HMG proteins: dynamic players in gene regulation and differentiation
Tóm tắt
Từ khóa
Tài liệu tham khảo
Bustin, 2005, The dynamics of histone H1 function in chromatin, Mol Cell, 17, 617, 10.1016/j.molcel.2005.02.019
Goodwin, 1973, A new group of chromatin-associated proteins with a high content of acidic and basic amino acids, Eur J Biochem, 38, 14, 10.1111/j.1432-1033.1973.tb03026.x
Sgarra, 2004, Nuclear phosphoproteins HMGA and their relationship with chromatin structure and cancer, FEBS Lett, 574, 1, 10.1016/j.febslet.2004.08.013
Agresti, 2003, HMGB proteins and gene expression, Curr Opin Genet Dev, 13, 170, 10.1016/S0959-437X(03)00023-6
Martinez Hoyos, 2004, Identification of the genes up- and down-regulated by the high mobility group A1 (HMGA1) proteins: tissue specificity of the HMGA1-dependent gene regulation, Cancer Res, 64, 5728, 10.1158/0008-5472.CAN-04-1410
Chau, 2005, IFN-γ gene expression is controlled by the architectural transcription factor HMGA1, Int Immunol, 17, 297, 10.1093/intimm/dxh209
Whitley, 1994, A striking similarity in the organization of the E-selectin and beta interferon gene promoters, Mol Cell Biol, 14, 6464, 10.1128/MCB.14.10.6464
Lewis, 1994, Cooperativity between two NF-κB complexes, mediated by high-mobility group protein I(Y), is essential for cytokine-induced expression of the E-selectin promoter, Mol Cell Biol, 14, 5701, 10.1128/MCB.14.9.5701
Treff, 2004, Human KIT ligand promoter is positively regulated by HMGA1 in breast and ovarian cancer cells, Oncogene, 23, 8557, 10.1038/sj.onc.1207926
Attema, 2002, The human IL-2 gene promoter can assemble a positioned nucleosome that becomes remodeled upon T cell activation, J Immunol, 169, 2466, 10.4049/jimmunol.169.5.2466
Darville, 2004, An octamer motif is required for activation of the inducible nitric oxide synthase promoter in pancreatic β-cells, Endocrinology, 145, 1130, 10.1210/en.2003-1200
Foti, 2005, Lack of the architectural factor HMGA1 causes insulin resistance and diabetes in humans and mice, Nat Med, 11, 765, 10.1038/nm1254
Baldassarre, 2003, Negative regulation of BRCA1 gene expression by HMGA1 proteins accounts for the reduced BRCA1 protein levels in sporadic breast carcinoma, Mol Cell Biol, 23, 2225, 10.1128/MCB.23.7.2225-2238.2003
Battista, 2005, High mobility group A1 proteins downregulate RAG2 gene expression, Biochem J, 389, 91, 10.1042/BJ20041607
Rothermund, 2005, c-Myc-independent restoration of multiple phenotypes by two c-Myc target genes with overlapping functions, Cancer Res, 65, 2097, 10.1158/0008-5472.CAN-04-2928
Reeves, 2001, Architectural transcription factor HMGI(Y) promotes tumor progression and mesenchymal transition of human epithelial cells, Mol Cell Biol, 21, 575, 10.1128/MCB.21.2.575-594.2001
Edberg, 2005, Dynamic and differential in vivo modifications of the isoform HMGA1a and HMGA1b chromatin proteins, J Biol Chem, 280, 8961, 10.1074/jbc.M407348200
Sgarra, 2003, Increase of HMGA1a protein methylation is a distinctive characteristic of leukaemic cells induced to undergo apoptosis, Cell Death Differ, 10, 386, 10.1038/sj.cdd.4401184
Harrer, 2004, Dynamic interaction of HMGA1a proteins with chromatin, J Cell Sci, 117, 3459, 10.1242/jcs.01160
Sgarra, 2005, Discovering high mobility group A molecular partners in tumour cells, Proteomics, 5, 1494, 10.1002/pmic.200401028
Liu, 2003, Hmga1 is required for normal sperm development, Mol Reprod Dev, 66, 81, 10.1002/mrd.10323
Tessari, 2003, Transcriptional activation of the cyclin A gene by the architectural transcription factor HMGA2, Mol Cell Biol, 23, 9104, 10.1128/MCB.23.24.9104-9116.2003
