Molecular Characterization of an Oomycete-Responsive PR-5 Protein Gene from Zingiber zerumbet
Tóm tắt
Từ khóa
Tài liệu tham khảo
Adhikari TB, Balaji B, Breeden J, Goodwin SB (2007) Resistance of wheat to Mycosphaerella graminicola involves early and late peaks of gene expression. Physiol Mol Plant Pathol 71:55–68
Alignan M, Hewezi T, Petitprez M, Dechamp-Guillaume G, Gentzbittel L (2006) A cDNA microarray approach to decipher sunflower (Helianthus annus) responses to the necrotrophic fungus Phoma macdonaldi. New Phytol 170:523–536
Asselbergh B, Curvers K, Franca SC, Audenaert K, Vuylsteke M, Breusegem FV, Hofte M (2007) Resistance to Botrytis cinerea in sitiens, an abscisic acid-deficient tomato mutant, involves timely production of hydrogen peroxide and cell wall modifications in the epidermis. Plant Physiol 144:1863–1877
Breiteneder H (2004) Thaumatin-like proteins-a new family of pollen and fruit allergens. Allergy 59:479-481
Campos MA, Ribeiro SG, Rigden DJ, Monte DC, Grossi de Sa MF (2002) Putative pathogenesis-related genes within Solanum nigrum L. var. americanum genome: isolation of two genes coding for PR5-like proteins, phylogenetic and sequence analysis. Physiol Mol Plant Pathol 61:205–216
Chen LR, Chen YJ, Lee CY, Lin TY (2007) MeJA-induced transcriptional changes in adventitious roots of Bupleurum kaoi. Plant Sci 173:12–24
Ellis J, Catanzariti AM, Dodds P (2006) The problem of how fungal and oomycetes avirulence proteins enter plant cells. Trends Plant Sci 11:61–63
Fung RWM, Gonzalo M, Fekete C, Kovacs LG, He Y, Marsh E, McIntyre LM, Schachtman DP, Qiu W (2008) Powdery mildew induces defense-oriented reprogramming of the transcriptome in a susceptible but not in a resistant grapevine. Plant Physiol 146:236–249
Ge X, Li GJ, Wang SB, Zhu H, Zhu T, Wang X, Xia Y (2007) AtNUDT7, a negative regulator of basal immunity in Arabidopsis, modulates two distinct defense response pathways and is involved in maintaining redox homeostasis. Plant Physiol 145:204–215
Ghosh R, Chakrabarti C (2008) Crystal structure analysis of NP24-I: a thaumatin-like protein. Planta 228:883–890
Glazebrook J (2005) Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens. Annu Rev Phytopathol 43:205–227
Gomez-Gomez L (2004) Plant perception systems for pathogen recognition and defence. Mol Immunol 41:1055–1062
Grenier J, Potvin C, Trudel J, Asselin A (1999) Some thaumatin-like proteins hydrolyse polymeric β-1,3-glucans. Plant J 19:473–480
Hardham AR, Takemoto D, White RG (2008) Rapid and dynamic subcellular reorganization following mechanical stimulation of Arabidopsis epidermal cells mimics responses to fungal and oomycete attack. BMC Plant Biol 8:63
Kavitha PG, Thomas G (2008a) Population genetic structure of the clonal plant Zingiber zerumbet (L.) Smith (Zingiberaceae), a wild relative of cultivated ginger, and its response to Pythium aphanidermatum. Euphytica 160:89–100
Kavitha PG, Thomas G (2008b) Defence transcriptome profiling of Zingiber zerumbet (L.) Smith by mRNA differential display. J Biosci 33:81–90
Kavitha PG, Thomas G (2008c) Expression analysis of defense-related genes in Zingiber (Zingiberaceae) species with different levels of compatibility to the soft rot pathogen Pythium aphanidermatum. Plant Cell Rep 27:1767–1776
Kliebenstein DJ, Rowe HC (2008) Ecological costs of biotrophic versus necrotrophic pathogen resistance, the hypersensitive response and signal transduction. Plant Sci 174:551–556
