Highly Differentiated Populations of the Freshwater Diatom Sellaphora capitata Suggest Limited Dispersal and Opportunities for Allopatric Speciation

Amato, 2007, Reproductive isolation among sympatric cryptic species in marine diatoms, Protist, 158, 193, 10.1016/j.protis.2006.10.001

Atkinson, 1971, Further experiments in dispersal of phytoplankton by birds, Wildfowl, 22, 98

Beck, 1998, Selectivity of photobiont choice in a defined lichen community: inferences from cultural and molecular studies, New Phytol, 139, 709, 10.1046/j.1469-8137.1998.00231.x

Behnke, 2004, Reproductive compatibility and rDNA sequence analyses in the Sellaphora pupula species complex (Bacillariophyta), J Phycol, 40, 193, 10.1046/j.1529-8817.2004.03037.x

Carlson, 1976, A trophic state index for lakes, Limnol Oceanogr, 22, 361, 10.4319/lo.1977.22.2.0361

Casteleyn, 2008, Pseudo-nitzschia pungens (Bacillariophyceae): a cosmopolitan species?, Harmful Algae, 7, 241, 10.1016/j.hal.2007.08.004

Casteleyn G, Evans KM, Backeljau T, D’hondt S, Chepurnov VA, Sabbe K, Vyverman W (2009) Lack of population genetic structuring in the marine planktonic diatom Pseudo-nitzschia pungens (Bacillariophyceae) in a heterogeneous area in the Southern Bight of the North Sea. Mar Biol, doi:10.1007/s00227-009-1157-6.

Coyne, 2004

Crowl, 1992, The impact of introduced brown and rainbow trout on native fish: the case of Australasia, Rev Fish Biol Fish, 2, 217, 10.1007/BF00045038

Darling, 2007, Global molecular phylogeography reveals persistent Arctic circumpolar isolation in a marine planktonic protist, Proc Natl Acad Sci USA, 104, 5002, 10.1073/pnas.0700520104

De Meester, 2002, The Monopolization Hypothesis and the dispersal-gene flow paradox in aquatic organisms, Acta Oecol, 23, 121, 10.1016/S1146-609X(02)01145-1

Evans, 2009, A proposed protocol for nomenclaturally effective DNA barcoding of microalgae, Phycologia, 48, 70, 10.2216/08-70.1

Evans, 2009, Ten microsatellite markers for the freshwater diatom Sellaphora capitata, Mol Ecol Resour, 9, 216, 10.1111/j.1755-0998.2008.02383.x

Evans, 2005, High levels of genetic diversity and low levels of genetic differentiation in North Sea Pseudo-nitzschia pungens (Bacillariophyceae) populations, J Phycol, 41, 506, 10.1111/j.1529-8817.2005.00084.x

Evans, 2007, An assessment of potential diatom “barcode” genes (cox1, rbcL, 18S and ITS rDNA) and their effectiveness in determining relationships in Sellaphora (Bacillariophyta), Protist, 158, 349, 10.1016/j.protis.2007.04.001

Evans, 2008, A molecular systematic approach to explore diversity within the Sellaphora pupula species complex (Bacillariophyta), J Phycol, 44, 215, 10.1111/j.1529-8817.2007.00454.x

Finlay, 2004, Protist diversity is different?, Protist, 155, 15, 10.1078/1434461000160

Friedl, 1996, Evolution of the polyphyletic genus Pleurastrum (Chlorophyta): inferences from nuclear-encoded ribosomal DNA sequences and motile cell ultrastructures, Phycologia, 35, 456, 10.2216/i0031-8884-35-5-456.1

Friedl, 1997, Species relationships in the lichen alga Trebouxia (Chlorophyta, Trebouxiophyceae): molecular phylogenetic analyses of nuclear-encoded large subunit rRNA gene sequences, Symbiosis, 23, 125

Glaubitz, 2004, convert: a user-friendly program to reformat diploid genotypic data for commonly used population genetic software packages, Mol Ecol Notes, 4, 309, 10.1111/j.1471-8286.2004.00597.x

