MrBayes 3: Bayesian phylogenetic inference under mixed models

Bioinformatics - Tập 19 Số 12 - Trang 1572-1574 - 2003
Fredrik Ronquist1, John P. Huelsenbeck2
1Department of Systematic Zoology, Evolutionary Biology Centre, Uppsala University, Norbyv. 18D, SE-752 36 Uppsala, Sweden.
2Section of Ecology, Behavior, and Evolution, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093-0116 USA

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Abstract Summary: MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models. This allows the user to analyze heterogeneous data sets consisting of different data types—e.g. morphological, nucleotide, and protein—and to explore a wide variety of structured models mixing partition-unique and shared parameters. The program employs MPI to parallelize Metropolis coupling on Macintosh or UNIX clusters. Availability: http://morphbank.ebc.uu.se/mrbayes Contact: [email protected] * To whom correspondence should be addressed.

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Bioinformatics

Tập 19 Số 12

1572-1574

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