The Catalytic Domain of Escherichia coli Lon Protease Has a Unique Fold and a Ser-Lys Dyad in the Active Site

Journal of Biological Chemistry - Tập 279 Số 9 - Trang 8140-8148 - 2004
Istvan Botos1, Edward E. Melnikov2, Scott Cherry1, Joseph E. Tropea1, Anna G. Khalatova2, Fatima Rasulova3, Zbigniew Dauter1, Michael R. Maurizi3, Т. В. Ротанова2, Alexander Wlodawer1, Alla Gustchina1
1Macromolecular Crystallography Laboratory, National Cancer Institute at Frederick, Frederick, Maryland 21702-1201
2Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997
3Laboratory of Cell Biology, National Cancer Institute, Bethesda, Maryland 20892

Tóm tắt

Từ khóa


Tài liệu tham khảo

Wickner, 1999, Science, 286, 1888, 10.1126/science.286.5446.1888

Gottesman, 1997, Genes Dev., 11, 815, 10.1101/gad.11.7.815

Goldberg, 1992, Eur. J. Biochem., 203, 9, 10.1111/j.1432-1033.1992.tb19822.x

Gottesman, 1992, Microbiol. Rev., 56, 592, 10.1128/MR.56.4.592-621.1992

Swamy, 1981, Nature, 292, 652, 10.1038/292652a0

Goldberg, 1981, Methods Enzymol., 80, 680, 10.1016/S0076-6879(81)80052-3

Charette, 1981, Proc. Natl. Acad. Sci. U. S. A., 78, 4728, 10.1073/pnas.78.8.4728

Goldberg, 1994, Methods Enzymol., 244, 350, 10.1016/0076-6879(94)44027-1

Amerik, 1990, Bioorgan. Khim., 16, 869

Gottesman, 1995, Cold Spring Harb. Symp. Quant. Biol., 60, 533, 10.1101/SQB.1995.060.01.057

Rotanova, 1999, Bioorgan. Khim., 25, 883

Rasulova, 1998, FEBS Lett., 432, 179, 10.1016/S0014-5793(98)00859-X

van Dijl, 1998, Proc. Natl. Acad. Sci. U. S. A., 95, 10584, 10.1073/pnas.95.18.10584

Ovchinnikova, 1998, Biomed. Tekhnol., 8, 62

Vasilyeva, 2002, FEBS Lett., 526, 66, 10.1016/S0014-5793(02)03117-4

Roudiak, 1998, Biochemistry, 37, 11255, 10.1021/bi980945h

Gottesman, 1996, Annu. Rev. Genet., 30, 465, 10.1146/annurev.genet.30.1.465

Frank, 1996, Proc. Natl. Acad. Sci. U. S. A., 93, 10291, 10.1073/pnas.93.19.10291

Neuwald, 1999, Genome Res., 9, 27, 10.1101/gr.9.1.27

Lupas, 2002, Curr. Opin. Struct. Biol., 12, 746, 10.1016/S0959-440X(02)00388-3

Maurizi, 2001, EMBO Rep., 2, 980, 10.1093/embo-reports/kve229

Lupas, 1997, Trends Biochem. Sci., 22, 399, 10.1016/S0968-0004(97)01117-1

Zwickl, 2000, Curr. Opin. Struct. Biol., 10, 242, 10.1016/S0959-440X(00)00075-0

Stahlberg, 1999, Proc. Natl. Acad. Sci. U. S. A., 96, 6787, 10.1073/pnas.96.12.6787

Krzywda, 2002, Structure, 10, 1073, 10.1016/S0969-2126(02)00806-7

Niwa, 2002, Structure, 10, 1415, 10.1016/S0969-2126(02)00855-9

Botos, 2003, J. Struct. Biol.

