Các phân nhóm di truyền trong Trypanosoma cruzi (Đơn Vị Phân Tí Riêng) và tầm quan trọng của chúng đối với dịch tễ học phân tử và tiến hóa thực nghiệm
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#Trypanosoma cruzi #đa dạng di truyền #cấu trúc quần thể #đơn vị phân tí riêng #dịch tễ học phân tử #tiến hóa thực nghiệmTài liệu tham khảo
Miles MA, Toyé PJ, Oswald SC, Godfrey DG: The identification by isoenzyme patterns of two distinct strain-groups of Trypanosoma cruzi, circulating independently in a rural area of Brazil. Trans R Soc Trop Med Hyg. 1977, 71 (3): 217-225.
Miles MA, Souza A, Povoa M, Shaw JJ, Lainson R, Toyé PJ: Isozymic heterogeneity of Trypanosoma cruzi in the first autochtonous patients with Chagas'disease in Amazonian Brazil. Nature. 1978, 272: 819-821.
Barrett TV, Hoff RH, Mott KE, Miles MA, Godfreyy DG, Teixeira R, De Souza JAA, Sherlock IA: Epidemiological aspects of three Trypanosoma cruzi zymodemes in Bahia State, Brazil. Trans R Soc Trop Med Hyg. 1980, 74: 84-90.
Miles MA, Povoa M, Prata A, Cedillos RA, De Souza AA, Macedo V: Do radically dissimilar Trypanosoma cruzi strains (zymodemes) cause Venezuelan and Brazilian forms of Chagas'disease?. Lancet. 1981, 8234: 1336-1340.
Ready PD, Miles MA: Delimitation of Trypanosoma cruzi zymodemes by numerical taxonomy. Trans R Soc Trop Med Hyg. 1980, 74: 238-242.
Tibayrenc M, Ayala FJ: The clonal theory of parasitic protozoa: 12 years on. Trends Parasitol. 2002, 18 (9): 405-410. 10.1016/S1471-4922(02)02357-7.
Tibayrenc M, Cariou ML, Solignac M, Carlier Y: Arguments génétiques contre l'existence d'une sexualité actuelle chez Trypanosoma cruzi ; implications taxinomiques. C R Acad Sci Paris. 1981, 293: 207-209.
Ørskov F, Ørskov I: Summary of a workshop on the clone concept in the epidemiology, taxonomy, and evolution of the Enterobacteriaceae and other Bacteria. J Infect Diseases. 1983, 148: 346-357.
Gaunt MW, Yeo M, Frame IA, tothard JR, Carrasco HJ, Taylor MC, Mena SS, Veazey P, Miles GA, Acosta N, Rojas de Arias A, Miles MA: Mechanism of genetic exchange in American trypanosomes. Nature. 2003, 421: 936-939. 10.1038/nature01438.
Tibayrenc M, Kjellberg F, Ayala FJ: A clonal theory of parasitic protozoa: the population structure of Entamoeba, Giardia, Leishmania, Naegleria, Plasmodium, Trichomonas and Trypanosoma, and its medical and taxonomical consequences. Proc Nat Acad Sci USA. 1990, 87: 2414-2418.
Tibayrenc M, Kjellberg F, Arnaud J, Oury B, Brenière SF, Dardé ML, Ayala FJ: Are eucaryotic microorganisms clonal or sexual? A population genetics vantage. Proc Natl Acad Sci USA. 1991, 88: 5129-5133.
Maynard Smith J, Smith NH, O'Rourke M, Spratt BG: How clonal are bacteria?. Proc Natl Acad Sci USA. 1993, 90: 4384-4388.
Tibayrenc M: Population Genetics of Parasitic Protozoa and other Microorganisms. Advances in Parasitology. Edited by: Baker J, Muller R and Rollinson D. 1995, 36: 47-115.
Tibayrenc M: Genetic epidemiology of parasitic protozoa and other infectious agents: the need for an integrated approach. Int J Parasitol. 1998, 28 (1): 85-104. 10.1016/S0020-7519(97)00180-X.
Tibayrenc M, Ward P, Moya A, Ayala FJ: Natural populations of Trypanosoma cruzi, the agent of Chagas'disease, have a complex multiclonal structure. Proc Nat Acad Sci USA. 1986, 83: 115-119.
Barnabé C, Brisse S, Tibayrenc M: Population structure and genetic typing of Trypanosoma cruzi, the agent of Chagas'disease: a multilocus enzyme electrophoresis approach. Parasitology. 2000, 150: 513-526. 10.1017/S0031182099005661.
Brisse S, Barnabé C, Tibayrenc M: Identification of six Trypanosoma cruzi phylogenetic lineages by random amplified polymorphic DNA and multilocus enzyme electrophoresis. Int J parasitol. 2000, 30: 35-44. 10.1016/S0020-7519(99)00168-X.
Oliveira RP, Broude NE, Macedo AM, Cantor CR, Smith CL, Pena SDJ: Probing the genetic population structure of Trypanosoma cruzi with polymorphic microsatellites. Proc Nat Acad Sci USA. 1998, 95: 3776-3780. 10.1073/pnas.95.7.3776.
Souto RP, Fernandes O, Macedo AM, Campbell DA, Zingales B: DNA markers define two major phylogenetic lineages of Trypanosoma cruzi. Molecular and Biochemical Parasitology. 1996, 83: 141-152. 10.1016/S0166-6851(96)02755-7.
Momen H: Taxonomy of Trypanosoma cruzi : a commentary on characterization and nomenclature. Memorias Instituto Oswaldo Cruz. 1999, 94 (Suppl 1): 181-184.
