Ribosomal DNA Sequence Variation among Sympatric Strains of the Cyclotella meneghiniana Complex (Bacillariophyceae) Reveals Cryptic Diversity

Álvarez, 2003, Ribosomal ITS sequences and plant phylogenetic inference, Mol Phylogenet Evol, 29, 417, 10.1016/S1055-7903(03)00208-2

Beszteri, 2005, Conventional and geometric morphometric studies of valve ultrastructural variation in two closely related Cyclotella species (Bacillariophyceae), Eur J Phycol, 40, 89, 10.1080/09670260500050026

Bourne CEM (1992) Chloroplast DNA structure, variation and phylogeny in closely related species of Cyclotella. PhD Dissertation, University of Michigan

Bourne, 1992, Organization of the chloroplast genome of the freshwater centric diatom Cyclotella meneghiniana, J Phycol, 28, 347, 10.1111/j.0022-3646.1992.00347.x

Büchel, 2003, Fucoxanthin–chlorophyll proteins in diatoms: 18 and 19kDa subunits assemble into different oligomeric states, Biochemistry, 42, 13027, 10.1021/bi0349468

Clark, 1990, Inference of haplotypes from PCR-amplified samples of diploid populations, Mol Biol Evol, 7, 111

Coleman, 2000, The significance of a coincidence between evolutionary landmarks found in mating affinity and a DNA sequence, Protist, 151, 1, 10.1078/1434-4610-00002

De Vargas, 2004, Super-Species in the Calcareous Plankton, 271

De Vargas, 1999, Molecular evidence of cryptic speciation in planktonic foraminifers and their relation to oceanic provinces, Proc Natl Acad Sci USA, 96, 2864, 10.1073/pnas.96.6.2864

Doyle, 1990, Isolation of plant DNA from fresh tissue, Focus, 12, 13

Drebes, 1977, Sexuality, 250

Elwood, 1985, The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata, Mol Biol Evol, 2, 399

Excoffier, 1992, Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data, Genetics, 131, 479, 10.1093/genetics/131.2.479

Finlay, 2002, Hypothesis: the rate and scale of dispersal of freshwater diatom species is a function of their global abundance, Protist, 153, 261, 10.1078/1434-4610-00103

Håkansson, 1990, Cyclotella meneghiniana Kütz. (Bacillariophyceae), its morphology and reappraisal of similar species, Nova Hedw Beih, 100, 19

Håkansson, 1998, Phenotypic plasticity in the diatom Cyclotella meneghiniana or a new species? Nova Hedw, 66, 187

Håkansson, 2002, A compilation and evaluation of species in the genera Stephanodiscus, Cyclostephanos and Cyclotella with a new genus in the family Stephanodiscaceae, Diatom Res, 17, 1, 10.1080/0269249X.2002.9705534

Håkansson, 1999, A study of variation in valve morphology of the diatom Cyclotella meneghiniana in monoclonal cultures: effect of auxospore formation and different salinity conditions, Diatom Res, 14, 251, 10.1080/0269249X.1999.9705469

Iyengar, 1944, On reduction division and auxospore formation in Cyclotella meneghiniana Kütz, J Ind Bot Sci, 23, 125

Kumar, 2001

Lewandowska, 2004, Effect of iron limitation on cells of the diatom Cyclotella meneghiniana Kützing, Oceanologia, 46, 269

Lole, 1999, Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination, J Virol, 73, 152, 10.1128/JVI.73.1.152-160.1999

Louda, 2002, Senescence- and death-related alteration of chlorophylls and carotenoids in marine phytoplankton, Org Geochem, 33, 1635, 10.1016/S0146-6380(02)00106-7

Lundholm, 2003, A study of the Pseudo-nitzschia pseudodelicatissima/cuspidata complex (Bacillariophyceae): what is P. pseudodelicatissima?, J Phycol, 39, 797, 10.1046/j.1529-8817.2003.02031.x

Mann, 1999, The species concept in diatoms, Phycologia, 38, 437, 10.2216/i0031-8884-38-6-437.1

Medlin, 1997, Can molecular techniques help define species limits?, Diatom, 13, 19

Medlin, 1988, The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions, Gene, 71, 491, 10.1016/0378-1119(88)90066-2

Medlin, 1991, Morphological and genetic variation within the diatom Skeletonema costatum (Bacillariophyceae): evidence for a new species, Skeletonema pseudocostatum, J Phycol, 27, 514, 10.1111/j.0022-3646.1991.00514.x