Knapp, 2004, The long acidic tail of high mobility group box 1 (HMGB1) protein forms an extended and flexible structure that interacts with specific residues within and between the HMG boxes, Biochemistry, 43, 11992, 10.1021/bi049364k
Thomas, 2001, HMG1 and 2, and related ‘architectural’ DNA-binding proteins, Trends Biochem Sci, 26, 167, 10.1016/S0968-0004(01)01801-1
Bonaldi, 2002, The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding, EMBO J, 21, 6865, 10.1093/emboj/cdf692
Travers, 2003, Priming the nucleosome: a role for HMGB proteins?, EMBO Rep, 4, 131, 10.1038/sj.embor.embor741
Wu, 2004, A ‘one-pot’ assay for the accessibility of DNA in a nucleosome core particle, Nucleic Acids Res, 32, e122, 10.1093/nar/gnh121
Das, 2001, The binding interaction of HMG-1 with the TATA-binding protein/TATA complex, J Biol Chem, 276, 32597, 10.1074/jbc.M011792200
Dasgupta, 2003, TFIIA abrogates the effects of inhibition by HMGB1 but not E1A during the early stages of assembly of the transcriptional preinitiation complex, Biochim Biophys Acta, 1627, 101, 10.1016/S0167-4781(03)00080-0
Najima, 2005, High mobility group protein-B1 (HMGB1) interacts with sterol regulatory element-binding proteins (SREBPs) to enhance their DNA binding, J Biol Chem, 280, 27523, 10.1074/jbc.M414549200\|[sect ]\|
Melvin, 2004, The role of the C-terminal extension (CTE) of the estrogen receptor α and β DNA binding domain in DNA binding and interaction with HMGB, J Biol Chem, 279, 14763, 10.1074/jbc.M313335200
Das, 2004, High mobility group B proteins facilitate strong estrogen receptor binding to classical and half-site estrogen response elements and relax binding selectivity, Mol Endocrinol, 18, 2616, 10.1210/me.2004-0125
Phair, 2004, Global nature of dynamic protein–chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins, Mol Cell Biol, 24, 6393, 10.1128/MCB.24.14.6393-6402.2004
Sapojnikova, 2005, Biochemical observation of the rapid mobility of nuclear HMGB1, Biochim Biophys Acta, 1729, 57, 10.1016/j.bbaexp.2005.03.002
Agresti, 2005, GR and HMGB1 interact only within chromatin and influence each other's residence time, Mol Cell, 18, 109, 10.1016/j.molcel.2005.03.005
Song, 2004, The DNA architectural protein HMGB1 facilitates RTA-mediated viral gene expression in gamma-2 herpesviruses, J Virol, 78, 12940, 10.1128/JVI.78.23.12940-12950.2004
Zhang, 2003, Borna disease virus phosphoprotein represses p53-mediated transcriptional activity by interference with HMGB1, J Virol, 77, 12243, 10.1128/JVI.77.22.12243-12251.2003
Banerjee, 2003, The acidic C-terminal domain and A-box of HMGB-1 regulates p53-mediated transcription, Nucleic Acids Res, 31, 3236, 10.1093/nar/gkg412
Naghavi, 2003, Intracellular high mobility group B1 protein (HMGB1) represses HIV-1 LTR-directed transcription in a promoter- and cell-specific manner, Virology, 314, 179, 10.1016/S0042-6822(03)00453-7
Müller, 2004, Regulated expression and subcellular localization of HMGB1, a chromatin protein with a cytokine function, J Intern Med, 255, 332, 10.1111/j.1365-2796.2003.01296.x
Nemeth, 2005, Hmgb3 deficiency deregulates proliferation and differentiation of common lymphoid and myeloid progenitors, Blood, 105, 627, 10.1182/blood-2004-07-2551
Bonaldi, 2003, Monocytic cells hyperacetylate chromatin protein HMGB1 to redirect it towards secretion, EMBO J, 22, 5551, 10.1093/emboj/cdg516
Lotze, 2005, High-mobility group box 1 protein (HMGB1): nuclear weapon in the immune arsenal, Nat Rev Immunol, 5, 331, 10.1038/nri1594
Cetkovic, 2003, HMGB2 protein from the marine sponge Suberites domuncula, Food Technol Biotechnol, 41, 361
Kruppa, 2001, Nhp6, an HMG1 protein, functions in SNR6 transcription by RNA polymerase III in S. cerevisiae, Mol Cell, 7, 309, 10.1016/S1097-2765(01)00179-4
