Vaccinia virus transcription

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Beaud, 1995, Vaccinia virus gene H5R encodes a protein that is phosphorylated by the multisubunit vaccinia virus B1R protein kinase, J Virol, 69, 1819, 10.1128/JVI.69.3.1819-1826.1995

Bertholet, 1987, Vaccinia virus produces late mRNAs by discontinuous synthesis, Cell, 50, 153, 10.1016/0092-8674(87)90211-X

Black, 1996, Phenotypic characterization of mutants in vaccinia virus gene G2R, a putative transcription elongation factor, J Virol, 70, 47, 10.1128/JVI.70.1.47-54.1996

Black, 1998, Characterization of the interactions among vaccinia virus transcription factors G2R, A18R, and H5R, Virology, 245, 313, 10.1006/viro.1998.9166

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Broyles, 1993, Vaccinia virus encodes a functional dUTPase, Virology, 195, 863, 10.1006/viro.1993.1446

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Broyles, 1987, Sedimentation of an RNA polymerase complex from vaccinia virus that specifically initiates and terminates transcription, Mol Cell Biol, 7, 7, 10.1128/MCB.7.1.7

Broyles, 1988, DNA-dependent ATPase activity associated with vaccinia virus early transcription factor, J Biol Chem, 263, 10761, 10.1016/S0021-9258(18)38036-0

Broyles, 1990, Vaccinia virus gene encoding a component of the viral early transcription factor, J Virol, 64, 1523, 10.1128/JVI.64.4.1523-1529.1990

Broyles, 1990, Vaccinia virus gene encoding a 30-kilodalton subunit of the viral DNA-dependent RNA polymerase, J Virol, 64, 5376, 10.1128/JVI.64.11.5376-5382.1990

Broyles, 1988, Purification of a factor required for transcription of vaccinia virus early genes, J Biol Chem, 263, 10754, 10.1016/S0021-9258(18)38035-9

Broyles, 1991, Promoter DNA contacts made by the vaccinia virus early transcription factor, J Biol Chem, 263, 15539, 10.1016/S0021-9258(18)98650-3

Broyles, 1999, Transcription factor YY1 is a vaccinia virus late promoter activator, J Biol Chem, 274, 35662, 10.1074/jbc.274.50.35662

Cassetti, 1996, Interaction of the 82-kDa subunit of the vaccinia virus early transcription factor heterodimer with the promoter core sequence directs downstream DNA binding of the 70-kDa subunit, Proc Natl Acad Sci U S A, 93, 7540, 10.1073/pnas.93.15.7540

Cassetti, 1998, DNA packaging mutant: repression of the vaccinia virus A32 gene results in noninfectious, DNA-deficient, spherical, enveloped particles, J Virol, 72, 5769, 10.1128/JVI.72.7.5769-5780.1998

Christen, 1998, Vaccinia virus nucleoside triphosphate phosphohydrolase I is an essential viral early gene transcription termination factor, Virology, 245, 360, 10.1006/viro.1998.9177

Conaway, 1999, Transcription elongation and human disease, Annu Rev Biochem, 68, 301, 10.1146/annurev.biochem.68.1.301

Condit, 1981, Isolation and preliminary characterization of temperature-sensitive mutants of vaccinia virus, Virology, 113, 224, 10.1016/0042-6822(81)90150-1

Condit, 2002, Regulation of viral transcription elongation and termination during vaccinia virus infection, Biochim Biophys Acta, 1577, 325, 10.1016/S0167-4781(02)00461-X

Condit, 1983, Isolation, characterization, and physical mapping of temperature-sensitive mutants of vaccinia virus, Virology, 128, 429, 10.1016/0042-6822(83)90268-4

Condit, 1996, Mutation of vaccinia virus gene G2R causes suppression of gene A18R ts mutants: implications for control of transcription, Virology, 220, 10, 10.1006/viro.1996.0280

Davis, 2002, Structure of the yeast RNA polymerase II holoenzyme: mediator conformation and polymerase interaction, Mol Cell, 10, 409, 10.1016/S1097-2765(02)00598-1

Davison, 1989a, Structure of vaccinia virus late promoters, J Mol Biol, 210, 771, 10.1016/0022-2836(89)90108-3

