Nationwide Surveillance of Clinical Carbapenem-resistant Enterobacteriaceae (CRE) Strains in China

Alikhan, 2011, BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons, BMC Genomics, 12, 1, 10.1186/1471-2164-12-402

Berrazeg, 2014, New Delhi Metallo-beta-lactamase around the world: an eReview using Google Maps, Euro Surveill., 19, 10.2807/1560-7917.ES2014.19.20.20809

Borgia, 2012, Outbreak of carbapenem-resistant enterobacteriaceae containing blaNDM-1, Ontario, Canada, Clin. Infect. Dis., 55, e109, 10.1093/cid/cis737

Cai, 2014, Emergence of Escherichia coli sequence type 131 isolates producing KPC-2 carbapenemase in China, Antimicrob. Agents Chemother., 58, 1146, 10.1128/AAC.00912-13

CDC

Chen, 2011, Emergence of NDM-1-producing Acinetobacter baumannii in China, J. Antimicrob. Chemother., 66, 1255, 10.1093/jac/dkr082

CLSI, 2016

Dallenne, 2010, Development of a set of multiplex PCR assays for the detection of genes encoding important beta-lactamases in Enterobacteriaceae, J. Antimicrob. Chemother., 65, 490, 10.1093/jac/dkp498

Goel, 2011, Trend analysis of antimicrobial consumption and development of resistance in non-fermenters in a tertiary care hospital in Delhi, India, J. Antimicrob. Chemother., 66, 1625, 10.1093/jac/dkr167

Grundmann, 2016, Occurrence of carbapenemase-producing Klebsiella pneumoniae and Escherichia coli in the European survey of carbapenemase-producing Enterobacteriaceae (EuSCAPE): a prospective, multinational study, Lancet Infect. Dis.

Huang, 2016, Widespread dissemination of Carbapenem-resistant Escherichia coli sequence type 167 strains harboring blaNDM-5 in clinical settings in China, Antimicrob. Agents Chemother., 60, 4364, 10.1128/AAC.00859-16

Karaiskos, 2014, Multidrug-resistant and extensively drug-resistant Gram-negative pathogens: current and emerging therapeutic approaches, Expert. Opin. Pharmacother., 15, 1351, 10.1517/14656566.2014.914172

Kumarasamy, 2010, Emergence of a new antibiotic resistance mechanism in India, Pakistan, and the UK: a molecular, biological, and epidemiological study, Lancet Infect. Dis., 10, 597, 10.1016/S1473-3099(10)70143-2

Li, 2016, Complete genetic analysis of plasmids carrying mcr-1 and other resistance genes in an Escherichia coli isolate of animal origin, J. Antimicrob. Chemother., 10.1093/jac/dkw509

Li, 2017, Genetic characterization of mcr-1-bearing plasmids to depict molecular mechanisms underlying dissemination of the colistin resistance determinant, J. Antimicrob. Chemother., 72, 393, 10.1093/jac/dkw411

Liang Chen, 2014, Epidemic Klebsiella pneumoniae ST258 is a hybrid strain, MBio, 5, e01355-14, 10.1128/mBio.01355-14

Lin, 2015, First detection of conjugative plasmid-borne fosfomycin resistance gene fosA3 in Salmonella isolates of food origin, Antimicrob. Agents Chemother., 59, 1381, 10.1128/AAC.04750-14

Liu, 2014, Clinical and molecular characteristics of emerging hypervirulent Klebsiella pneumoniae bloodstream infections in mainland China, Antimicrob. Agents Chemother., 58, 5379, 10.1128/AAC.02523-14

Liu, 2016, Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study, Lancet Infect. Dis., 16, 161, 10.1016/S1473-3099(15)00424-7

Liu, 2017, Molecular characterization of Escherichia coli isolates carrying mcr-1, fosA3 and ESBL genes from food samples in China, Antimicrob. Agents Chemother., 10.1128/AAC.00064-17

Livermore, 2004, The need for new antibiotics, Clin. Microbiol. Infect., 10, 1, 10.1111/j.1465-0691.2004.1004.x

Livermore, 2009, Has the era of untreatable infections arrived?, J. Antimicrob. Chemother., 64, i29, 10.1093/jac/dkp255

Naas, 2011, When carbapenem-hydrolyzing beta-lactamase Kpc meets Escherichia coli ST131 in France, Antimicrob. Agents Chemother., 55, 4933, 10.1128/AAC.00719-11

Nordmann, 2012, Carbapenem resistance in Enterobacteriaceae: here is the storm!, Trends Mol. Med., 18, 263, 10.1016/j.molmed.2012.03.003

Ortega, 2016, Carbapenemase-producing Escherichia coli is becoming more prevalent in Spain mainly because of the polyclonal dissemination of OXA-48, J. Antimicrob. Chemother., 71, 2131, 10.1093/jac/dkw148

Overbeek, 2014, The SEED and the rapid annotation of microbial genomes using subsystems technology (RAST), Nucleic Acids Res., 42, D206, 10.1093/nar/gkt1226

Pfeifer, 2011, Molecular characterization of blaNDM-1 in an Acinetobacter baumannii strain isolated in Germany in 2007, J. Antimicrob. Chemother., 66, 1998, 10.1093/jac/dkr256

Qin, 2014, High incidence and endemic spread of NDM-1-positive Enterobacteriaceae in Henan Province, China, Antimicrob. Agents Chemother., 58, 4275, 10.1128/AAC.02813-13

Wang, 2015, Increased prevalence of carbapenem resistant Enterobacteriaceae in hospital setting due to cross-species transmission of the bla NDM-1 element and clonal spread of progenitor resistant strains, Front. Microbiol., 6, 595

Yang, 2014, blaNDM-5 carried by an IncX3 plasmid in Escherichia coli sequence type 167, Antimicrob. Agents Chemother., 58, 7548, 10.1128/AAC.03911-14

Yang, 2015, Dissemination of NDM-1-producing Enterobacteriaceae mediated by the IncX3-type plasmid, PLoS One, 10, e0129454, 10.1371/journal.pone.0129454

Yong, 2009, Characterization of a new metallo-beta-lactamase gene, bla (NDM-1), and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India, Antimicrob. Agents Chemother., 53, 5046, 10.1128/AAC.00774-09

Zhang, 2016, Further spread of bla NDM-5 in Enterobacteriaceae via IncX3 plasmids in Shanghai, China, Front. Microbiol., 7, 424

Zilberberg, 2013, Secular trends in gram-negative resistance among urinary tract infection hospitalizations in the United States, 2000–2009, Infect. Control Hosp. Epidemiol., 34, 940, 10.1086/671740