A minimalist peptide ligand for IgG by minimizing the binding domain of protein A

Biochemical Engineering Journal - Tập 151 - Trang 107327 - 2019
Weiying Wang1,2, Dongxia Hao2, Jia Ge2, Lan Zhao2, Yongdong Huang2, Kai Zhu2, Xvexing Wu2, Zhiguo Su2, Rong Yu1, Guanghui Ma2
1Key Laboratory of Drug Targeting and Drug Delivery System, Ministry of Education, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
2State Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing 100190, China

Tài liệu tham khảo

Liu, 2014, The history of monoclonal antibody development - Progress, remaining challenges and future innovations, Ann. Med. Surg. (Lond.), 3, 113, 10.1016/j.amsu.2014.09.001

Kaplon, 2019, Antibodies to watch in 2019, Mabs-Austin, 11, 219, 10.1080/19420862.2018.1556465

Bianco, 2005, Monoclonal antibodies targeting the epidermal growth factor receptor, Curr. Drug Targets, 6, 275, 10.2174/1389450053765842

Lambour, 2016, Converting monoclonal antibody-based immunotherapies from passive to active: bringing immune complexes into play, Emerg. Microbes Infect., 5, 9, 10.1038/emi.2016.97

Li, 2010, Research and development of next generation of antibody-based therapeutics, Acta Pharmacol. Sin., 31, 1198, 10.1038/aps.2010.120

Hjelm, 1975, Isolation of IgG3 from normal human sera and from a patient with multiple myeloma by using protein A-sepharose 4B, Scand. J. Immunol., 4, 633, 10.1111/j.1365-3083.1975.tb02671.x

Ghose, 2007, Binding capacity differences for antibodies and Fc-fusion proteins on protein A chromatographic materials, Biotechnol. Bioeng., 96, 768, 10.1002/bit.21044

Swinnen, 2007, Performance comparison of protein A affinity resins for the purification of monoclonal antibodies, J. Chromatogr. B, 848, 97, 10.1016/j.jchromb.2006.04.050

Bloom, 1989, Detection and reduction of protein A contamination in immobilized protein A purified monoclonal antibody preparations, J. Immunol. Methods, 117, 83, 10.1016/0022-1759(89)90121-X

Fassina, 2001, Novel ligands for the affinity-chromatographic purification of antibodies, J. Biochem. Biophys. Methods, 49, 481, 10.1016/S0165-022X(01)00215-9

Yang, 2005, Hexamer peptide affinity resins that bind the Fc region of human immunoglobulin G, J. Pept. Res., 66, 120, 10.1111/j.1747-0285.2006.00342.x

Moiani, 2009, Structural characterization of a protein a mimetic peptide dendrimer bound to human IgG, J. Phys. Chem. B, 113, 16268, 10.1021/jp909405b

Lund, 2012, Novel peptide ligand with high binding capacity for antibody purification, J. Chromatogr. A, 1225, 158, 10.1016/j.chroma.2011.12.074

Menegatti, 2013, mRNA display selection and solid-phase synthesis of Fc-binding cyclic peptide affinity ligands, Biotechnol. Bioeng., 110, 857, 10.1002/bit.24760

Tsai, 2014, Strategy of fc-recognizable peptide ligand design for oriented immobilization of antibody, Anal. Chem., 86, 2931, 10.1021/ac4029467

Huang, 1999, Affinity chromatographic screening of soluble combinatorial peptide libraries, Biotechnol. Bioeng., 63, 633, 10.1002/(SICI)1097-0290(19990620)63:6<633::AID-BIT1>3.0.CO;2-C

Yoo, 2015, Identification of a peptide ligand for antibody immobilization on biosensor surfaces, Biochip J., 10, 88, 10.1007/s13206-016-0202-z

Ehrlich, 2001, Identification of model peptides as affinity ligands for the purification of humanized monoclonal antibodies by means of phage display, J. Biochem. Biophys. Methods, 49, 443, 10.1016/S0165-022X(01)00212-3

Zhao, 2014, Biomimetic design of affinity peptide ligands for human IgG based on protein A-IgG complex, Biochem. Eng. J., 88, 1, 10.1016/j.bej.2014.03.015

Raveh, 2010, Sub-angstrom modeling of complexes between flexible peptides and globular proteins, Proteins, 78, 2029, 10.1002/prot.22716

DeLano, 2000, Convergent solutions to binding at a protein-protein interface, Science, 287, 1279, 10.1126/science.287.5456.1279