Davison, 1989b, Structure of vaccinia virus early promoters, J Mol Biol, 210, 749, 10.1016/0022-2836(89)90107-1

Deng, 1994, A role for the H4 subunit of vaccinia RNA polymerase in transcription initiation at a viral early promoter, J Biol Chem, 269, 14323, 10.1016/S0021-9258(17)36792-3

Deng, 1997, Elongation properties of vaccinia virus RNA polymerase: pausing, slippage, 3′ end addition, and termination site choice, Biochemistry, 36, 15892, 10.1021/bi972037a

Deng, 1998, Vaccinia NPH-I, a DExH-box ATPase, is the energy coupling factor for mRNA transcription termination, Genes Dev, 12, 538, 10.1101/gad.12.4.538

Garces, 1993, Reactivation of transcription from a vaccinia virus early promoter late in infection, J Virol, 67, 5394, 10.1128/JVI.67.9.5394-5401.1993

Gershon, 1990, Early transcription factor subunits are encoded by vaccinia virus late genes, Proc Natl Acad Sci U S A, 87, 4401, 10.1073/pnas.87.11.4401

Gershon, 1991, Poly(A) polymerase and a dissociable polyadenylation stimulatory factor encoded by vaccinia virus, Cell, 66, 1269, 10.1016/0092-8674(91)90048-4

Gershowitz, 1978, Multiple roles for ATP in the synthesis and processing of mRNA by vaccinia virus: specific inhibitory effects of adenosine ( β , γ -imido)triphosphate, J Virol, 27, 399, 10.1128/JVI.27.2.399-408.1978

Gnatt, 2002, Elongation by RNA polymerase II: structure-function relationship, Biochim Biophys Acta, 1577, 175, 10.1016/S0167-4781(02)00451-7

Gunasinghe, 1998, A vaccinia virus late transcription factor with biochemical and molecular identity to a human cellular protein, J Biol Chem, 273, 27524, 10.1074/jbc.273.42.27524

Hagler, 1992, Structural analysis of ternary complexes of vaccinia RNA polymerase, Proc Natl Acad Sci U S A, 89, 10099, 10.1073/pnas.89.21.10099

Harris, 1993, Transcription initiation factor activity of vaccinia virus capping enzyme is independent of mRNA guanylylation, Proc Natl Acad Sci U S A, 90, 2860, 10.1073/pnas.90.7.2860

Hooda-Dhingra, 1989, Detailed phenotypic characterization of five temperature-sensitive mutants in the 22- and 147-kilodalton subunits of vaccinia virus DNA-dependent RNA polymerase, J Virol, 63, 714, 10.1128/JVI.63.2.714-729.1989

Houbaviy, 1996, Cocrystal structure of YY1 bound to the adeno-associated virus P5 initiator, Proc Natl Acad Sci U S A, 93, 13577, 10.1073/pnas.93.24.13577

Howard, 1999, A 43-nucleotide RNA cis -acting element governs the site-specific formation of the 3′ end of a poxvirus late mRNA, Virology, 255, 190, 10.1006/viro.1998.9547

Hruby, 1982, Mapping and identification of the vaccinia virus thymidine kinase gene, J Virol, 43, 403, 10.1128/JVI.43.2.403-409.1982

Hu, 1996, De novo synthesis of the early transcription factor 70-kilodalton subunit is required for morphogenesis of vaccinia virions, J Virol, 70, 7669, 10.1128/JVI.70.11.7669-7677.1996

Hu, 1998, Repression of the A8L gene, encoding the early transcription factor 82-kilodalton subunit, inhibits morphogenesis of vaccinia virions, J Virol, 72, 104, 10.1128/JVI.72.1.104-112.1998

Jones, 1984, Mapping of the vaccinia virus DNA polymerase gene by marker rescue and cell-free translation of selected RNA, J Virol, 49, 72, 10.1128/JVI.49.1.72-77.1984

Jones, 1987, DNA-dependent RNA polymerase subunits encoded within the vaccinia virus genome, J Virol, 61, 1765, 10.1128/JVI.61.6.1765-1771.1987

