity in insects, Proc. Natl. Acad. Sci. U. S. A., 110, E3526, 10.1073/pnas.1310676110 Jin, 2011, Insecticide resistance of the oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: tephritidae), in mainland China, Pest Manag. Sci., 67, 370, 10.1002/ps.2076 Jung, 2014, Identification of a novel insect neuropeptide, CNMa and its receptor, FEBS Lett., 588, 2037, 10.1016/j.febslet.2014.04.028 Kim, 2010, MIPs are ancestral ligands for the sex peptide receptor, Proc. Natl. Acad. Sci. U. S. A., 107, 6520, 10.1073/pnas.0914764107 Krupp, 2013, Pigment-dispersing factor modulates pheromone production in clock cells that influence mating in Drosophila, Neuron, 79, 54, 10.1016/j.neuron.2013.05.019 Larkin, 2007, Clustal W and clustal x version 2.0, Bioinformatics, 23, 2947, 10.1093/bioinformatics/btm404 Lee, 2006, Sex- and clock-controlled expression of the neuropeptide F gene in Drosophila, Proc. Natl. Acad. Sci. U. S. A., 103, 12580, 10.1073/pnas.0601171103 Li, 2008, Genomics, transcriptomics, and peptidomics of neuropeptides and protein hormones in the red flour beetle Tribolium castaneum, Genome Res., 18, 113, 10.1101/gr.6714008 Liu, 2016, Identification of male- and female-specific olfaction genes in antennae of the oriental fruit fly (Bactrocera dorsalis), PLoS One, 11, e0147783, 10.1371/journal.pone.0147783 Nachman, 2011, Biostable multi-aib analogs of tachykinin-related peptides demonstrate potent oral aphicidal activity in the pea aphid Acyrthosiphon pisum (Hemiptera: aphidae), Peptides, 32, 587, 10.1016/j.peptides.2010.09.013 Nassel, 2011, A comparative review of short and long neuropeptide F signaling in invertebrates: any similarities to vertebrate neuropeptide Y signaling, Peptides, 32, 1335, 10.1016/j.peptides.2011.03.013 Nassel, 2010, Drosophila neuropeptides in regulation of physiology and behavior, Prog. Neurobiol., 92, 42, 10.1016/j.pneurobio.2010.04.010 Peng, 2005, Drosophila sex-peptide stimulates female innate immune system after mating via the Toll and Imd pathways, Curr. Biol., 15, 1690, 10.1016/j.cub.2005.08.048 Petersen, 2011, SignalP 4.0: discriminating signal peptides from transmembrane regions, Nat. Methods., 8, 785, 10.1038/nmeth.1701 Rexhepaj, 2003, The sex-peptide DUP99B is expressed in the male ejaculatory duct and in the cardia of both sexes, FEBS J., 270, 4306 Riehle, 2002, Neuropeptides and peptide hormones in Anopheles gambiae, Science, 298, 172, 10.1126/science.1076827 Roller, 2008, The unique evolution of neuropeptide genes in the silkworm Bombyx mori, Insect Biochem. Mol. Biol., 38, 1147, 10.1016/j.ibmb.2008.04.009 Saudan, 2002, Ductus ejaculatorius peptide 99B (DUP99B), a novel Drosophila melanogaster sex-peptide pheromone, FEBS J., 269, 989 Schoofs, 2017, Neuropeptides as regulators of behavior in insects, Annu. Rev. Entomol., 62, 35, 10.1146/annurev-ento-031616-035500 Shen, 2013, In silico cloning and annotation of genes involved in the digestion, detoxification and RNA interference mechanism in the midgut of Bactrocera dorsalis [Hendel (Diptera: tephritidae)], Insect Mol. Biol., 22, 354, 10.1111/imb.12026 Smagghe, 2010, Antifeedant activity and high mortality in the pea aphid Acyrthosiphon pisum (Hemiptera: aphidae) induced by biostable insect kinin analogs, Peptides, 31, 498, 10.1016/j.peptides.2009.07.001 Stephens, 2007, The current and future potential geographical distribution of the oriental fruit fly, Bactrocera dorsalis (Diptera: tephritidae), Bull. Entomol. Res., 97, 369, 10.1017/S0007485307005044 Trapnell, 2009, TopHat: discovering splice junctions with RNA-Seq, Bioinformatics, 25, 1105, 10.1093/bioinformatics/btp120 Trapnell, 2012, Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks, Nat. Protoc., 7, 562, 10.1038/nprot.2012.016 Ugrankar, 2015, Drosophila glucome screening identifies Ck1alpha as a regulator of mammalian glucose metabolism, Nat. Commun., 6, 10.1038/ncomms8102 Veenstra, 2000, Mono- and dibasic proteolytic cleavage sites in insect neuroendocrine peptide precursors, Arch. Insect Biochem. Physiol., 43, 49, 10.1002/(SICI)1520-6327(200002)43:2<49::AID-ARCH1>3.0.CO;2-M Veenstra, 2010, What the loss of the hormone neuroparsin in the melanogaster subgroup of Drosophila can tell us about its function, Insect Biochem. Mol., 40, 354, 10.1016/j.ibmb.2010.03.001 Veenstra, 2011, Neuropeptide evolution: neurohormones and neuropeptides predicted from the genomes of Capitella teleta and Helobdella robusta, Gen. Comp. Endocrinol., 171, 160, 10.1016/j.ygcen.2011.01.005 Veenstra, 2012, In silico cloning of genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors in a spider mite, Insect Biochem. Mol. Biol., 42, 277, 10.1016/j.ibmb.2011.12.009 Verleyen, 2006, Identification of new immune induced molecules in the haemolymph of Drosophila melanogaster by 2D-nanoLC MS/MS, J. Insect Physiol., 52, 379, 10.1016/j.jinsphys.2005.12.007 Wei, 2015, Transcriptome profiling of the testis reveals genes involved in spermatogenesis and marker discovery in the oriental fruit fly, Bactrocera dorsalis, Insect Mol. Biol., 24, 41, 10.1111/imb.12134 Wei, 2016, Transcriptome analysis to identify genes for peptides and proteins involved in immunity and reproduction from male accessory glands and ejaculatory duct of Bactrocera dorsalis, Peptides, 80, 48, 10.1016/j.peptides.2015.08.007 Wiegmann, 2011, Episodic radiations in the fly tree of life, Proc. Natl. Acad. Sci. U. S. A, 108, 5690, 10.1073/pnas.1012675108 Yang, 2014, De novo cloning and annotation of genes associated with immunity, detoxification and energy metabolism from the fat body of the oriental fruit fly, bactrocera dorsalis, PLoS One, 9, e94470, 10.1371/journal.pone.0094470 Yu, 2013, Analogs of sulfakinin-related peptides demonstrate reduction in food intake in the red flour beetle, Tribolium castaneum, while putative antagonists increase consumption, Peptides, 41, 107, 10.1016/j.peptides.2012.12.005 Zhang, 2011, Disruption of insect diapause using agonists and an antagonist of diapause hormone, Proc. Natl. Acad. Sci. U. S. A., 108, 16922, 10.1073/pnas.1113863108