Sequence databases and homology searching using the World Wide Web

Molecular Medicine Today - Tập 2 - Trang 98-102 - 1996
Morris Paterson1
1Department of Medicine, St Mary's Hospital Medical School, Imperial College, Norfolk Place, London, UK W2 1PG, UK Tel: +44 171 725 6417 Fax: +44 171 724 9369

Tài liệu tham khảo

Pearson, 1988, Improved tools for biological sequence comparison, 85, 2444 Altschul, 1990, Basic local alignment search tool, J. Mol. Biol., 215, 403, 10.1016/S0022-2836(05)80360-2 Sonnhammer, 1994, The modular arrangement of proteins as inferred from analysis of homology, Protein Sci., 3, 482, 10.1002/pro.5560030314 Bairoch, 1994, PROSITE: recent developments, Nucleic Acids Res., 22, 3583 Bernstein, 1977, The Protein Data Bank: a computer-based archival file for macromolecular structures, J. Mol. Biol., 112, 535, 10.1016/S0022-2836(77)80200-3 Sander, 1991, Database of homology-derived protein structures and the structural meaning of sequence alignment, Proteins, 9, 56, 10.1002/prot.340090107 Holm, 1993, Protein structure comparison by alignment of distance matrices, J. Mol. Biol., 233, 123, 10.1006/jmbi.1993.1489 Holm, 1994, The FSSP database of structurally aligned protein fold families, Nucleic Acids Res., 22, 3600 Murzin, 1995, scop: a structural classification of proteins database for the investigation of sequences and structures, J. Mol. Biol., 247, 536, 10.1016/S0022-2836(05)80134-2