Wang, 1997, Cell, 91, 447, 10.1016/S0092-8674(00)80431-6

Yoo, 1997, FEBS Lett., 412, 57, 10.1016/S0014-5793(97)00742-4

Tomoyasu, 1995, EMBO J., 14, 2551, 10.1002/j.1460-2075.1995.tb07253.x

Amerik, 1991, FEBS Lett., 287, 211, 10.1016/0014-5793(91)80053-6

Starkova, 1998, FEBS Lett., 422, 218, 10.1016/S0014-5793(98)00012-X

Birghan, 2000, EMBO J., 19, 114, 10.1093/emboj/19.1.114

Rotanova, 2003, Bioorgan. Khim., 29, 97

Rotanova, 1994, Bioorgan. Khim., 20, 114

Doublie, 1997, Methods Enzymol., 276, 523, 10.1016/S0076-6879(97)76075-0

Gill, 1989, Anal. Biochem., 182, 319, 10.1016/0003-2697(89)90602-7

Jancarik, 1991, J. Appl. Crystallogr., 21, 916

McPherson, 1982

Otwinowski, 1997, Methods Enzymol., 276, 307, 10.1016/S0076-6879(97)76066-X

Terwilliger, 2001, Acta Crystallogr. Sect. D Biol. Crystallogr., 57, 1763, 10.1107/S0907444901013749

Jones, 1997, Methods Enzymol., 277, 173, 10.1016/S0076-6879(97)77012-5

Brünger, 1998, Acta Crystallogr. Sect. D Biol. Crystallogr., 54, 905, 10.1107/S0907444998003254

Brünger, 1990, Acta Crystallogr. Sect. A, 46, 585, 10.1107/S0108767390002355

Engh, 1991, Acta Crystallogr. Sect. A, 47, 392, 10.1107/S0108767391001071

Sheldrick, 1997, Methods Enzymol., 277, 319, 10.1016/S0076-6879(97)77018-6

Brünger, 1992, Nature, 355, 472, 10.1038/355472a0

Schomaker, 1968, Acta Crystallogr. Sect. B Struct. Crystallogr. Cryst. Chem., 24, 63, 10.1107/S0567740868001718

Holm, 1993, J. Mol. Biol., 233, 123, 10.1006/jmbi.1993.1489

Yeates, 1997, Methods Enzymol., 276, 344, 10.1016/S0076-6879(97)76068-3

1994, Acta Crystallogr. Sect. D Biol. Crystallogr., 50, 760, 10.1107/S0907444994003112

Ramachandran, 2002, Proc. Natl. Acad. Sci. U. S. A., 99, 7396, 10.1073/pnas.102188799

Kwon, 2003, J. Mol. Biol., 330, 185, 10.1016/S0022-2836(03)00580-1

Paetzel, 2002, J. Biol. Chem., 277, 9512, 10.1074/jbc.M110983200

Luo, 2001, Cell, 106, 585, 10.1016/S0092-8674(01)00479-2

Peat, 1996, Nature, 380, 727, 10.1038/380727a0

Bell, 2000, Cell, 101, 801, 10.1016/S0092-8674(00)80891-0

Dodson, 1998, Trends Biochem. Sci., 23, 347, 10.1016/S0968-0004(98)01254-7

Klenotic, 2000, J. Biol. Chem., 275, 6490, 10.1074/jbc.275.9.6490

Kraut, 1977, Annu. Rev. Biochem., 46, 331, 10.1146/annurev.bi.46.070177.001555

Bode, 1987, Eur. J. Biochem., 166, 673, 10.1111/j.1432-1033.1987.tb13566.x

Frigerio, 1992, J. Mol. Biol., 225, 107, 10.1016/0022-2836(92)91029-O

Wlodawer, 2001, Nat. Struct. Biol., 8, 442, 10.1038/87610

Wlodawer, 2003, Acta Biochim. Polon., 50, 81, 10.18388/abp.2003_3716

James, 1994, 1

Paetzel, 1998, Nature, 396, 186, 10.1038/24196

Esnouf, 1997, J. Mol. Graph. Model., 15, 132, 10.1016/S1093-3263(97)00021-1

Meritt, 1994, Acta Crystallogr. Sect. D Biol. Crystallogr., 50, 869, 10.1107/S0907444994006396

Christopher, 1998

Nicholls, 1992