Efficacy of URP and ISSR markers to determine diversity of indigenous and exotic isolates of Curvularia lunata

Indian Phytopathology - Tập 71 Số 2 - Trang 235-242 - 2018
Pardeep Kumar1, Jameel Akhtar1, A. Kandan2, Baleshwar Singh1, R Kiran1, K. S. S. Nair1, S. C. Dubey1
1Division of Plant Quarantine, ICAR-National Bureau of Plant Genetic Resources, New Delhi, India
2Division of Insect Ecology, ICAR-National Bureau of Agricultural Insect Resources, Bengaluru, India

Tóm tắt

Từ khóa


Tài liệu tham khảo

Aghemiri A, Mehrabi R, Talebi R (2015) Isolation, characterization and genetic diversity analysis of Bipolaris sorokiniana (Sacc.) Shoen., the causal agent of spot blotch of wheat using molecular markers. Crop. Biotechnol 5(11):15–27

Akhtar J, Kandan A, Singh B, Dev U, Chand D, Kumar J, Agarwal PC (2014) A simple modified technique for obtaining pure cultures of seed-borne fungi. Indian J Plant Prot 42:156–159

Akhtar J, Singh B, Kandan A, Kumar P, Dubey SC (2017) Status of Colletotrichum species infecting chilli germplasm processed for pathogen-free conservation in national gene bank, India. Bangladesh J Bot 46(2):631–637

Alam MZ, Hamim I, Ali MA, Ashrafuzzaman M (2014) Effect of seed treatment on seedling health of chili. J Environ Sci Nat Resour 7(1):177–181

Kamaluddeen SS, Simon S, Lal AA (2013) A new blight disease of rice caused by Curvularia lunata from Uttar Pradesh. Int J Agric Sci Res 3(5):13–16

Kandan A, Akhtar J, Singh B, Dixit D, Chand D, Roy A, Rajkumar S, Agarwal PC (2014) Molecular diversity of Bipolaris oryzae infecting Oryza sativa in India. Phytoparasitica 43(1):5–14

Kandan A, Akhtar J, Singh B, Pal D, Chand D, Rajkumar S, Agarwal PC (2016) Genetic diversity analysis of fungal pathogen Bipolaris sorghicola infecting Sorghum bicolor in India. J Environ Biol 37(6):1323–1330

Kang HW, Park DS, Park YJ, You CH, Lee BM, Eun MY, Go SJ (2002) Fingerprinting of diverse genomes using PCR with universal rice primers generated from repetitive sequence of Korean weedy rice. Mol Cells 13:281–287

Khare MN, Tiwari SP, Sharma YK (2014) Disease problems in the cultivation of I. Cumin (Cuminum cyminum L.) II. Caraway (Carum carvi L.) and their management leading to the production of high quality pathogen free seed. Int J Seed Spices 4(1):1–8

Lamare A, Rao SR (2015) Efficacy of RAPD, ISSR and DAMD markers in assessment of genetic variability and population structure of wild Musa acuminata colla. Physiol Mol Biol Plants 21(3):349–358

Lapointe FJ, Legendre P (1995) Comparison tests for dendrograms: a comparative evaluation. J Classif 12:265–282

Liu X, X-h Zhu, Qiu P, Chen W (2012) A correlation-matrix-based hierarchical clustering method for functional connectivity analysis. J Neurosci Methods 211(1):94–102

Mahmodi F, Kadir JB, Puteh A, Pourdad SS, Nasehi A, Soleimani N (2014) Genetic diversity and differentiation of Colletotrichum spp. isolates associated with leguminosae using multigene loci, RAPD and ISSR. Plant Pathol J 30(1):10–24

Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Res 27:209–220

Mathur SB, Kongsdal O (2003) Common laboratory seed health testing method for detecting fungi. International Seed Testing Association, Bassersdorf

Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 70:3321–3323

Peakall R, Smouse PE (2006) GENEALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6:288–295

Powell W, Morgante M, Andre C, Hanafey M, Vogel J, Tingey S, Rafalski A (1996) The comparison of RFLP, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol Breed 2:225–238

Prevost A, Wilkinson MJ (1999) A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theor Appl Genet 98:107–112

Rao PN, Salam MA (1954) Curvularia species from discoloured grains from Hyderabad. J Indian Bot Soc 33:268–271

Rohlf FJ (1998) NTSYS-pc: Numerical taxonomy and multivariate analysis system. Version 2.02i. Biostatistics Inc. Setauket, NY, USA: Exeter Biological Software

Sneath PHA, Sokal RR (1973) Numerical taxonomy: the principles and practice of numerical classification. WH Freeman and Company, San Francisco

Wang X-D, Gao Z-G, Yao Y, Liu X, Su J, Li W-Y (2014) Genetic diversity of Curvularia lunata by UP-PCR and ISSR analysis. Acta Agric Bor-Sin 29(3):227–233

Yago JI, Roh J-H, Bae S, Yoon Y-N, Kim H-J, Nam M (2011) The effect of seed-borne mycoflora from sorghum and foxtail millet seeds on germination and disease transmission. Mycobiology 39(3):206–218