Goodman, 1997, rst calc: a collection of computer programs for calculating unbiased estimates of genetic differentiation and determining their significance for microsatellite data, Mol Ecol, 6, 881, 10.1046/j.1365-294X.1997.00260.x

Goudet J (2001) fstat, a program to estimate and test gene diversities and fixation indicies (version 2.9.3) 〈http://www.unil.ch/izea/softwares/fstat.html〉

Green, 2008, The potential role of waterbirds in dispersing invertebrates and plants in arid Australia, Freshwater Biol, 53, 380, 10.1111/j.1365-2427.2007.01901.x

Harper MA (1994) Did Europeans Introduce Asterionella formosa Hassall to New Zealand? In: Kociolek JP (ed.) Proceedings of the 11th International Diatom Symposium, California Academy of Sciences, San Francisco, pp 479–484

Hoffman, 2005, Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion, Mol Ecol, 14, 599, 10.1111/j.1365-294X.2004.02419.x

Holm, 1979, A simple sequentially rejective multiple test procedure, Scand J Stat, 6, 65

Jakobsson, 2007, clumpp: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure, Bioinformatics, 23, 1801, 10.1093/bioinformatics/btm233

Jobb, 2004, treefinder: a powerful graphical analysis environment for molecular phylogenetics, BMC Evol Biol, 4, 18, 10.1186/1471-2148-4-18

Kellogg, 2006, Aerobiology and the global transport of desert dust, Trends Ecol Evol, 21, 638, 10.1016/j.tree.2006.07.004

Kilroy, 2008, A rapid technique for assessing the suitability of areas for invasive species applied to New Zealand's rivers, Divers Distrib, 14, 262, 10.1111/j.1472-4642.2007.00406.x

Kohn, 2005, Mechanisms of fungal speciation, Annu Rev Phytopathol, 43, 279, 10.1146/annurev.phyto.43.040204.135958

Kooistra, 2008, Global diversity and biogeography of Skeletonema species (Bacillariophyta), Protist, 159, 177, 10.1016/j.protis.2007.09.004

Lewis, 1997, Genetic variation in the diatom Fragilaria capucina (Fragilariaceae) along a latitudinal gradient across North America, Plant Syst Evol, 204, 99, 10.1007/BF00982534

Mann, 2005, Auxosporulation, mating system, and reproductive isolation in Neidium (Bacillariophyta), Phycologia, 44, 335, 10.2216/0031-8884(2005)44[335:AMSARI]2.0.CO;2

Mann, 1996, Biodiversity, biogeography and conservation of diatoms, Hydrobiologia, 336, 19, 10.1007/BF00010816

Mann, 2007, Molecular Genetics and the Neglected Art of Diatomics, 231

Mann, 1999, Sexuality, incompatibility, size variation, and preferential polyandry in natural populations and clones of Sellaphora pupula (Bacillariophyceae), J Phycol, 35, 152, 10.1046/j.1529-8817.1999.3510152.x

Mann, 2008, Revision of the diatom genus Sellaphora: a first account of the larger species in the British Isles, Fottea, 8, 15, 10.5507/fot.2008.002

Mann, 2004, The Sellaphora pupula species complex (Bacillariophyceae): morphometric analysis, ultrastructure and mating data provide evidence for five new species, Phycologia, 43, 459, 10.2216/i0031-8884-43-4-459.1

Meirmans, 2006, Using the AMOVA framework to estimate a standardized genetic differentiation measure, Evolution, 60, 2399, 10.1111/j.0014-3820.2006.tb01874.x

Miller MP (1997) Tools for Population Genetic Analyses (tfpga) 〈http://www.marksgeneticsoftware.net/〉

Nagai, 2007, Microsatellite markers reveal population genetic structure of the toxic dinoflagellate Alexandrium tamarense (Dinophyceae) in Japanese coastal waters, J Phycol, 43, 43, 10.1111/j.1529-8817.2006.00304.x

Nei, 1972, Genetic distance between populations, Am Nat, 106, 283, 10.1086/282771

Papke, 2004, The importance of physical isolation to microbial diversification, FEMS Microbiol Ecol, 48, 293, 10.1016/j.femsec.2004.03.013

