Bacterial community of pond's water, sediment and in the guts of tilapia (Oreochromis niloticus) juveniles characterized by fluorescentin situhybridization technique

Al-Harbi, 2003, Quantitative and qualitative studies on bacterial flora of hybrid tilapia (Oreochromis niloticus X O. aureus) cultured in earthen ponds in Saudi Arabia, Aquaculture Research, 34, 43, 10.1046/j.1365-2109.2003.00791.x

Al-Harbi, 2005, Bacterial diversity of tilapia (Oreochromis niloticus) cultured in brackish water in Saudi Arabia, Aquaculture, 250, 566, 10.1016/j.aquaculture.2005.01.026

Aly, 2008, Characterization of some bacteria isolated of Oreochromis niloticus and their potential use as probiotics, Aquaculture, 277, 1, 10.1016/j.aquaculture.2008.02.021

Asfie, 2003, Characterization of the goldfish fecal microflora by the fluorescent in situ hybridization method, Fisheries Science, 69, 21, 10.1046/j.1444-2906.2003.00583.x

Balcázar, 2006, The role of probiotics in aquaculture, Veterinary Microbiology, 114, 171, 10.1016/j.vetmic.2006.01.009

Balcázar, 2010, Phylogenetic characterization and in situ detection of bacterial communities associated with seahorses (Hippocampus guttulatus) in captivity, Systematic and Applied Microbiology, 33, 71, 10.1016/j.syapm.2009.11.005

Beveridge, 1989, The ingestion of bacteria in suspension by the tilapia Oreochromis niloticus, Aquaculture, 81, 373, 10.1016/0044-8486(89)90161-0

Blasco, 2003, Development of specific fluorescent oligonucleotide probes for in situ identification of wine lactic acid bacteria, FEMS Microbiology Letters, 225, 115, 10.1016/S0378-1097(03)00501-9

Boye, 1995, Application of a strain-specific rRNA oligonucleotide probe targeting Pseudomonas fluorescens Ag1 in a mesocosm study of bacterial release into the environment, Applied and Environmental Microbiology, 61, 1384, 10.1128/AEM.61.4.1384-1390.1995

Buchanan, 2008, Strain-associated virulence factors of Streptococcus iniae in hybrid-striped bass, Veterinary Microbiology, 131, 145, 10.1016/j.vetmic.2008.02.027

Cottrell, 2003, Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary, Limnology and Oceanography, 48, 168, 10.4319/lo.2003.48.1.0168

Cytryn, 2006, Transient development of filamentous Thiothrix species in a marine sulfide oxidizing, denitrifying fluidized bed reactor, FEMS Microbiology Letters, 256, 22, 10.1111/j.1574-6968.2006.00108.x

Del'Duca, 2013, Evaluation of the presence and efficiency of potential probiotic bacteria in the gut of tilapia (Oreochromis niloticus) using the fluorescent in situ hybridization, Aquaculture, 388-391, 115, 10.1016/j.aquaculture.2013.01.019

Dhanasiri, 2011, Changes in the intestinal microbiota in wild Atlantic cod Gadus morhua L. upon captive rearing, Microbial Ecology, 61, 20, 10.1007/s00248-010-9673-y

Epstein, 1995, Enumeration of sandy sediment bacteria: search for optimal protocol, Marine Ecology Progress Series, 117, 289, 10.3354/meps117289

Erondu, 2005, Potential hazards and risks associated with aquaculture industry, African Journal of Biotechnology, 4, 1662

Flick, 2008, Bacterial, chemical, residues impact tilapia quality, Global Aquaculture Advocate, 11, 32

Garcia, 2007, Quantification by fluorescent in situ hybridization of bacteria associated with Litopenaeus vannamei larvae in Mexican shrimp hatchery, Aquaculture, 262, 211, 10.1016/j.aquaculture.2006.10.039

Gatesoupe, 1999, The use of probiotics in aquaculture, Aquaculture, 180, 147, 10.1016/S0044-8486(99)00187-8

Ghosh, 2007, Isolation of putative probionts from intestine of major Indian major carps, The Israeli Journal of Aquaculuture-Bamidgeh, 59, 127

Gram, 1999, Inhibition of Vibrio anguillarum by Pseudomonas fluorescens AH2, a possible probiotic treatment of fish, Applied and Environmental Microbiology, 65, 969, 10.1128/AEM.65.3.969-973.1999

Grimoud, 2010, In vitro screening of probiotic lactic acid bacteria and prebiotic glucooligosaccharides to select effective synbiotics, Anaerobe, 16, 493, 10.1016/j.anaerobe.2010.07.005

Hagi, 2004, Diversity and seasonal changes in lactic acid bacteria in the intestinal tract of cultured freshwater fish, Aquaculture, 234, 335, 10.1016/j.aquaculture.2004.01.018

Hopkins, 2001, Age and disease related changes in intestinal bacterial populations assessed by cell culture, 16S rRNA abundance, and community cellular fatty acid profiles, Gut, 48, 198, 10.1136/gut.48.2.198

Huber, 2004, Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout (Oncorhynchus mykiss, Walbaum), Journal of Applied Microbiology, 96, 117, 10.1046/j.1365-2672.2003.02109.x

Huggett, 2008, Recruitment of the sea urchin Heliocidaris erythrogramma and the distribution and abundance of inducing bacteria in the field, Aquatic Microbial Ecology, 53, 161, 10.3354/ame01239

Inglis, 2001, Bacterial Diseases of Fish

Jatobá, 2008, Lactic-acid bacteria isolated from the intestinal tract of Nile tilapia utilized as probiotic, Pesquisa Agropecuária Brasileira, 43, 1201, 10.1590/S0100-204X2008000900015

