Effect of rs1108580 of DBH and rs1006737 of CACNA1C on Cognition and Tardive Dyskinesia in a North Indian Schizophrenia Cohort
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Howes OD, Kapur S (2009) The dopamine hypothesis of schizophrenia: version III – the final common pathway. Schizophr Bull 35(3):549–562. https://doi.org/10.1093/schbul/sbp006
Gonzalez-Lopez E, Vrana KE (2019) Dopamine beta-hydroxylase and its genetic variants in human health and disease. J Neurochem. https://doi.org/10.1111/jnc.14893
Punchaichira TJ, Prasad S, Deshpande SN, Thelma BK (2016) Deep sequencing identifies novel regulatory variants in the distal promoter region of the dopamine-beta-hydroxylase gene. Pharmacogenet Genomics 26(7):311–323. https://doi.org/10.1097/FPC.0000000000000214
Punchaichira TJ, Deshpande SN, Thelma BK (2018) Determination of dopamine-beta-hydroxylase activity in human serum using UHPLC-PDA detection. Neurochem Res 43(12):2324–2332. https://doi.org/10.1007/s11064-018-2653-1
Yamamoto K, Cubells JF, Gelernter J, Benkelfat C, Lalonde P, Bloom D, Lal S, Labelle A, Turecki G, Rouleau GA, Joober R (2003) Dopamine beta-hydroxylase (DBH) gene and schizophrenia phenotypic variability: a genetic association study. Am J Med Genet B Neuropsychiatr Genet 117B(1):33–38. https://doi.org/10.1002/ajmg.b.10011
Barrie ES, Weinshenker D, Verma A, Pendergrass SA, Lange LA, Ritchie MD, Wilson JG, Kuivaniemi H, Tromp G, Carey DJ, Gerhard GS, Brilliant MH, Hebbring SJ, Cubells JF, Pinsonneault JK, Norman GJ, Sadee W (2014) Regulatory polymorphisms in human DBH affect peripheral gene expression and sympathetic activity. Circ Res 115(12):1017–1025. https://doi.org/10.1161/CIRCRESAHA.116.304398
Srivastava V, Deshpande SN, Thelma BK (2010) Dopaminergic pathway gene polymorphisms and genetic susceptibility to schizophrenia among north Indians. Neuropsychobiology 61(2):64–70. https://doi.org/10.1159/000265131
Sun Z, Ma Y, Li W, He J, Li J, Yang X, Mao P, Cubells JF, Tang YL (2018) Associations between the DBH gene, plasma dopamine beta-hydroxylase activity and cognitive measures in Han Chinese patients with schizophrenia. Schizophr Res 193:58–63. https://doi.org/10.1016/j.schres.2017.06.028
Chamberlain SR, Robbins TW (2013) Noradrenergic modulation of cognition: therapeutic implications. J Psychopharmacol 27(8):694–718. https://doi.org/10.1177/0269881113480988
Punchaichira TJ, Mukhopadhyay A, Kukshal P, Bhatia T, Deshpande SN, Thelma BK (2020) Association of regulatory variants of dopamine beta-hydroxylase with cognition and tardive dyskinesia in schizophrenia subjects. J Psychopharmacol 34(3):358–369. https://doi.org/10.1177/0269881119895539
Dolmetsch RE, Pajvani U, Fife K, Spotts JM, Greenberg ME (2001) Signaling to the nucleus by an L-type calcium channel-calmodulin complex through the MAP kinase pathway. Science 294(5541):333–339. https://doi.org/10.1126/science.1063395
Gershon ES, Grennan K, Busnello J, Badner JA, Ovsiew F, Memon S, Alliey-Rodriguez N, Cooper J, Romanos B, Liu C (2014) A rare mutation of CACNA1C in a patient with bipolar disorder, and decreased gene expression associated with a bipolar-associated common SNP of CACNA1C in brain. Mol Psychiatry 19(8):890–894. https://doi.org/10.1038/mp.2013.107
Nyegaard M, Demontis D, Foldager L, Hedemand A, Flint TJ, Sorensen KM, Andersen PS, Nordentoft M, Werge T, Pedersen CB, Hougaard DM, Mortensen PB, Mors O, Borglum AD (2010) CACNA1C (rs1006737) is associated with schizophrenia. Mol Psychiatry 15(2):119–121. https://doi.org/10.1038/mp.2009.69
Ripke S, O'Dushlaine C, Chambert K, Moran JL, Kahler AK, Akterin S, Bergen SE, Collins AL et al (2013) Genome-wide association analysis identifies 13 new risk loci for schizophrenia. Nat Genet 45(10):1150–1159. https://doi.org/10.1038/ng.2742
