DNA transport by a type II DNA topoisomerase: Evidence in favor of a two-gate mechanism
Tài liệu tham khảo
Barzilai, 1973, SV40 DNA: Quantitative conversion of closed circular to open circular form by an ethidium bromide-restricted endonuclease, J. Mol. Biol., 74, 739, 10.1016/0022-2836(73)90062-4
Caron, 1994, Alignment of primary sequences of DNA topoisomerases
Gellert, 1977, Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity, 74, 4772
Horowitz, 1987, Mapping the active site tyrosine of Escherichia coli DNA gyrase, J. Biol. Chem., 262, 5339, 10.1016/S0021-9258(18)61193-7
Hsieh, 1990, Mechanistic aspects of type-II DNA topoisomerases, 243
Kirchhausen, 1985, DNA gyrase and its complexes with DNA: direct observation by electron microscopy, Cell, 41, 933, 10.1016/S0092-8674(85)80074-X
Krasnow, 1983, Site-specific relaxation and recombination by the Tn3 resolvase: recognition of the DNA path between oriented res sites, Cell, 32, 1313, 10.1016/0092-8674(83)90312-4
Lee, 1981, Unwinding of double-stranded DNA helix by dehydration, 78, 2838
Lindsley, 1993, Study of allosteric communication between protomers by immunotagging, Nature, 361, 749, 10.1038/361749a0
Lindsley, 1993, On the coupling between ATP usage and DNA transport by yeast DNA topoisomerase II, J. Biol. Chem., 268, 1645, 10.1016/S0021-9258(18)53067-2
Liu, 1983, Cleavage of DNA by mammalian DNA topoisomerase II, J. Biol. Chem., 258, 15365, 10.1016/S0021-9258(17)43815-4
Maxwell, 1986, Mechanistic aspects of DNA topoisomerases, Adv. Prot. Chem., 38, 69, 10.1016/S0065-3233(08)60526-4
Mizuuchi, 1980, DNA gyrase action involves the introduction of transient double-stranded breaks into DNA, 77, 1847
Morrison, 1979, Site-specific cleavage of DNA by E. coli gyrase, Cell, 17, 175, 10.1016/0092-8674(79)90305-2
Morrison, 1980, Mechanisms of DNA topoisomerases, 785
Pommier, 1989, Topological complexes between DNA and topoisomerase II and effects of polyamines, Biochemistry, 28, 1002, 10.1021/bi00429a012
Radloff, 1967, A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells, 57, 1514
Reece, 1991, DNA gyrase: structure and function, Crit. Rev. Biochem. Mol. Biol., 26, 335, 10.3109/10409239109114072
Roca, 1992, The capture of a DNA double helix by an ATP-dependent protein clamp: a key step in DNA transport by type II DNA topoisomerases, Cell, 71, 833, 10.1016/0092-8674(92)90558-T
Roca, 1993, On the simultaneous binding of eukaryotic DNA topoisomerase II to a pair of double-stranded DNA helices, J. Biol. Chem., 268, 14250, 10.1016/S0021-9258(19)85234-1
Roca, 1994, Antitumor bisdioxopiperazines inhibit yeast DNA topoisomerase II by trapping the enzyme in the form of a closed protein clamp, 91, 1781
Rowe, 1984, Identification of the breakage-reunion subunit of T4 DNA topoisomerase, J. Biol. Chem., 259, 9177, 10.1016/S0021-9258(17)47281-4
Sander, 1983, Double strand DNA cleavage by type II DNA topoisomerase from Drosophila melanogaster, J. Biol. Chem., 258, 8421, 10.1016/S0021-9258(20)82081-X
Sugino, 1977, Mechanism of action of nalidixic acid: purification of E. coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme, 74, 4767
Sugino, 1978, Energy coupling in DNA gyrase and the mechanism of action of novobiocin, 75, 4838
Thomas, 1979, The separation of DNA segments attached to proteins, Anal. Biochem., 93, 158, 10.1016/S0003-2697(79)80130-X
Tse, 1980, Covalent bonds between protein and DNA: formation of phosphotyrosine linkage between certain DNA topoisomerases and DNA, J. Biol. Chem., 255, 5560, 10.1016/S0021-9258(19)70666-8
Vologodskii, 1992, Conformational and thermodynamic properties of supercoiled DNA, J. Mol. Biol., 227, 1224, 10.1016/0022-2836(92)90533-P
Wang, 1970, Interlocked DNA rings: physicochemical studies, Biopolymers, 9, 489, 10.1002/bip.1970.360090410
Wang, 1985, DNA topoisomerases, Annu. Rev Biochem., 54, 665, 10.1146/annurev.bi.54.070185.003313
Wang, 1991, DNA topoisomerases: why so many?, J. Biol. Chem., 266, 6659, 10.1016/S0021-9258(20)89545-3
Wang, 1980, DNA topoisomerases, 769
Wang, 1983, DNA supercoiling and its effects on DNA structure and function, 47, 85
Wigley, 1991, Crystal structure of the N-terminal fragment of the DNA gyrase B protein, Nature, 351, 624, 10.1038/351624a0
Worland, 1989, Inducible overexpression, purification, and active site mapping of DNA topoisomerase II from the yeast Saccharomyces cerevisiae, J. Biol. Chem., 264, 4412, 10.1016/S0021-9258(18)83757-7
Zechiedrich, 1990, Eukaryotic topoisomerases recognize nucleic acid topology by preferentially interacting with DNA crossovers, EMBO J., 9, 4555, 10.1002/j.1460-2075.1990.tb07908.x