Medlin, 1996, Evolution of the diatoms (Bacillariophyta): III. Molecular evidence for the origin of the Thalassiosirales, Nova Hedw Beih, 112, 221

Millie, 1986, Nutrient-limitation effects on the biochemical composition of Cyclotella meneghiniana (Bacillariophyta): an experimental and statistical analysis, Can J Bot, 64, 19, 10.1139/b86-005

Montresor, 2003, Intraspecific diversity in Scrippsiella trochoidea (Dinophyceae): evidence or cryptic species, Phycologia, 42, 56, 10.2216/i0031-8884-42-1-56.1

Posada, 1998

Rao, 1971, Studies on Cyclotella meneghiniana Kütz, II: induction of auxospore formation, Phykos, 10, 84

Rao, 1996, Size dependent reproductive behaviour in Cyclotella meneghiniana (Bacillariophyta), Nova Hedw Beih, 112, 235

Sáez, 2005, Body doubles, Nature, 433, 111, 10.1038/433111a

Sáez, 2003, Pseudo-cryptic speciation in coccolithophores, Proc Natl Acad Sci USA, 100, 7163, 10.1073/pnas.1132069100

Salminen, 1995, Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning, AIDS Res Hum Retroviruses, 11, 1423, 10.1089/aid.1995.11.1423

Sarno, 2005, Diversity in the genus Skeletonema (Bacillariophyceae), II: an assessment of the taxonomy of S. costatum-like species with the description of four new species, J Phycol, 41, 151, 10.1111/j.1529-8817.2005.04067.x

Scholin, 1994, Identification of group- and strain-specific genetic markers for globally distributed Alexandrium (Dinophyceae). 2. Sequence analysis of a aragment of the LSU rRNA gene, J Phycol, 30, 999, 10.1111/j.0022-3646.1994.00999.x

Schultz, 1971, Salinity-related polymorphism in the brackish-water diatom Cyclotella cryptica, Can J Bot, 49, 1285, 10.1139/b71-182

Schultz, 1968, Production of male gametes and auxospores in the centric diatoms Cyclotella meneghiniana and C. cryptica, J Phycol, 4, 85, 10.1111/j.1529-8817.1968.tb04681.x

Simon, 1997, The identification of Chrysochromulina and Prymnesium species (Haptophyta, Prymnesiophyceae) using fluorescent or chemiluminescent oligonucleotide probes: a means for improving studies on toxic algae, Eur J Phycol, 32, 393, 10.1080/09670269710001737339

Simon, 2000, Oligonucleotide probes for the identification of three algal groups by dot blot and fluorescent whole-cell hybridization, J Eukaryot Microbiol, 47, 76, 10.1111/j.1550-7408.2000.tb00014.x

Swofford DL (1998) PAUP*. Phylogenetic Analysis Using Parsimony (* and other methods). Version 4.0b10. Sinauer Associates, Sunderland, Massachusetts

Tedrow, 2002, The effects of biogenically active compounds on Cyclotella meneghiniana (Bacillariophyta), J Phycol, 38,S1, 34, 10.1046/j.1529-8817.38.s1.99.x

Thompson, 1997, The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucleic Acids Res, 25, 4876, 10.1093/nar/25.24.4876

Tibayrenc, 1991, Towards a population genetics of microorganisms: the clonal theory of parasitic protozoa, Parasitol Today, 7, 228, 10.1016/0169-4758(91)90234-F

Tibayrenc, 2002, The clonal theory of parasitic protozoa: 12 years on, Trends Parasitol, 18, 405, 10.1016/S1471-4922(02)02357-7

Tibayrenc, 1991, Are eukaryotic microorganisms clonal or sexual? A population genetics vantage, Proc Natl Acad Sci USA, 88, 5129, 10.1073/pnas.88.12.5129

Tuchman, 1984, Effects of low level salinity concentrations on the growth of Cyclotella meneghiniana Kütz. (Bacillariophyta), Arch Protistenkd, 128, 319, 10.1016/S0003-9365(84)80003-2

Weiller, 1998, Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences, Mol Biol Evol, 15, 326, 10.1093/oxfordjournals.molbev.a025929

White, 1990, Amplification and Direct Sequencing of Fungal Ribosomal RNA Genes for Phylogenetics, 315

Zechman, 1994, Use of ribosomal DNA internal transcribed spacers for phylogenetic studies in diatoms, J Phycol, 30, 507, 10.1111/j.0022-3646.1994.00507.x

Zuker, 2003, Mfold web server for nucleic acid folding and hybridization prediction, Nucleic Acids Res, 31, 3406, 10.1093/nar/gkg595