Brisse S, Verhoef J, Tibayrenc M: Characterisation of large and small subunit rRNA and mini-exon genes further supports the distinction of six Trypanosoma cruzi lineages. Int J Parasitol. 2001, 31: 1218-1226. 10.1016/S0020-7519(01)00238-7.
Brisse S, Dujardin JC, Tibayrenc M: Identification of six Trypanosoma cruzi lineages by sequence-characterised amplified region markers. Mol Biochem Parasitol. 2000, 111: 95-105. 10.1016/S0166-6851(00)00302-9.
Robello C, Gamarro F, Castanys S, Alvarez-Valin F: Evolutionary relationships in Trypanosoma cruzi : molecular phylogenetics supports the existence of a new major lineage of strains. Gene. 2000, 246: 331-338. 10.1016/S0378-1119(00)00074-3.
Kawashita SY, Sanson GF, Fernandes O, Zingales B, Briones MR: Maximum-likelihood divergence date estimates based on rRNA gene sequences suggest two scenarios of Trypanosoma cruzi intraspecific evolution. Mol Biol Evol. 2001, 18: 2250-2259.
Machado CA, Ayala FJ: Nucleotide sequences provide evidence of genetic exchange among distantly related lineages of Trypanosoma cruzi. Proc Nat Acad Sci USA. 2001, 98 (13): 7396-7401. 10.1073/pnas.121187198.
Carrasco HJ, Frame IA, Valente SA, Miles MA: Genetic exchange as a possible source of genomic diversity in sylvatic populations of Trypanosoma cruzi. Am J Trop Med Hyg. 1996, 54: 418-424.
Brisse S, Henriksson J, Barnabé C, Douzery EJP, Berkvens D, Serrano M, De Carvalho MRC, Buck GA, Dujardin JC, Tibayrenc M: Evidence for genetic exchange and hybridization in Trypanosoma cruzi based on nucleotide sequences and molecular karyotype. Infection, Genetics and Evolution. 2003, 2 (3): 173-183. 10.1016/S1567-1348(02)00097-7.
Garzón EA, Barnabé C, Córdova X, Bowen C, Paredes W, Gómez E, Ouaissi A, Tibayrenc M, Guevara AG: Trypanosoma cruzi isoenzyme variability in Ecuador: first observation of zymodeme III genotypes in chronic chagasic patients. Trans R Soc Trop Med Hyg. 2002, 96 (4): 378-382.
Laurent JP, Barnabé C, Quesney V, Noël S, Tibayrenc M: Impact of clonal evolution on the biological diversity of Trypanosoma cruzi. Parasitology. 1997, 114: 213-218. 10.1017/S0031182096008414.
Pinto A, da S, de Lana M, Bastrenta B, Barnabé C, Quesney V, Noël S, Tibayrenc M: Compared vectorial transmissibility of pure and mixed clonal genotypes of Trypanosoma cruzi in Triatoma infestans. Parasitol Res. 1998, 84: 348-353. 10.1007/s004360050409.
Revollo S, Oury B, Laurent JP, Barnabé C, Quesney V, Carrière V, Noël S, Tibayrenc M: Trypanosoma cruzi : impact of clonal evolution of the parasite on its biological and medical properties. Exp Parasitol. 1998, 89: 30-39. 10.1006/expr.1998.4216.
De Lana M, Pinto A, Bastrenta B, Barnabé C, Noël S, Tibayrenc M: Trypanosoma cruzi : Infectivity of clonal genotypes infections in acute and chronic phases in mice. Exp Parasitol. 2000, 96: 61-66. 10.1006/expr.2000.4552.
Pinto AS, de Lana M, Britto C, Bastrenta M, Tibayrenc M: Experimental Trypanosoma cruzi biclonal infection in Triatoma infestans: Detection of distinct clonal genotypes using kinetoplast DNA probes. Int J Parasitol. 2000, 30: 843-848. 10.1016/S0020-7519(00)00058-8.
Toledo MJ, de O, de Lana M, Carneiro CM, Bahia MT, Machado-Coelho GLL, Veloso VM, Barnabé C, Tibayrenc M, Tafuri WL: Impact of Trypanosoma cruzi clonal evolution on its biological properties in mice. Exp Parasitol. 2002, 100: 161-172. 10.1016/S0014-4894(02)00003-6.
Toledo MJ, de O, Bahia MT, Carneiro CM, Martins-Filho OA, Tibayrenc M, Barnabé C, Tafuri WL, de Lana M: Chemotherapy with benznidazole and itraconazole for mice infected with different Trypanosoma cruzi clonal genotypes. Antimicrobial Agents and Chemotherapy. 2003, 47 (1): 223-230. 10.1128/AAC.47.1.223-230.2003.
Tibayrenc M: Towards an integrated genetic epidemiology of parasitic protozoa and other pathogens. Annual Review of Genetics. 1999, 33: 449-477. 10.1146/annurev.genet.33.1.449.
Andrade LO, Machado CR, Chiari E, Pena SD, Macedo AM: Differential tissue distribution of diverse clones of Trypanosoma cruzi in infected mice. Mol Biochem Parasitol. 1999, 100: 163-172. 10.1016/S0166-6851(99)90035-X.
Nei M: Genetic distance between populations. Am Nat. 1972, 106: 283-292. 10.1086/282771.
Jaccard P: Nouvelles recherches sur la distribution florale. Bull Soc vaudoise Sci Nat. 1908, 44: 223-270.
Centers for Disease Control and Prevention: Addressing emerging infectious diseases threat. A prevention strategy for the United States. 1994, 27:
Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV: DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Ac Res. 1990, 18: 6531-6535.
Welsh J, Mcclelland M: Fingerprinting genomes using PCR with arbitrary primers. Nucl Ac Res. 1990, 18: 7213-7218.