Etiology and characteristics of community-acquired pneumonia in an influenza epidemic period

Chun Lin1, Huanzhu Chen2,3, Ping He2, Yazhen Li2, Changwen Ke2, Xiaoyang Jiao2
1First Affiliated Hospital of Shantou University Medical College, Shantou, 515041, China
2Cell Biology and Genetics Department, Shantou University Medical College, Shantou, 515041, China
3Department of Biochemistry, Medical College of Jiaying University, Meizhou, 514031, China

Tài liệu tham khảo

Spindler, 2012, Swedish guidelines on the management of community-acquired pneumonia in immunocompetent adults—Swedish Society of Infectious Diseases 2012, Scand. J. Infect. Dis., 44, 885, 10.3109/00365548.2012.700120

Gadsby, 2016, Comprehensive molecular testing for respiratory pathogens in community-acquired pneumonia, Clin. Infect. Dis., 62, 817, 10.1093/cid/civ1214

Babady, 2012, Comparison of the Luminex xTAG RVP Fast assay and the Idaho Technology FilmArray RP assay for detection of respiratory viruses in pediatric patients at a cancer hospital, J. Clin. Microbiol., 50, 2282, 10.1128/JCM.06186-11

WHO, 2009

Taubenberger, 2008, The pathology of influenza virus infections, Annu. Rev. Pathol., 3, 499, 10.1146/annurev.pathmechdis.3.121806.154316

Bosch, 2013, Viral and bacterial interactions in the upper respiratory tract, PLoS Pathog., 9, 10.1371/journal.ppat.1003057

Falsey, 2013, Bacterial complications of respiratory tract viral illness: a comprehensive evaluation, J. Infect. Dis., 208, 432, 10.1093/infdis/jit190

McCullers, 2014, The co-pathogenesis of influenza viruses with bacteria in the lung, Nat. Rev. Microbiol., 12, 252, 10.1038/nrmicro3231

Shrestha, 2013, Identifying the interaction between influenza and pneumococcal pneumonia using incidence data, Sci. Transl. Med., 5, 10.1126/scitranslmed.3005982

Wang, 2016, Viral etiology of medically attended influenza-like illnesses in children less than five years old in Suzhou, China, 2011–2014, J. Med. Virol., 88, 1334, 10.1002/jmv.24480

Peng, 2012, The epidemiology and etiology of influenza-like illness in Chinese children from 2008 to 2010, J. Med. Virol., 84, 672, 10.1002/jmv.22247

Yang, 2012, Etiology and clinical characteristics of influenza-like illness (ILI) in outpatients in Beijing, June 2010 to May 2011, PLoS One, 7

Loeffelholz, 2011, Comparison of the FilmArray Respiratory Panel and Prodesse real-time PCR assays for detection of respiratory pathogens, J. Clin. Microbiol., 49, 4083, 10.1128/JCM.05010-11

Byington, 2002, The effect of rapid respiratory viral diagnostic testing on antibiotic use in a children’s hospital, Arch. Pediatr. Adolesc. Med., 156, 1230, 10.1001/archpedi.156.12.1230

File, 2003, Community-acquired pneumonia, Lancet, 362, 1991, 10.1016/S0140-6736(03)15021-0

Mandell, 2007, Infectious Diseases Society of America/American Thoracic Society consensus guidelines on the management of community-acquired pneumonia in adults, Clin. Infect. Dis., 44, S27, 10.1086/511159

Bartlett, 2011, Diagnostic tests for agents of community-acquired pneumonia, Clin. Infect. Dis., 52, S296, 10.1093/cid/cir045

Pirrone, 2016, Microbiome, biofilms, and pneumonia in the ICU, Curr. Opin. Infect. Dis., 29, 160, 10.1097/QCO.0000000000000255

Luchsinger, 2013, Community-acquired pneumonia in Chile: the clinical relevance in the detection of viruses and atypical bacteria, Thorax, 68, 1000, 10.1136/thoraxjnl-2013-203551

Jokinen, 2001, Microbial etiology of community-acquired pneumonia in the adult population of 4 municipalities in eastern Finland, Clin. Infect. Dis., 32, 1141, 10.1086/319746

2001, British thoracic society standards of care C. BTS guidelines for the management of community acquired pneumonia in adults, Thorax, 56, IV1

Rhedin, 2015, Respiratory viruses associated with community-acquired pneumonia in children: matched case-control study, Thorax, 70, 847, 10.1136/thoraxjnl-2015-206933

Bachoumas, 2015, Community-acquired Acinetobacter baumannii pneumonia, Med. Mal. Infect., 45, 337, 10.1016/j.medmal.2015.06.002

Antunes, 2014, Acinetobacter baumannii: evolution of a global pathogen, Pathog. Dis., 71, 292, 10.1111/2049-632X.12125

Teng, 2015, Comparison of pneumonia- and non-pneumonia-related Acinetobacter baumannii bacteremia: impact on empiric therapy and antibiotic resistance, J. Microbiol. Immunol. Infect., 48, 525, 10.1016/j.jmii.2014.06.011

Madhi, 2006, Pneumococcal coinfection with human metapneumovirus, J. Infect. Dis., 193, 1236, 10.1086/503053

2002, British thoracic society standards of care C. British thoracic society guidelines for the management of community acquired pneumonia in childhood, Thorax, 57, i1

Ruuskanen, 2011, Viral pneumonia, Lancet, 377, 1264, 10.1016/S0140-6736(10)61459-6

Mengelle, 2014, The use of a multiplex real-time PCR assay for diagnosing acute respiratory viral infections in children attending an emergency unit, J. Clin. Virol., 61, 411, 10.1016/j.jcv.2014.08.023

Rice, 2012, Critical illness from 2009 pandemic influenza A virus and bacterial coinfection in the United States, Crit. Care Med., 40, 1487, 10.1097/CCM.0b013e3182416f23

Chien, 2010, Predictors and outcomes of respiratory failure among hospitalized pneumonia patients with 2009 H1N1 influenza in Taiwan, J. Infect., 60, 168, 10.1016/j.jinf.2009.12.012

Bagshaw, 2009, Early blood glucose control and mortality in critically ill patients in Australia, Crit. Care Med., 37, 463, 10.1097/CCM.0b013e318194b097

Davenport, 2016, Genomic landscape of the individual host response and outcomes in sepsis: a prospective cohort study, Lancet Respir. Med., 4, 259, 10.1016/S2213-2600(16)00046-1