Expression and purification of the dihydrolipoamide acetyltransferase and dihydrolipoamide dehydrogenase subunits of the Escherichia coli pyruvate dehydrogenase multienzyme complex: a mass spectrometric assay for reductive acetylation of dihydrolipoamide acetyltransferase

Protein Expression and Purification - Tập 28 - Trang 140-150 - 2003
Wen Wei1, Hong Li2, Natalia Nemeria1, Frank Jordan1
1Departments of Chemistry and the Program in Cellular and Molecular Biodynamics at Rutgers, The State University, Newark, NJ 07102, USA
2Department of Biochemistry and Molecular Biology, University of Medicine and Dentistry of New Jersey, Newark, NJ 07103, USA

Tài liệu tham khảo

Perham, 2000, Swinging arms and swinging domains in multifunctional enzymes: catalytic machines for multistep reactions, Annu. Rev. Biochem., 69, 961, 10.1146/annurev.biochem.69.1.961 De Kok, 1998, The pyruvate dehydrogenase multi-enzyme complex from Gram-negative bacteria, Biochim. Biophys. Acta, 1385, 353, 10.1016/S0167-4838(98)00079-X Stephens, 1983, The pyruvate dehydrogenase complex of Escherichia coli K12. Nucleotide sequence encoding the pyruvate dehydrogenase component, Eur. J. Biochem., 133, 155, 10.1111/j.1432-1033.1983.tb07441.x Arjunan, 2002, Structure of the pyruvate dehydrogenase multienzyme complex E1 component from Escherichia coli at 1.85Å resolution, Biochemistry, 41, 5213, 10.1021/bi0118557 Bleile, 1979, Subunit structure of dihydrolipoyl transacetylase component of pyruvate dehydrogenase complex from Escherichia coli, Proc. Natl. Acad. Sci. USA, 76, 4385, 10.1073/pnas.76.9.4385 Stephens, 1983, The pyruvate dehydrogenase complex of Escherichia coli K12. Nucleotide sequence encoding the dihydrolipoamide acetyltransferase component, Eur. J. Biochem., 133, 481, 10.1111/j.1432-1033.1983.tb07490.x Ali, 1990, Isolation and characterization of lipoylated and unlipoylated domains of the E2p subunit of the pyruvate dehydrogenase complex of Escherichia coli, Biochem. J., 271, 139, 10.1042/bj2710139 Green, 1995, Three-dimensional structure of a lipoyl domain from the dihydrolipoyl acetyltransferase component of the pyruvate dehydrogenase multienzyme complex of Escherichia coli, J. Mol. Biol., 248, 328, 10.1016/S0022-2836(95)80054-9 Jones, 2000, Restricted motion of the lipoyl-lysine swinging arm in the pyruvate dehydrogenase complex of Escherichia coli, Biochemistry, 39, 8448, 10.1021/bi992978i Stephens, 1983, Nucleotide sequence of the lipoamide dehydrogenase gene of Escherichia coli K12, Eur. J. Biochem., 135, 519, 10.1111/j.1432-1033.1983.tb07683.x Patel, 1998, Lipoic acid as an antioxidant. The role of dihydrolipoamide dehydrogenase, 337 Reed, 1958, Studies on the nature and reactions of protein-bound lipoic acid, J. Biol. Chem., 232, 143, 10.1016/S0021-9258(18)70382-7 Attwood, 1986, Carbon-13 and deuterium isotope effects on oxalacetate decarboxylation by pyruvate carboxylase, Biochemistry, 25, 8197, 10.1021/bi00373a012 Russell, 1992, Overproduction of the pyruvate dehydrogenase multienzyme complex of Escherichia coli and site-directed substitutions in the E1p and E2p subunits, Biochem. J., 287, 611, 10.1042/bj2870611 Willms, 1967, α-Keto acid dehydrogenase complexes. Dissociation and reconstitution of the dihydrolipoyl transacetylase of Escherichia coli, J. Biol. Chem., 242, 889, 10.1016/S0021-9258(18)96208-3 Yi, 1996, Effect of substitutions in the thiamin diphosphate-magnesium fold on the activation of the pyruvate dehydrogenase complex from Escherichia coli by cofactors and substrate, J. Biol Chem., 271, 33192, 10.1074/jbc.271.52.33192 Graham, 1989, Kinetics and specificity of reductive acylation of lipoyl domains from 2-oxo acid dehydrogenase multienzyme complexes, Biochemistry, 28, 1574, 10.1021/bi00430a023 Packman, 1984, Domain structure and 1H-n.m.r. spectroscopy of the pyruvate dehydrogenase complex of Bacillus stearothermophilus, Biochem. J., 217, 219, 10.1042/bj2170219 Machado, 1992, Construction and properties of pyruvate dehydrogenase complexes with up to nine lipoyl domains per lipoate acetyltransferase chain, FEMS Microbiol. Lett., 100, 24, 10.1111/j.1574-6968.1992.tb05710.x Quinn, 1997, Lipoylation of acyltransferase components of 2-oxo acid dehydrogenase complexes, 193, 10.1016/S0076-6879(97)79023-2 Wallis, 1994, Structural dependence of post-translational modification and reductive acetylation of the lipoyl domain of the pyruvate dehydrogenase multienzyme complex, J. Mol. Biol., 236, 209, 10.1006/jmbi.1994.1130 Allison, 1988, Overexpression and mutagenesis of the lipoamide dehydrogenase of Escherichia coli, Biochem. J., 256, 741, 10.1042/bj2560741 Westphal, 1988, Lipoamide dehydrogenase from Azotobacter vinelandii. Molecular cloning, organization and sequence analysis of the gene, Eur. J. Biochem., 172, 299, 10.1111/j.1432-1033.1988.tb13887.x Liu, 1999, Site-directed mutagenesis of human dehydrolipoamide dehydrogenase: role of lysine-54 and glutamate-192 in stabilizing the thiolate-FAD intermediate, Prot. Expr. Purif., 16, 27, 10.1006/prep.1999.1047 Lessard, 1998, Expression of genes encoding the E2 and E3 components of the Bacillus stearothermophilus pyruvate dehydrogenase complex and the stoichiometry of subunit interaction in assembly in vitro, Eur. J. Biochem., 258, 491, 10.1046/j.1432-1327.1998.2580491.x Benen, 1989, Molecular cloning and sequence determination of the lpd gene encoding lipoamide dehydrogenase from Pseudomonas fluorescence, J. Gen. Microbiol., 135, 1787