Kates, 1967, Poxvirus DNA-dependent RNA polymerase, Proc Natl Acad Sci U S A, 58, 134, 10.1073/pnas.58.1.134

Keck, 1990, Role of DNA replication in vaccinia virus gene expression: a naked template is required for transcription of three late trans -activator genes, Cell, 61, 801, 10.1016/0092-8674(90)90190-P

Kotwal, 1989, Mapping and insertional mutagenesis of a vaccinia virus gene encoding a 13,800-Da secreted protein, Virology, 171, 579, 10.1016/0042-6822(89)90627-2

Kovacs, 1996, The vaccinia virus H5R gene encodes late gene transcription factor 4: purification, cloning, and overexpression, J Virol, 70, 6796, 10.1128/JVI.70.10.6796-6802.1996

Kovacs, 1994, Modification of the cascade model for regulation of vaccinia virus gene expression: purification of a prereplicative, late-stage-specific transcription factor, J Virol, 68, 3443, 10.1128/JVI.68.5.3443-3447.1994

Kovacs, 2001, Regulation of viral intermediate gene expression by the vaccinia virus B1 protein kinase, J Virol, 75, 4048, 10.1128/JVI.75.9.4048-4055.2001

Kumar, 1990, Activity of a fowlpox virus late gene promoter in vaccinia and fowlpox virus recombinants, Arch Virol, 112, 139, 10.1007/BF01323160

Lackner, 2000, Vaccinia virus gene A18R DNA helicase is a transcript release factor, J Biol Chem, 275, 1485, 10.1074/jbc.275.2.1485

Latner, 2000, The vaccinia virus bifunctional gene J3 (nucleoside-2′- O -)-methyltransferase and poly(A) polymerase stimulatory factor is implicated as a positive transcription elongation factor by two genetic approaches, Virology, 269, 345, 10.1006/viro.2000.0243

Latner, 2002, The positive transcription elongation factor activity of the vaccinia virus J3 protein is independent from its (nucleoside-2′- O -) methyltransferase and poly(A) polymerase stimulatory functions, Virology, 301, 64, 10.1006/viro.2002.1538

Lee-Chen, 1988, Transcription and translation mapping of the 13 genes in the vaccinia virus Hin dIII D fragment, Virology, 163, 52, 10.1016/0042-6822(88)90233-4

Li, 1993, Recruitment of vaccinia virus RNA polymerase to an early gene promoter by the viral early transcription factor, J Biol Chem, 268, 2773, 10.1016/S0021-9258(18)53841-2

Li, 1995, The DNA binding domain of the vaccinia virus early gene transcription factor small subunit is an extended helicase-like motif, Nucleic Acids Res, 23, 1590, 10.1093/nar/23.9.1590

Li, 1994, Temperature-sensitive mutations in the gene encoding the small subunit of the vaccinia virus early transcription factor impair promoter binding, transcription activation, and packaging of multiple virion components, J Virol, 68, 2605, 10.1128/JVI.68.4.2605-2614.1994

Lin, 1992, The vaccinia virus B1R gene product is a serine/threonine protein kinase, J Virol, 66, 2717, 10.1128/JVI.66.5.2717-2723.1992

McCraith, 2000, Genome-wide analysis of vaccinia virus protein–protein interactions, Proc Natl Acad Sci U S A, 97, 4879, 10.1073/pnas.080078197

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Minnigan, 1985, Intracellular location of rabbit poxvirus nucleic acid within infected cells as determined by in situ hybridization, J Virol, 55, 634, 10.1128/JVI.55.3.634-643.1985

Mohamed, 2000, Interaction between nucleoside triphosphate phosphohydrolase I and the H4L subunit of the viral RNA polymerase is required for vaccinia virus early gene transcript release, J Biol Chem, 275, 25798, 10.1074/jbc.M002250200

Mohamed, 2001, The viral RNA polymerase H4L subunit is required for vaccinia virus early gene transcription termination, J Biol Chem, 276, 20758, 10.1074/jbc.M101641200

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Morgan, 1984, Identification of the DNA sequences encoding the large subunit of the mRNA-capping enzyme of vaccinia virus, J Virol, 52, 206, 10.1128/JVI.52.1.206-214.1984

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