Yoshimizu T, Pan JQ, Mungenast AE, Madison JM, Su S, Ketterman J, Ongur D, McPhie D et al (2015) Functional implications of a psychiatric risk variant within CACNA1C in induced human neurons. Mol Psychiatry 20(2):284. https://doi.org/10.1038/mp.2014.181
Mallas E, Carletti F, Chaddock CA, Shergill S, Woolley J, Picchioni MM, McDonald C, Toulopoulou T, Kravariti E, Kalidindi S, Bramon E, Murray R, Barker GJ, Prata DP (2017) The impact of CACNA1C gene, and its epistasis with ZNF804A, on white matter microstructure in health, schizophrenia and bipolar disorder(1). Genes Brain Behav 16(4):479–488. https://doi.org/10.1111/gbb.12355
Tecelao D, Mendes A, Martins D, Fu C, Chaddock CA, Picchioni MM, McDonald C, Kalidindi S, Murray R, Prata DP (2019) The effect of psychosis associated CACNA1C, and its epistasis with ZNF804A, on brain function. Genes Brain Behav 18(4):e12510. https://doi.org/10.1111/gbb.12510
Zhu D, Yin J, Liang C, Luo X, Lv D, Dai Z, Xiong S, Fu J, Li Y, Lin J, Lin Z, Wang Y, Ma G (2019) CACNA1C (rs1006737) may be a susceptibility gene for schizophrenia: an updated meta-analysis. Brain Behav 9(6):e01292. https://doi.org/10.1002/brb3.1292
Quigley H, MacCabe JH (2019) The relationship between nicotine and psychosis. Ther Adv Psychopharmacol 9:2045125319859969. https://doi.org/10.1177/2045125319859969
Peterson RE, Bigdeli TB, Ripke S, Bacanu SA, Gejman PV, Levinson DF, Li QS, Rujescu D et al (2021) Genome-wide analyses of smoking behaviors in schizophrenia: findings from the psychiatric genomics consortium. J Psychiatr Res 137:215–224. https://doi.org/10.1016/j.jpsychires.2021.02.027
Tiwari AK, Deshpande SN, Rao AR, Bhatia T, Lerer B, Nimgaonkar VL, Thelma BK (2005) Genetic susceptibility to tardive dyskinesia in chronic schizophrenia subjects: III. Lack of association of CYP3A4 and CYP2D6 gene polymorphisms. Schizophr Res 75(1):21–26. https://doi.org/10.1016/j.schres.2004.12.011
Nurnberger JI Jr, Blehar MC, Kaufmann CA, York-Cooler C, Simpson SG, Harkavy-Friedman J, Severe JB, Malaspina D, Reich T (1994) Diagnostic interview for genetic studies. Rationale, unique features, and training. NIMH Genetics Initiative. Arch Gen Psychiatry 51(11):849–859 discussion 863-844
Guy W (1976) National institute of mental health (U.S.). Psychopharmacology research branch early clinical drug evaluation program. Ecdeu assessment manual for psychopharmacology. Rev ed. Rockville Md: U.S. Dept. of health education and welfare public health service alcohol drug abuse and mental health administration national institute of mental health psychopharmacology research branch division of extramural research programs 534–537
Kay SR, Fiszbein A, Opler LA (1987) The positive and negative syndrome scale (PANSS) for schizophrenia. Schizophr Bull 13(2):261–276. https://doi.org/10.1093/schbul/13.2.261
Wallwork RS, Fortgang R, Hashimoto R, Weinberger DR, Dickinson D (2012) Searching for a consensus five-factor model of the positive and negative syndrome scale for schizophrenia. Schizophr Res 137(1-3):246–250. https://doi.org/10.1016/j.schres.2012.01.031
Fervaha G, Foussias G, Agid O, Remington G (2014) Motivational and neurocognitive deficits are central to the prediction of longitudinal functional outcome in schizophrenia. Acta Psychiatr Scand 130(4):290–299. https://doi.org/10.1111/acps.12289
Gur RC, Ragland JD, Moberg PJ, Turner TH, Bilker WB, Kohler C, Siegel SJ, Gur RE (2001) Computerized neurocognitive scanning: I. Methodology and validation in healthy people. Neuropsychopharmacology 25(5):766–776. https://doi.org/10.1016/S0893-133X(01)00278-0
Bhatia T, Agarwal A, Shah G, Wood J, Richard J, Gur RE, Gur RC, Nimgaonkar VL, Mazumdar S, Deshpande SN (2012) Adjunctive cognitive remediation for schizophrenia using yoga: an open, non-randomized trial. Acta Neuropsychiatr 24(2):91–100. https://doi.org/10.1111/j.1601-5215.2011.00587.x
Kassambara A (2019) Ggcorrplot: visualization of a correlation matrix using 'ggplot2'. R package version 0.1.3
