Transcriptomic response of wolf spider, Pardosa pseudoannulata, to transgenic rice expressing Bacillus thuringiensis Cry1Ab protein
Tóm tắt
Từ khóa
Tài liệu tham khảo
Bawa AS, Anilakumar KR. Genetically modified foods: safety, risks and public concerns-a review. J Food Sci Technol. 2013;50(6):1035–46.
Kamle S, Ali S. Genetically modified crops: Detection strategies and biosafety issues. Gene. 2013;522(2):123–32.
Brookes G, Barfoot P. Environmental impacts of genetically modified (GM) crop use 1996-2013: Impacts on pesticide use and carbon emissions. GM Crops Food. 2015;6(2):103–33.
Klumper W, Qaim M. A meta-analysis of the impacts of genetically modified crops. PLoS One. 2014;9(11):e111629.
Wu K. Suppression of cotton bollworm in multiple crops in China in areas with Bt toxin-containing cotton. Science. 2009;321(5896):1676–8.
Li Y, Peng Y, Hallerman EM, Wu K. Biosafety management and commercial use of genetically modified crops in China. Plant Cell Rep. 2014;33(4):565–73.
Han F, Zhou D, Liu X, Cheng J, Zhang Q, Shelton AM. Attitudes in China about crops and foods developed by biotechnology. PLoS One. 2015;10(9):e0139114.
Bai YY, Yan RH, Ye GY, Huang F, Wangila DS, Wang JJ, Cheng JA. Field response of aboveground non-target arthropod community to transgenic Bt-Cry1Ab rice plant residues in postharvest seasons. Transgenic Res. 2012;21(5):1023–32.
Lu ZB, Tian JC, Han NS, Hu C, Peng YF, Stanley D, Ye GY. No direct effects of two transgenic Bt rice lines, T1C-19 and T2A-1, on the arthropod communities. Environ Entomol. 2014;43(5):1453–63.
Lu ZB, Liu YE, Han NS, Tian JC, Peng YF, Hu C, Guo YY, Ye GY. Transgenic cry1C or cry2A rice has no adverse impacts on the life-table parameters and population dynamics of the brown planthopper, Nilaparvata lugens (Hemiptera: Delphacidae). Pest Manag Sci. 2015;71(7):937–45.
Qiang FU, Wang F, Dong LI, Yao Q, Lai F, Zhang Z. Effects of insect-resistant transgenic rice lines MSA and MSB on non-target pests Nilaparvata lugens and Sogatella fucifera. Acta Entomol Sin. 2003;46(6):697–704.
Bai YY, Jiang MX, Cheng JA, Wang D. Effects of Cry1Ab Toxin on Propylea japonica (Thunberg) (Coleoptera: Coccinellidae) through its prey, Nilaparvata lugens Stål (Homoptera: Delphacidae), feeding on transgenic Bt rice. Environ Entomol. 2006;35(4):1130–6.
Chen M, Liu ZC, Ye GY, Shen ZC, Hu C, Peng YF, Altosaar I, Shelton AM. Impacts of transgenic cry1Ab rice on non-target planthoppers and their main predator Cyrtorhinus lividipennis (Hemiptera: Miridae)-A case study of the compatibility of Bt rice with biological control. Biol Control. 2007;42(2):242–50.
Li Y, Chen X, Hu L, Romeis J, Peng Y. Bt rice producing Cry1C protein does not have direct detrimental effects on the green lacewing Chrysoperla sinica (Tjeder). Toxicol Environ Chem. 2014;33(6):1391–7.
Li Y, Wang Y, Romeis J, Liu Q, Lin K, Chen X, Peng Y. Bt rice expressing Cry2Aa does not cause direct detrimental effects on larvae of Chrysoperla sinica. Ecotoxicology. 2013;22(9):1413–21.
Chen M, Ye GY, Liu ZC, Qi F, Cui H, Peng YF, Shelton AM. Analysis of Cry1Ab toxin bioaccumulation in a food chain of Bt rice, an herbivore and a predator. Ecotoxicology. 2009;18(2):230–8.
