A brief review of bioluminescent systems (2019)

Abe K, Kumagai T, Takahashi C, Kezuka A, Murakami Y, Osawa Y, Motoki H et al (2012) Detection of pathogenic bacteria by using zinc finger protein fused with firefly luciferase. Anal Chem 84(18):8028–8032

Abraham EH, Salikhova AY, Hug EB (2003) Critical ATP Parameters associated with blood and mammalian cells: relevant measurement techniques. Drug Dev Res 59(1):152–160

Arai R, Nakagawa H, Kitayama A, Ueda H, Nagamune T (2002) Detection of protein–protein interaction by bioluminescence resonance energy transfer from firefly luciferase to red fluorescent protein. J Biosci Bioeng 94(4):362–364

Belas R, Mileham A, Cohn D, Hilman M, Simon M, Silverman M (1982) Bacterial Bioluminescence: isolation and expression of the luciferase genes from Vibrio harveyi. Science 218(4574):791–793

Björkman KM, Karl DM (2001) Novel method for the measurement of dissolved adenosine and guanosine triphosphate in aquatic habitats: applications to marine microbial ecology. J Microbiol Methods 47(2):159–167

Chung E, Yamashita H, Au P, Tannous BA, Fukumura D, Jain RK (2009) Secreted Gaussia luciferase as a biomarker for monitoring tumor progression and treatment response of systemic metastases. PloS One 4(12):e8316

Daubner SC, Astorga AM, Leisman GB, Baldwin TO (1987) Yellow light emission of vibrio fischeri strain Y-1: purification and characterization of the energy-accepting yellow fluorescent protein. Proc Natl Acad Sci USA 84(24):8912–8916

Ellis EA, Oakley TH (2016) High rates of species accumulation in animals with bioluminescent courtship displays. Current Biology: CB 26(14):1916–1921

Francis KP, John D, Bellinger-Kawahara C, Hawkinson MJ, Purchio TF, Contag PR (2000) Monitoring bioluminescent staphylococcus aureus infections in living mice using a novel luxABCDE construct. Infect Immun 68(6):3594–3600

Frank LA, Krasitskaya VV (2014) Application of enzyme bioluminescence for medical diagnostics. Adv Biochem Eng/Biotechnol 144:175–197

Frundzhyan V, Ugarova N (2007) Bioluminescent assay of total bacterial contamination of drinking water. Lumin J Biol Chem Lumin 22(3):241–244

Garrido-Cardenas JA, Manzano-Agugliaro F (2017) The metagenomics worldwide research. Curr Genet 63(5):819–829

Girotti S, Ferri EN, Fumo MG, Maiolini E (2008) Monitoring of environmental pollutants by bioluminescent bacteria. Anal Chim Acta 608(1):2–29

Gregor C, Gwosch KC, Sahl SJ, Hell SW (2018) Strongly enhanced bacterial bioluminescence with the ilux operon for single-cell imaging. Proc Natl Acad Sci USA 115(5):962–967

Haddock SHD, Moline MA, Case JF (2010) Bioluminescence in the sea. Annu Rev Mar Sci 2:443–493

Hall MP, Woodroofe CC, Wood MG, Que I, Root MV, Ridwan Y, Shi C et al (2018) Click beetle luciferase mutant and near infrared naphthyl-luciferins for improved bioluminescence imaging. Nature Commun 9(1):132

Hamdan FF, Audet M, Garneau P, Pelletier J, Bouvier M (2005) High-throughput screening of G protein-coupled receptor antagonists using a bioluminescence resonance energy transfer 1-based β-arrestin2 recruitment assay. J Biomol Screen 10(5):463–475

Hasson SA, Fogel AI, Wang C, MacArthur R, Guha R, Heman-Ackah S, Martin S, Youle RJ, Inglese J (2015) Chemogenomic profiling of endogenous PARK2 expression using a genome-edited coincidence reporter. ACS Chem Biol 10(5):1188–1197

Hattori M, Tanaka M, Takakura H, Aoki K, Miura K, Anzai T, Ozawa T (2013) Analysis of temporal patterns of GPCR–β-arrestin interactions using split luciferase-fragment complementation. Mol bioSyst 9(5):957–964

Hollis RP, Lagido C, Pettitt J, Porter AJ, Killham K, Paton GI, Glover LA (2001) Toxicity of the bacterial luciferase substrate, N-decyl aldehyde, to Saccharomyces cerevisiae and Caenorhabditis elegans. FEBS Lett 506(2):140–142

Johnsen S (2005) The red and the black: bioluminescence and the color of animals in the deep sea. Integr Comp Biol 45(2):234–246

Ke D, Tu SC (2011) Activities, kinetics and emission spectra of bacterial luciferase-fluorescent protein fusion enzymes. Photochem Photobiol 87(6):1346–1353

Kobayashi M, Murakami T, Uchibori R, Chun NAL, Kobayashi E, Morita T, Ozawa K (2010) Establishment and characterization of transplantable, luminescence labeled rat renal cell carcinoma cell lines. J Urol 183(5):2029–2035

Labella AM, Arahal DR, Castro D, Lemos ML, Borrego JJ (2017) Revisiting the genus photobacterium: taxonomy, ecology and pathogenesis. Int Microb 20(1):1–10

Lampinen J, Virta M, Karp M (1995) Use of controlled luciferase expression to monitor chemicals affecting protein synthesis. Appl Environ Microbiol 61(8):2981–2989