Koiwa H, Kato H, Nakatsu T, Oda J, Yamada Y, Sato F (1999) Crystal structure of tobacco PR-5d protein at 1.8 Å resolution reveals a conserved acidic cleft structure in antifungal thaumatin-like proteins. J Mol Biol 286:1137–1145
Kouwizjer MLCE, Grootenhuis PDJ (1995) Parametrization and application of CHEAT95, an extended atom force field for hydrated oligosaccharides. J Phys Chem 99:13426–13436
Laskowski RA, MacArthur MW, Moss DS, Thornton JM (1993) PROCHECK: a program to check the stereochemistry of protein structures. J Appl Crystallgr 26:283–291
Latijnhouwers M, de Wit PJGM, Govers F (2003) Oomycetes and fungi: similar weaponry to attack plants. Trends Microbiol 11:462–469
Lawrence BM (1984) Major tropical spices—ginger (Zingiber officinale Rosc.). Perfum Flavor 9:1–40
Leone P, Menu-Bouaouiche L, Peumans WJ, Payan F, Barre A, Roussel A, Van Damme EJ, Rougé P (2006) Resolution of the structure of the allergenic and antifungal banana fruit thaumatin-like protein at 1.7 Å. Biochimie 88:45–52
Morris GM, Goodsell DS, Halliday RS, Huey R, Hart WE, Belew RK, Olson AJ (1998) Automated docking using a Lamarckian genetic algorithm and empirical binding free energy function. J Comput Chem 19:1639–1662
Okubara PA, Paulitz TC (2005) Root defense responses to fungal pathogens: a molecular perspective. Plant Soil 274:215–226
Osmond RI, Hrmova M, Fontaine F, Imberty A, Fincher GB (2001) Binding interactions between barley thaumatin-like proteins and (1,3)-β-D-glucans. Kinetics, specificity, structural analysis and biological implications. Eur J Biochem 268:4190–4199
Pritsch C, Muehlbauer GJ, Bushnell WR, Somers DA, Vance CP (2000) Fungal development and induction of defense response genes during early infection of wheat spikes by Fusarium graminearum. Mol Plant Microbe Interact 13:159–169
Salzman RA, Fujita T, Zhu-Salzman K, Hasegawa PM, Bressan RA (1999) An improved RNA isolation method for plant tissues containing high levels of phenolic compounds or carbohydrates. Plant Mol Biol Rep 17:11–17
Sippl MJ (1993) Recognition of errors in three-dimensional structures of proteins. Proteins 17:355–362
Song J, Win J, Tian M, Schornack S, Kaschani F, Ilyas M, van der Hoorn R, Kamoun S (2009) Apoplastic effectors secreted by two unrelated eukaryotic plant pathogens target the tomato defense protease Rcr3. Proc Natl Acad Sci U S A 106:1654–1659
Tamura K, Dudley J, Nei M, Kumar S (2007) Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599
Thompson CE, Fernandes CL, de Souza ON, Salzano FM, Bonatto SL, Freitas LB (2006) Molecular modeling of pathogenesis-related proteins family 5. Cell Biochem Biophys 44:385–394
Trudel J, Grenier J, Potvin C, Asselin A (1998) Several thaumatin-like proteins bind to β-1,3-glucans. Plant Physiol 118:1431–1438
van Kan JAL (2006) Licensed to kill: the lifestyle of a necrotrophic plant pathogen. Trends Plant Sci 11:247–253
van Loon LC, Rep M, Pieterse CMJ (2006) Significance of inducible defense-related proteins in infected plants. Annu Rev Phytopathol 44:135–162
Vleeshouwers VGAA, Dooijeweert WV, Govers F, Kamoun S, Colon LT (2000) Does basal PR gene expression in Solanum species contribute to non-specific resistance to Phytophthora infestans? Physiol Mol Plant Pathol 57:35–42
Zechel DL, Withers SG (2001) Dissection of nucleophilic and acid-base catalysis in glycosidases. Curr Opin Chem Biol 5:643–649