Comparative transcriptome analyses of a mangrove tree Sonneratia caseolaris and its non-mangrove relatives, Trapa bispinosa and Duabanga grandiflora

Marine Genomics - Tập 31 - Trang 13-15 - 2017
Jianfang Li1, Yuchen Yang1, Shuhuan Yang1, Zhang Zhang1, Sufang Chen1, Cairong Zhong2, Renchao Zhou1, Suhua Shi1
1State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, Sun Yat-sen University, Guangzhou 510275, China
2Hainan Dongzhai Harbour National Nature Reserve, Haikou 571129, China

Tài liệu tham khảo

Chen, 2011, Transcriptome sequencing of a highly salt tolerant mangrove species Sonneratia alba using Illumina platform, Mar. Genomics, 4, 129, 10.1016/j.margen.2011.03.005 Dassanayake, 2009, Shedding light on an extremophile lifestyle through transcriptomics, New Phytol., 183, 764, 10.1111/j.1469-8137.2009.02913.x Duke, 1998, Factors influencing biodiversity and distributional gradients in mangroves, Global Ecol. Biogeogr. Lett., 7, 27, 10.2307/2997695 Fu, 2004, Isolating high-quality RNA from mangroves without liquid nitrogen, Plant Mol. Biol. Rep., 22, 197, 10.1007/BF02772728 Hoagland, 1950, The water-culture method for growing plants without soil, Circ. Calif. Agric. Exp. Stn., 347 Huang, 2014, Transcriptome sequencing and analysis of leaf tissue of Avicennia marina using the Illumina platform, PLoS One, 9 Kipp, 2013, The effects of heat stress on reactive oxygen species production and chlorophyll concentration in Arabidopsis thaliana, Res. Plant Sci., 1, 20 Tomlinson, 1986 Yang, 2015, Phylogenetic position of Sonneratia griffithii based on sequences of the nuclear ribosomal internal transcribed spacer and 13 nuclear genes, J. Syst. Evol., 53, 47, 10.1111/jse.12102 Yang, 2015, Transcriptome analysis of the Holly mangrove Acanthus ilicifolius and its terrestrial relative, Acanthus leucostachys, provides insights into adaptation to intertidal zones, BMC Genomics, 16, 605, 10.1186/s12864-015-1813-9 Yang, 2015, De novo assembly of the transcriptomes of two yellow mangroves, Ceriops tagal and C. zippeliana, and one of their terrestrial relatives, Pellacalyx yunnanensis, Mar. Genomics, 23, 33, 10.1016/j.margen.2015.04.003 Yasumoto, 1999, Uptake of inorganic ions and compatible solutes in cultured mangrove cells during salt stress, In Vitro Cell. Dev. Biol. Plant., 35, 82, 10.1007/s11627-999-0015-z