The 3,000 rice genomes project: new opportunities and challenges for future rice research

Oxford University Press (OUP) - Tập 3 Số 1 - 2014
Jiayang Li1, Jun Wang2, R. S. Zeigler3
1Chinese Academy of Agricultural Sciences, 12 S. Zhong-Guan-Cun St, Beijing 100081, China
2BGI, Bei Shan Industrial Zone, Yantian District, Shenzhen 518083, China
3International Rice Research Institute, DAPO 7777, Metro Manila 1301, Philippines

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Tài liệu tham khảo

IRGSP (International Rice Genome Sequencing Project): The map-based sequence of the rice genome. Nature. 2005, 436: 793-800. 10.1038/nature03895.

Hirochika H, Guiderdoni E, An G, Hsing YI, Eun MY, Han CD, Upadhyaya N, Ramachandran S, Zhang Q, Pereira A, Sundaresan V, Leung H: Rice mutant resources for gene discovery. Plant Mol Biol. 2004, 54: 325-334.

Zhang QF, Li JY, Xue YB, Han B, Deng XW: Rice 2020: a call for an international coordinated effort in rice functional genomics. Mol Plant. 2010, 1: 715-719.

International rice genebank collection. http://irri.org/our-work/seeds .

China national crop genebank. http://icgr.caas.net.cn/cgris_english.html .

Yu SB, Xu WJ, Vijayakumar CHM, Ali J, Fu BY, Xu JL, Marghirang R, Domingo J, Jiang YZ, Aquino C, Virmani SS, Li ZK: Molecular diversity and multilocus organization of the parental lines used in the international rice molecular breeding program. Theor Appl Genet. 2003, 108: 131-140. 10.1007/s00122-003-1400-3.

Li ZK, Zhang F: Rice breeding in the post-genomics era: from concept to practice. Curr Opin Plant Biol. 2013, 16: 1-9. 10.1016/j.pbi.2013.01.002.

Zhang HL, Zhang DL, Wang MX, Sun JL, Qi YW, Li JJ, Wei XH, Han LZ, Qiu ZG, Tang SX, Li ZC: A core collection and mini core collection of Oryza sativa L in China. Theor Appl Genet. 2011, 122: 49-61. 10.1007/s00122-010-1421-7.

The 3,000 Rice Genomes Project: The 3,000 rice genomes project. GigaScience. 2014, 3: 7

McNally KL: Exploring ‘omics’ of Genetic Resources to Mitigate the Effects of Climate Change. Plant Genetic Resources and Climate Change, Chapter 10. Edited by: Jackson M, Ford-Lloy B, Parry M. 2014, Oxfordshire, UK: CABI Climate Change Series, 16-189.

McCouch S, McNally KL, Wang W, Hamilton RS: Genomics of gene banks: a case study in rice. Am J Bot. 2012, 99: 407-423. 10.3732/ajb.1100385.

International Arabidopsis Informatics Consortium: An international bioinformatics infrastructure to underpin the Arabidopsis community. Plant Cell. 2010, 22: 2530-2536.