Kesacordi-Watson, 2008, Probiotics in aquaculture: the need, principles and mechanisms of action and screening processes, Aquaculture, 274, 1, 10.1016/j.aquaculture.2007.11.019

Mandal, 2009, Coliform bacteria in Nile tilapia, Oreochromis niloticus of shrimp-gher, pond and fish market, World Journal of Fish and Marine Science, 1, 160

Martiny, 2006, Microbial biogeography: putting microorganisms on the map, Nature Reviews Microbiology, 4, 102, 10.1038/nrmicro1341

Moriarty, 1997, The role of microorganisms in aquaculture ponds, Aquaculture, 151, 333, 10.1016/S0044-8486(96)01487-1

Moriarty, 1999, Proceedings of the 8th International Symposium on Microbial Ecology, 237

Moter, 2000, Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms, Journal of Microbiological Methods, 41, 85, 10.1016/S0167-7012(00)00152-4

Nayak, 2010, Probiotics and immunity: a fish perspective, Fish and Shellfish Immunology, 29, 2, 10.1016/j.fsi.2010.02.017

Nayak, 2011, Screening of gastrointestinal bacteria of major carps for a candidate probiotic species for aquaculture practices, Aquaculture Research, 42, 1034, 10.1111/j.1365-2109.2010.02686.x

Panigrahi, 2007, Microbial intervention for better fish health in aquaculture: the Indian scenario, Fish Physiology and Biochemistry, 33, 429, 10.1007/s10695-007-9160-7

Paungfoo, 2007, Nitrifying bacterial communities in an aquaculture wastewater treatment system using fluorescence in situ hybridization (FISH), 16S rRNA gene cloning, and phylogenetic analysis, Biotechnology and Bioengineering, 97, 985, 10.1002/bit.21270

Payne, 2007, Microbial diversity within early-stage cultured Panulirus ornatus Phyllosomas, Applied and Environmental Microbiology, 73, 1940, 10.1128/AEM.02520-06

Pereira, 2011, Evaluating seasonal dynamics of bacterial communities in marine fish aquaculture: a preliminary study before applying phage therapy, Journal of Environmental Monitoring, 13, 1053, 10.1039/c0em00434k

Pond, 2006, Comparison of convetional and molecular techniques to investigate the intestinal microflora of rainbow trout (Oncorhynchus mykiss), Aquaculture, 261, 194, 10.1016/j.aquaculture.2006.06.037

Ravi, 2007, Screening and evaluation of probiotics as a biocontrol agent against pathogenic Vibrios in marine aquaculture, Letters in Applied Microbiology, 45, 219, 10.1111/j.1472-765X.2007.02180.x

Ringo, 1998, Lactic acid bacteria in fish: a review, Aquaculture, 160, 177, 10.1016/S0044-8486(97)00299-8

Ringo, 2003, Electron microscopy of the intestinal microflora of fish, Aquaculture, 227, 395, 10.1016/j.aquaculture.2003.05.001

Salzman, 2002, Analysis of 16S libraries of mouse gastrointestinal microflora reveals a large new group of mouse intestinal bacteria, Microbiology, 148, 3651, 10.1099/00221287-148-11-3651

Soto, 2009, Franciella sp., an emerging pathogen of tilapia, Oreochromis niloticus (L.), in Costa Rica, Journal of Fish Diseases, 32, 713, 10.1111/j.1365-2761.2009.01070.x

Sousa, 2001, Bacterial community associated with fish and water from Congonhas river, Sertaneja, Paraná, Brazil, Brazilian Archives of Biology and Technology, 44, 373, 10.1590/S1516-89132001000400007

Spangaard, 2000, The microbial of rainbow trout intestine: a comparasion of traditional and molecular indetification, Aquaculture, 182, 1, 10.1016/S0044-8486(99)00250-1

Tamura, 2009, Lactobacillus collinoides JCM1123T: effects on mouse plasma cholesterol and isoflavonoids in the caecum, Antonie van Leeuwenhoek, 96, 621, 10.1007/s10482-009-9376-x

Tuo, 2011, In vitro assessment of immunomodulating activity of the two Lactobacillus strains isolated from traditional fermented milk, World Journal of Microbiology and Biotechnology, 27, 505, 10.1007/s11274-010-0482-8

Vezzulli, 2002, Bacterial community structure and activity in fish farm sediments of the Ligurian sea (Western Mediterranean), Aquaculture International, 10, 123, 10.1023/A:1021365829687

Walling, 2010, Vibrio nigripulchritudo monitoring and strain dynamics in shrimp pond sediment, Journal of Applied Microbiology, 108, 2003

Yokokawa, 2005, Growth and grazing mortality rates of phylogenetic groups of bacterioplankton in coastal marine environments, Applied and Environmental Microbiology, 71, 6799, 10.1128/AEM.71.11.6799-6807.2005

Zar, 1999, Biostatical Analysis

Zeng, 2010, Bacterial diversity in various coastal mariculture ponds in Southeast China and in diseased eels as revealed by culture and culture-independent molecular techniques, Aquaculture Research, 41, 172, 10.1111/j.1365-2109.2010.02499.x

Zhang, 2009, Identification and characterization of a virulence-associated protease from a pathogenic Pseudomonas fluorescens strain, Veterinary Microbiology, 139, 183, 10.1016/j.vetmic.2009.04.026

Zhou, 2010, Effect of treatment with probiotics as water additives on tilapia (Oreochromis niloticus) growth performance and immune response, Fish Physiology and Biochemistry, 36, 501, 10.1007/s10695-009-9320-z

Zwirglmaier, 2005, Fluorescent in situ hybridization (FISH) - The next generation, FEMS Microbiology Letters, 246, 151, 10.1016/j.femsle.2005.04.015