Frick, 1992, Convergent evolution among immunoglobulin G-binding bacterial proteins, Proc. Natl. Acad. Sci. U. S. A., 89, 8532, 10.1073/pnas.89.18.8532

Wang, 2014, Analysis of the linear epitope for Fc-binding on the mouse IgG Fc receptor (moFc gamma RI) by synthetic peptide, Genet. Mol. Res., 13, 4647, 10.4238/2014.June.18.7

Sengupta, 1999, Molecular modeling and experimental approaches toward designing a minimalist protein having Fc-binding activity of Staphylococcal protein A, Biochem. Biophys. Res. Commun., 256, 6, 10.1006/bbrc.1999.0198

Braisted, 1996, Minimizing a binding domain from protein A, Proc. Natl. Acad. Sci. U. S. A., 93, 5688, 10.1073/pnas.93.12.5688

Meyer, 2003, NMR Spectroscopy techniques for screening and identifying ligand binding to protein receptors, Angew. Chem.-Int. Edit., 42, 864, 10.1002/anie.200390233

Johnson, 2004, Saturation-transfer difference NMR studies for the epitope mapping of a carbohydrate-mimetic peptide recognized by an anti-carbohydrate antibody, Bioorg. Med. Chem., 12, 295, 10.1016/j.bmc.2003.09.041

Cala, 2015, Ligand-orientation based fragment selection in STD NMR screening, J. Med. Chem., 58, 8739, 10.1021/acs.jmedchem.5b01114

Szczepina, 2011, Investigation of the binding of a carbohydrate-mimetic peptide to its complementary anticarbohydrate antibody by STD-NMR spectroscopy and molecular-dynamics simulations, Chem.-Eur. J., 17, 11446, 10.1002/chem.201100222

Ayyar, 2012, Affinity chromatography as a tool for antibody purification, Methods, 56, 116, 10.1016/j.ymeth.2011.10.007

Daoud-Attieh, 2013, Immunoglobulin G purification from bovine serum with pseudo-specific supermacroporous cryogels, Sep. Purif. Technol., 118, 816, 10.1016/j.seppur.2013.08.026

Naik, 2011, AbSep-An amino acid based pseudobioaffinity adsorbent for the purification of immunoglobulin G, J. Chromatogr. A, 1218, 1756, 10.1016/j.chroma.2011.01.083

Deisenhofer, 1981, Crystallographic refinement and atomic models of a human Fc fragment and its complex with fragment B of protein A from Staphylococcus aureus at 2.9- and 2.8-.ANG, resolution, Biochemistry, 20, 2361, 10.1021/bi00512a001

Li, 1998, Design, synthesis, and application of a Protein A mimetic, Nat. Biotechnol., 16, 190, 10.1038/nbt0298-190

Dias, 2006, Protein ligand design: from phage display to synthetic protein epitope mimetics in human antibody Fc-binding peptidomimetics, J. Am. Chem. Soc., 128, 2726, 10.1021/ja057513w

Wei, 2015, Development of novel small peptide ligands for antibody purification, RSC Adv., 5, 67093, 10.1039/C5RA07829F

Huang, 2011, Molecular mechanism of the affinity interactions between protein a and human innmunoglobulin G1 revealed by molecular simulations, J. Phys. Chem. B, 115, 4168, 10.1021/jp111216g

Viegas, 2011, Saturation-transfer difference (STD) NMR: a simple and fast method for ligand screening and characterization of protein binding, J. Chem. Educ., 88, 990, 10.1021/ed101169t

Fielding, 2007, NMR methods for the determination of protein–ligand dissociation constants, Prog. Nucl. Magn. Reson. Spectrosc., 51, 219, 10.1016/j.pnmrs.2007.04.001

Bai, 2014, Purification of supercoiled plasmid DNA from clarified bacterial lysate by arginine-affinity chromatography: effects of spacer arms and ligand density, J. Sep. Sci., 37, 1386, 10.1002/jssc.201400092

Bansal, 2014, Effect of spacer arm length on protein binding capacity of an affinity membrane, Abstr. Pap. Am. Chem. Soc., 247, 1

Zhao, 2017, Enhanced binding by dextran-grafting to Protein A affinity chromatographic media, J. Sep. Sci., 40, 1493, 10.1002/jssc.201601196

Hahn, 2005, Comparison of protein A affinity sorbents II. Mass transfer properties, J. Chromatogr. A, 1093, 98, 10.1016/j.chroma.2005.07.050

Wang, 2016, New tetrapeptide ligands designed for antibody purification with biomimetic chromatography: molecular simulation and experimental validation, Biochem. Eng. J., 114, 194, 10.1016/j.bej.2016.06.030