Yuan Y, Ke X, Chen F, Krogh PH, Ge F. Decrease in catalase activity of Folsomia candida fed a Bt rice diet. Environ Pollut. 2011;159(12):3714–20.
Stotzky G. Persistence and biological activity in soil of the insecticidal proteins from Bacillus thuringiensis, especially from transgenic plants. Plant Soil. 2004;266(1-2):77–89.
Koskella J, Stotzky G. Microbial utilization of free and clay-bound insecticidal toxins from bacillus thuringiensis and their retention of insecticidal activity after incubation with microbes. Appl Environ Microbiol. 1997;63(9):3561–8.
Li Y, Hallerman EM, Liu Q, Wu K, Peng Y. The development and status of Bt rice in China. Plant Biotechnol J. 2016;14(3):839–48.
Zhang G, Zhang W, Gu D. The structure and dynamics of main arthropod predator community in paddy field. Suppl J Sun Yasten Univer. 1995;2:33–40.
Tian YX, Zhou Y, Xiao K, Wang Z, Chen JJ, Lu XY, Song QS. Effect of Cry1Ab protein on hemocytes of the wolf spider Pardosa pseudoannulata. Biocontrol Sci Technol. 2013;23(4):423–32.
Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q. Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol. 2011;29(7):644–52.
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics. 2005;21(18):3674–6.
Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R, Bolund L, et al. WEGO: a web tool for plotting GO annotations. Nucleic Acids Res. 2006;34(Web Server issue):W293–7.
Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 2000;28(1):27–30.
Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov SL, Nikolskaya AN, et al. The COG database: an updated version includes eukaryotes. BMC Bioinformatics. 2003;4:41.
Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol. 2010;28(5):511–5.
Wang L, Feng Z, Wang X, Wang X, Zhang X. DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. Bioinformatics (Oxford, England). 2010;26(1):136–8.
Andreas U, Ioana C, Triinu K, Jian Y, Faircloth BC, et al. Primer3--new capabilities and interfaces. Nucleic Acids Res. 2012;40(15):e115.
Gene Ontology C. The Gene Ontology project in 2008. Nucleic Acids Res. 2008;36(Database issue):D440–4.
Rivals I, Personnaz L, Taing L, Potier MC. Enrichment or depletion of a GO category within a class of genes: which test. Bioinformatics (Oxford, England). 2007;23(4):401–7.
Wang J, Peng YD, He C, et al. Cry1Ab-expressing rice did not influence expression of fecundity-related genes in the wolf spider Pardosa pseudoannulata. Gene. 2016;592(1):1–7.
De Schrijver A, Devos Y, De Clercq P, Gathmann A, Romeis J. Quality of laboratory studies assessing effects of Bt-proteins on non-target organisms: minimal criteria for acceptability. Transgenic Res. 2016;25(4):1–17.
Tian JC, Liu ZC, Chen M, Chen Y, Chen XX, Peng YF, Hu C, Ye GY. Laboratory and field assessments of prey-mediated effects of transgenic Bt rice on Ummeliata insecticeps (Araneida: Linyphiidae). Environ Entomol. 2010;39(4):1369–77.
Gnatzy W, Romer F. Cuticle: Formation, moulting and control. In: Bereiter-Hahn J, Matoltsy AG, Richards KS, editors. Biology of Integument. Berlin Heidelberg: Springer-Verlag; 1984. p. 638–84.
Al-Sawalmih A, Li C, Siegel S, Fabritius H, Yi S, Raabe D, Fratzl P, Paris O. Microtexture and chitin/calcite orientation relationship in the mineralized exoskeleton of the american lobster. Adv Funct Mater. 2008;18(20):3307–14.
Foelix R. Biology of spiders. In. Cambridge, Massachusetts, and London, Engand: Harvard University Press; 1982.
Meng X, Zhang Y, Bao H, Liu Z. Sequence analysis of insecticide action and detoxification-related genes in theinsect pest natural enemy Pardosa pseudoannulata. PLoS One. 2015;10(4):e0125242.