Lorenz WW, McCann RO, Longiaru M, Cormier MJ (1991) Isolation and Expression of a cDNA Encoding Renilla Reniformis Luciferase. Proc Natl Acad Sci USA 88(10):4438–4442

Luker KE, Gupta M, Luker GD (2008) Imaging CXCR4 Signaling with firefly luciferase complementation. Anal Chem 80(14):5565–5573

Markova SV, Vysotski ES (2015) Coelenterazine-dependent luciferases. Biochem Biokhimiia 80(6):714–732

Meighen EA (1991) Molecular biology of bacterial bioluminescence. Microbiol Rev 55(1):123–142

Miesenböck G, Rothman JE (1997) Patterns of synaptic activity in neural networks recorded by light emission from synaptolucins. Proc Natl Acad Sci USA 94(7):3402–3407

Minekawa T, Takehara S, Takahashi M, Okamoto H (2013) Development of a highly sensitive bioluminescent enzyme immunoassay for hepatitis B virus surface antigen capable of detecting divergent mutants. Clin Vaccine Immunol CVI 20(8):1255–1265

Nakamura M, Mie M, Kobatake E (2011) Construction of a functional IgG-Binding luciferase fusion protein for the rapid detection of specific bacterial strains. Analyst 136(1):71–72

Noguchi T, Ikeda M, Ohmiya Y, Nakajima Y (2012) A dual-color luciferase assay system reveals circadian resetting of cultured fibroblasts by co-cultured adrenal glands. PloS One 7(5):e37093

Oba Y, Kato SI, Ojika M, Inouye S (2002) Biosynthesis of luciferin in the sea firefly, cypridina hilgendorfii: l-tryptophan is a component in cypridina luciferin. Tetrahedron Lett 43(13):2389–2392

Patergnani S, Baldassari F, Marchi ED, Karkucinska-Wieckowska A, Wieckowski MR, Pinton P (2014) Methods to monitor and compare mitochondrial and glycolytic ATP production. Methods Enzymol 542:313–332

Patterson SS, Dionisi HM, Gupta RK, Sayler GS (2005) Codon optimization of bacterial luciferase (lux) for expression in mammalian cells. J Ind Microbiol Biotechnol 32(3):115–123

Prinz A, Diskar M, Herberg FW (2006) Application of bioluminescence resonance energy transfer (BRET) for biomolecular interaction studies. Chembiochem Eur J Chem Biol 7(7):1007–1012

Radeck J, Fritz G, Mascher T (2017) The cell envelope stress response of bacillus subtilis: from static signaling devices to dynamic regulatory network. Curr Genet 63(1):79–90

Reeve B, Sanderson T, Ellis T, Freemont P (2014) How synthetic biology will reconsider natural bioluminescence and its applications. Adv Biochem Eng/Biotechnol 145:3–30

Saito K, Chang YF, Horikawa K, Hatsugai N, Higuchi Y, Hashida M, Yoshida Y, Matsuda T, Arai Y, Nagai T (2012) Luminescent proteins for high-speed single-cell and whole-body imaging. Nat Commun 3:1262

Shama G, Malik DJ (2013) The Uses and abuses of rapid bioluminescence-based ATP assays. Int J Hyg Environ Health 216(2):115–125

Shekhawat SS, Ghosh I (2011) Split-protein systems: beyond binary protein–protein interactions. Curr Opin Chem Biol 15(6):789–797

Tannous BA, Kim DE, Fernandez JL, Weissleder R, Breakefield XO (2005) Codon-optimized Gaussia luciferase cDNA for mammalian gene expression in culture and in vivo. Mol Therapy J Am Soc Gene Therapy 11(3):435–443

Tiffen JC, Bailey CG, Ng C, Rasko JEJ, Holst J (2010) Luciferase expression and bioluminescence does not affect tumor cell growth in vitro or in vivo. Mol Cancer 9:299

Wainwright PC, Longo SJ (2017) Functional innovations and the conquest of the oceans by acanthomorph fishes. Curr Biol 27(11):R550–R557

Watanabe T, Enomoto T, Takahashi M, Honma S, Honma KI, Ohmiya Y (2010) Multichannel perfusion culture bioluminescence reporter system for long-term detection in living cells. Anal Biochem 402(1):107–109

Widder EA (2010) Bioluminescence in the ocean: origins of biological, chemical, and ecological diversity. Science 328(5979):704–708

Wu C, Kawasaki K, Ogawa Y, Yoshida Y, Ohgiya S, Ohmiya Y (2007) Preparation of biotinylated cypridina luciferase and its use in bioluminescent enzyme immunoassay. Anal Chem 79(4):1634–1638

Wu C, Irie S, Yamamoto S, Ohmiya Y (2009) A Bioluminescent enzyme immunoassay for prostaglandin E(2) using cypridina luciferase. Lumin J Biol Chem Lumin 24(2):131–133

Yamada Y, Nishide SY, Nakajima Y, Watanabe T, Ohmiya Y, Honma KI, Honma S (2013) Monitoring Circadian time in rat plasma using a secreted cypridina luciferase reporter. Anal Biochem 439(2):80–87

Zammatteo N, Moris P, Alexandre I, Vaira D, Piette J, Remacle J (1995) DNA Probe hybridisation in microwells using a new bioluminescent system for the detection of PCR-amplified HIV-1 proviral DNA. J Virol Methods 55(2):185–197