SRST2: Rapid genomic surveillance for public health and hospital microbiology labs Tập 6 Số 11
Michael Inouye, Harriet Dashnow, Lesley-Ann Raven, Mark B. Schultz, Bernard J. Pope, Takehiro Tomita, Justin Zobel, Kathryn E. Holt
AbstractRapid molecular typing of bacterial pathogens is critical for public health epidemiology, surveillance and infection control, yet routine use of whole genome sequencing (WGS) for these purposes poses significant challenges. Here we present SRST2, a read mapping-based tool for fast and accurate detection of genes, alleles and multi-locus sequence types (MLST...... hiện toàn bộ Making sense of big data in health research: Towards an EU action plan Tập 8 Số 1 - 2016
Charles Auffray, Rudi Balling, Inês Barroso, László Bencze, Mikael Benson, Jay Bergeron, Enrique Bernal‐Delgado, Niklas Blomberg, Christoph Bock, Ana Conesa, Susanna Del Signore, Christophe Delogne, Peter Devilee, Alberto Di Meglio, Marinus J.C. Eijkemans, Paul Flicek, Norbert Graf, Vera Grimm, Henk‐Jan Guchelaar, Yanling Guo, Marta Gut, Allan Hanbury, Shahid Hanif, R.-D Hilgers, Ángel Honrado, David R. J. Hose, Jeanine J. Houwing‐Duistermaat, Tim Hubbard, Sophie H. Janacek, Haralampos Karanikas, Tim Kievits, Manfred Köhler, Andreas Kremer, Jerry Lanfear, Thomas Lengauer, Edith Maes, Theo Meert, Gordon Dougan, Dörthe Nickel, Peter Oledzki, Bertrand Pedersen, Milan Petković, Konstantinos Pliakos, Magnus Rattray, Josep Redón, Reinhard Schneider, Thierry Sengstag, Xavier Serra‐Picamal, Wouter Spek, Lea Vaas, Okker van Batenburg, Marc Vandelaer, Péter Várnai, Pablo Villoslada, Juan Antonio Vizcaíno, John Peter Mary Wubbe, Gianluigi Zanetti
Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes - 2016
Moran Yassour, Mi Young Lim, Hyun Sun Yun, Timothy L. Tickle, Joohon Sung, Yun Mi Song, Kayoung Lee, Eric A. Franzosa, Xochitl C. Morgan, Dirk Gevers, Eric S. Lander, Ramnik J. Xavier, Bruce W. Birren, Gwang Pyo Ko, Curtis Huttenhower