Park SDE (2001) Trypanotolerance in West African cattle and the Population Genetic Effects of Selection. Ph.D. Thesis, University of Dublin

Pompanon, 2005, Genotyping errors: causes, consequences and solutions, Nat Rev Genet, 6, 847, 10.1038/nrg1707

Posada, 1998, modeltest: testing the model of DNA substitution, Bioinformatics, 14, 817, 10.1093/bioinformatics/14.9.817

Pritchard, 2000, Inference of population structure using multilocus genotype data, Genetics, 155, 945, 10.1093/genetics/155.2.945

Rosenberg, 2004, distruct: a program for the graphical display of population structure, Mol Ecol Notes, 4, 137, 10.1046/j.1471-8286.2003.00566.x

Round, 1953, An investigation of two benthic algal communities in Malham Tarn, Yorkshire, J Ecol, 41, 174, 10.2307/2257108

Rynearson, 2005, Maintenance of clonal diversity during a spring bloom of the centric diatom Ditylum brightwellii, Mol Ecol, 14, 1631, 10.1111/j.1365-294X.2005.02526.x

Rynearson, 2009, Metapopulation structure in the planktonic diatom Ditylum brightwellii (Bacillariophyceae), Protist, 160, 111, 10.1016/j.protis.2008.10.003

Sarno, 2005, Diversity in the genus Skeletonema (Bacillariophyceae). II. An assessment of the taxonomy of S. costatum-like species with the description of four new species, J Phycol, 41, 151, 10.1111/j.1529-8817.2005.04067.x

Sharma, 2007, Airborne algae: their present status and relevance, J Phycol, 43, 615, 10.1111/j.1529-8817.2007.00373.x

Slatkin, 1995, A measure of population subdivision based on microsatellite allele frequencies, Genetics, 139, 457, 10.1093/genetics/139.1.457

Sluiman, 2008, Assessing phylogenetic affinities and species delimitations in Klebsormidiales (Streptophyta): nuclear-encoded rDNA phylogenies and ITS secondary structure models in Klebsormidium, Hormidiella, and Entransia, J Phycol, 44, 183, 10.1111/j.1529-8817.2007.00442.x

Soudek, 1983, Electrophoretic analysis of the species and population structure of the diatom Asterionella formosa, Can J Bot, 61, 418, 10.1139/b83-049

Telford, 2006, Dispersal limitations matter for microbial morphospecies, Science, 312, 1015, 10.1126/science.1125669

Valière, 2002, gimlet: a computer program for analysing genetic individual identification data, Mol Ecol Notes, 2, 377, 10.1046/j.1471-8286.2002.00228.x-i2

Van de Bund W, Cardoso AC, Heiskanen A-S, Nõges P (2004) Overview of common intercalibration types 〈http://www.ikzm-d.de/addons/pdfs/15_ICTypeManual_v4_0.pdf〉

Vanormelingen, 2008, The diversity and distribution of diatoms: from cosmopolitanism to narrow endemism, Biodivers Conserv, 17, 393, 10.1007/s10531-007-9257-4

Vanormelingen, 2007, Congruence of morphological, reproductive and ITS rDNA sequence data in some Australasian Eunotia bilunaris (Bacillariophyta), Eur J Phycol, 42, 61, 10.1080/09670260600942635

Vanormelingen, 2008, Genetic divergence and reproductive barriers among morphologically heterogeneous sympatric clones of Eunotia bilunaris sensu lato (Bacillariophyta), Protist, 159, 73, 10.1016/j.protis.2007.08.004

Vyverman, 1998, Eunophora gen. nov. (Bacillariophyta) from Tasmania and New Zealand: description and comparison with Eunotia and amphoroid diatoms, Eur J Phycol, 33, 95, 10.1080/09670269810001736593

Vyverman, 2007, Historical processes constrain patterns in global diatom diversity, Ecology, 88, 1924, 10.1890/06-1564.1

Weir, 1984, Estimating F-statistics for the analysis of population structure, Evolution, 38, 1358

Whitaker, 2006, Allopatric origins of microbial species, Philos Trans R Soc Lond Ser B Biol Sci, 361, 1975, 10.1098/rstb.2006.1927