Eriksson, 2004, TATA-binding protein mutants that are lethal in the absence of the Nhp6 high-mobility-group protein, Mol Cell Biol, 24, 6419, 10.1128/MCB.24.14.6419-6429.2004
Lopez, 2001, High-mobility-group proteins NHP6A and NHP6B participate in activation of the RNA polymerase III SNR6 gene, Mol Cell Biol, 21, 3096, 10.1128/MCB.21.9.3096-3104.2001
Moreira, 2000, Chromatin-mediated transcriptional regulation by the yeast architectural factors NHP6A and NHP6B, EMBO J, 19, 6804, 10.1093/emboj/19.24.6804
Laser, 2000, A new screen for protein interactions reveals that the Saccharomyces cerevisiae high mobility group proteins Nhp6A/B are involved in the regulation of the GAL1 promoter, Proc Natl Acad Sci USA, 97, 13732, 10.1073/pnas.250400997
Fragiadakis, 2004, Nhp6 facilitates Aft1 binding and Ssn6 recruitment, both essential for FRE2 transcriptional activation, EMBO J, 23, 333, 10.1038/sj.emboj.7600043
Yu, 2003, Regulation of TATA-binding protein binding by the SAGA complex and the Nhp6 high-mobility group protein, Mol Cell Biol, 23, 1910, 10.1128/MCB.23.6.1910-1921.2003
Biswas, 2004, Role for Nhp6, Gcn5, and the Swi/Snf complex in stimulating formation of the TATA-binding protein-TFIIA–DNA complex, Mol Cell Biol, 24, 8312, 10.1128/MCB.24.18.8312-8321.2004
Belotserkovskaya, 2004, Facts about FACT and transcript elongation through chromatin, Curr Opin Genet Dev, 14, 139, 10.1016/j.gde.2004.02.004
Rhoades, 2004, Structural features of nucleosomes reorganized by yeast FACT and its HMG Box component, Nhp6, Mol Cell Biol, 24, 3907, 10.1128/MCB.24.9.3907-3917.2004
Dejardin, 2005, Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1, Nature, 434, 533, 10.1038/nature03386
Gabellini, 2002, Inappropriate gene activation in FSHD. A repressor complex binds a chromosomal repeat deleted in dystrophic muscle, Cell, 110, 339, 10.1016/S0092-8674(02)00826-7
Pallier, 2003, Association of chromatin proteins HMGB1 and HMGB2 with mitotic chromosomes, Mol Biol Cell, 14, 3414, 10.1091/mbc.E02-09-0581
Bustin, 2001, Chromatin unfolding and activation by HMGN* chromosomal proteins, Trends Biochem Sci, 26, 431, 10.1016/S0968-0004(01)01855-2
Prymakowska-Bosak, 2001, Mitotic phosphorylation prevents the binding of HMGN proteins to chromatin, Mol Cell Biol, 21, 5169, 10.1128/MCB.21.15.5169-5178.2001
Prymakowska-Bosak, 2002, Mitotic phosphorylation of chromosomal protein HMGN1 inhibits nuclear import and promotes interaction with 14.3.3 proteins, Mol Cell Biol, 22, 6809, 10.1128/MCB.22.19.6809-6819.2002
Soloaga, 2003, MSK2 and MSK1 mediate the mitogen- and stress-induced phosphorylation of histone H3 and HMG-14, EMBO J, 22, 2788, 10.1093/emboj/cdg273
Lim, 2004, Chromosomal protein HMGN1 modulates histone H3 phosphorylation, Mol Cell, 15, 573, 10.1016/j.molcel.2004.08.006
Catez, 2002, Competition between histone H1 and HMGN proteins for chromatin binding sites, EMBO Rep, 3, 760, 10.1093/embo-reports/kvf156
West, 2004, Chromosomal proteins HMGN3a and HMGN3b regulate the expression of glycine transporter 1, Mol Cell Biol, 24, 3747, 10.1128/MCB.24.9.3747-3756.2004
Vigneault, 2004, Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition, Biol Reprod, 70, 1701, 10.1095/biolreprod.103.022970
Lehtonen, 2001, HMG-17 is an early marker of inductive interactions in the developing mouse kidney, Differentiation, 67, 154, 10.1046/j.1432-0436.2001.670407.x
Birger, 2003, Chromosomal protein HMGN1 enhances the rate of DNA repair in chromatin, EMBO J, 22, 1665, 10.1093/emboj/cdg142
Catez, 2004, A network of dynamic interactions between histone H1 and HMG proteins in chromatin, Mol Cell Biol, 24, 4321, 10.1128/MCB.24.10.4321-4328.2004