Journal of the Royal Statistical Society. Series A: Statistics in Society
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From individual level longitudinal data for two entire cohorts of medical students in UK universities, we use multilevel models to analyse the probability that an individual student will drop out of medical school. We find that academic preparedness—both in terms of previous subjects studied and levels of attainment therein—is the major influence on withdrawal by medical students. Additionally, males and more mature students are more likely to withdraw than females or younger students respectively. We find evidence that the factors influencing the decision to transfer course differ from those affecting the decision to drop out for other reasons.
We discuss prediction of random effects and of expected responses in multilevel generalized linear models. Prediction of random effects is useful for instance in small area estimation and disease mapping, effectiveness studies and model diagnostics. Prediction of expected responses is useful for planning, model interpretation and diagnostics. For prediction of random effects, we concentrate on empirical Bayes prediction and discuss three different kinds of standard errors; the posterior standard deviation and the marginal prediction error standard deviation (comparative standard errors) and the marginal sampling standard deviation (diagnostic standard error). Analytical expressions are available only for linear models and are provided in an appendix. For other multilevel generalized linear models we present approximations and suggest using parametric bootstrapping to obtain standard errors. We also discuss prediction of expectations of responses or probabilities for a new unit in a hypothetical cluster, or in a new (randomly sampled) cluster or in an existing cluster. The methods are implemented in gllamm and illustrated by applying them to survey data on reading proficiency of children nested in schools. Simulations are used to assess the performance of various predictions and associated standard errors for logistic random-intercept models under a range of conditions.
Joint modelling of longitudinal data and competing risks has grown over the past decade. Despite the recent methodological developments, there are still limited options for fitting these models in standard statistical software programs, which prohibits their adoption by applied biostatisticians. We summarize four published models, each of which has software available for model estimation. Each model features a different hazard function, latent association structure between the submodels, estimation approach and software implementation. Of the four models considered here, the model specifications and association structures are substantially different, thus complicating model-to-model comparison. The models are applied to the ‘Standard and new anti-epileptic drugs’ trial of anti-epileptic drugs to investigate the effect of drug titration on the treatment effects of lamotrigine and carbamazepine on the mode of treatment failure. Notwithstanding the vastly different association structures, we show that the inference from each model is consistent, namely, that there is a beneficial effect of lamotrigine on unacceptable adverse events over carbamazepine and a non-significant effect on the hazard of inadequate seizure control. The association between anti-epileptic drug titration and treatment failure was significant in most models. To allow for the routine adoption of joint modelling of competing risks and longitudinal data in the analysis of clinical data sets, further work is required on the development of model diagnostics to aid model choice.
Meta-analysis in the presence of unexplained heterogeneity is frequently undertaken by using a random-effects model, in which the effects underlying different studies are assumed to be drawn from a normal distribution. Here we discuss the justification and interpretation of such models, by addressing in turn the aims of estimation, prediction and hypothesis testing. A particular issue that we consider is the distinction between inference on the mean of the random-effects distribution and inference on the whole distribution. We suggest that random-effects meta-analyses as currently conducted often fail to provide the key results, and we investigate the extent to which distribution-free, classical and Bayesian approaches can provide satisfactory methods. We conclude that the Bayesian approach has the advantage of naturally allowing for full uncertainty, especially for prediction. However, it is not without problems, including computational intensity and sensitivity to a priori judgements. We propose a simple prediction interval for classical meta-analysis and offer extensions to standard practice of Bayesian meta-analysis, making use of an example of studies of ‘set shifting’ ability in people with eating disorders.
Square contingency tables with matching ordinal rows and columns arise in particular as empirical transition matrices and the paper considers these in the context of social class and income mobility tables. Such tables relate the socio-economic position of parents to the socio-economic position of their child in adulthood. The level of association between parental and child socio-economic position is taken as a measure of mobility. Several approaches to analysis are described and illustrated by UK data in which interest focuses on comparisons of social class and income mobility tables that are derived from the same individuals. Account is taken of the use of the same individuals in the two tables. Additionally comparisons over time are considered.
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