Kassambara A (2017) R Graphics essentials for great data visualization: statistical tools for high-throughput data analysis. Available from: https://goo.gl/oT8Ra6
Kassambara A, Mundt F (2020) Factoextra: extract and visualize the results of multivariate data analyses R package version 1.0.7
Kassambara A (2017) Practical guide to cluster analysis in r unsupervised machine learning: statistical tools for high-throughput data analysis. Available from: https://goo.gl/DmJ5y5
Schloerke B, Cook D, Larmarange J, Briatte F, Marbach M, Thoen E, Elberg A, Crowley J (2021) GGally: extension to 'ggplot2'. R package version 2.1.2
Andreasen NC, Olsen S (1982) Negative v positive schizophrenia. Definition and validation. Arch Gen Psychiatry 39(7):789–794. https://doi.org/10.1001/archpsyc.1982.04290070025006
Endicott J, Spitzer RL, Fleiss JL, Cohen J (1976) The global assessment scale. A procedure for measuring overall severity of psychiatric disturbance. Arch Gen Psychiatry 33(6):766–771. https://doi.org/10.1001/archpsyc.1976.01770060086012
Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA, Bender D, Maller J, Sklar P, de Bakker PI, Daly MJ, Sham PC (2007) PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 81(3):559–575. https://doi.org/10.1086/519795
Gauderman WJ, Morrison JM (2006) QUANTO 1.1: a computer program for power and sample size calculations for genetic-epidemiology studies http://biostats.usc.edu/Quanto.html. Accessed 13 Sept 2019
Benjamini Y, Krieger AM, Yekutieli D (2006) Adaptive linear step-up procedures that control the false discovery rate. Biometrika 93(3):491–507. https://doi.org/10.1093/biomet/93.3.491
Josse J, Fo H (2016) missMDA: a package for handling missing values in multivariate data analysis. J Statistic Softw 70(1):1–31. https://doi.org/10.18637/jss.v070.i01
Lê S, Josse J, Husson F (2008) FactoMineR: an R package for multivariate analysis. J Statisti Softw 25(1):1–18. https://doi.org/10.18637/jss.v025.i01
Kassambara A (2017) Practical guide to principal component methods. In R: statistical tools for high-throughput data analysis. Available from: http://goo.gl/d4Doz9
Sczekan SR, Strumwasser F (1996) Antipsychotic drugs block IP3-dependent Ca(2+)-release from rat brain microsomes. Biol Psychiatry 40(6):497–502. https://doi.org/10.1016/0006-3223(95)00657-5
Eckart N, Song Q, Yang R, Wang R, Zhu H, McCallion AS, Avramopoulos D (2016) Functional characterization of schizophrenia-associated variation in CACNA1C. PLoS One 11(6):e0157086. https://doi.org/10.1371/journal.pone.0157086
Song JHT, Lowe CB, Kingsley DM (2018) Characterization of a human-specific tandem repeat associated with bipolar disorder and schizophrenia. Am J Hum Genet 103(3):421–430. https://doi.org/10.1016/j.ajhg.2018.07.011
Harrison PJ, Tunbridge EM, Dolphin AC, Hall J (2019) Voltage-gated calcium channel blockers for psychiatric disorders: genomic reappraisal. Br J Psychiatry:1–4. https://doi.org/10.1192/bjp.2019.157
Hall NAL, Tunbridge EM (2022) Brain-enriched CACNA1C isoforms as novel, selective targets for psychiatric indications. Neuropsychopharmacology 47(1):393–394. https://doi.org/10.1038/s41386-021-01114-2
Chamberlain SR, Muller U, Blackwell AD, Robbins TW, Sahakian BJ (2006) Noradrenergic modulation of working memory and emotional memory in humans. Psychopharmacology (Berl) 188(4):397–407. https://doi.org/10.1007/s00213-006-0391-6
Zhang Q, Shen Q, Xu Z, Chen M, Cheng L, Zhai J, Gu H, Bao X, Chen X, Wang K, Deng X, Ji F, Liu C, Li J, Dong Q, Chen C (2012) The effects of CACNA1C gene polymorphism on spatial working memory in both healthy controls and patients with schizophrenia or bipolar disorder. Neuropsychopharmacology 37(3):677–684. https://doi.org/10.1038/npp.2011.242
Essali A, Soares-Weiser K, Bergman H, Adams CE (2018) Calcium channel blockers for antipsychotic-induced tardive dyskinesia. Cochrane Database Syst Rev 3(3):CD000206. https://doi.org/10.1002/14651858.CD000206.pub4
