Structural insights into the light-driven auto-assembly process of the water-oxidizing Mn4CaO5-cluster in photosystem II
Tóm tắt
Từ khóa
Tài liệu tham khảo
Afonine, 2012, Towards automated crystallographic structure refinement with phenix.refine, Acta Crystallographica Section D Biological Crystallography, 68, 352, 10.1107/S0907444912001308
Allakhverdiev, 2011, Redox potentials of primary electron acceptor quinone molecule (QA)- and conserved energetics of photosystem II in cyanobacteria with chlorophyll a and chlorophyll d, PNAS, 108, 8054, 10.1073/pnas.1100173108
Ananyev, 1997, Calcium induces binding and formation of a spin-coupled dimanganese(II,II) center in the apo-water oxidation complex of photosystem II as precursor to the functional tetra-Mn/Ca cluster, Biochemistry, 36, 11342, 10.1021/bi970626a
Asada, 2015, Location of the High-Affinity mn(2+) Site in Photosystem II detected by PELDOR, The Journal of Physical Chemistry B, 119, 10139, 10.1021/acs.jpcb.5b03994
Bao, 2016, Photoactivation: the light-driven assembly of the water oxidation complex of Photosystem II, Frontiers in Plant Science, 7, 578, 10.3389/fpls.2016.00578
Barber, 2009, Photosynthetic energy conversion: natural and artificial, Chemical Society Reviews, 38, 185, 10.1039/B802262N
Barra, 2006, Intermediates in assembly by photoactivation after thermally accelerated disassembly of the manganese complex of photosynthetic water oxidation, Biochemistry, 45, 14523, 10.1021/bi061842z
Becker, 2011, Assembly of the water-oxidizing complex in photosystem II, Journal of Photochemistry and Photobiology B: Biology, 104, 204, 10.1016/j.jphotobiol.2011.02.005
Boekema, 2000, Conformational changes in photosystem II supercomplexes upon removal of extrinsic subunits, Biochemistry, 39, 12907, 10.1021/bi0009183
Bricker, 2012, The extrinsic proteins of Photosystem II, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1817, 121, 10.1016/j.bbabio.2011.07.006
Brinkert, 2016, Bicarbonate-induced redox tuning in Photosystem II for regulation and protection, PNAS, 113, 12144, 10.1073/pnas.1608862113
Chen, 1995, Calcium modulates the photoassembly of photosystem II (Mn)4-clusters by preventing ligation of nonfunctional high-valency states of manganese, Biochemistry, 34, 13511, 10.1021/bi00041a031
Chen, 2010, MolProbity: all-atom structure validation for macromolecular crystallography, Acta Crystallographica Section D Biological Crystallography, 66, 12, 10.1107/S0907444909042073
Cheniae, 1971, Photoactivation of the manganese catalyst of O2 evolution. I. Biochemical and kinetic aspects, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 253, 167, 10.1016/0005-2728(71)90242-8
Cox, 2013, Reflections on substrate water and dioxygen formation, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1827, 1020, 10.1016/j.bbabio.2013.01.013
Dasgupta, 2008, Photoassembly of the Water-Oxidizing complex in Photosystem II, Coordination Chemistry Reviews, 252, 347, 10.1016/j.ccr.2007.08.022
Dau, 2012, Recent developments in research on water oxidation by photosystem II, Current Opinion in Chemical Biology, 16, 3, 10.1016/j.cbpa.2012.02.011
Diederichs, 1997, Improved R-factors for diffraction data analysis in macromolecular crystallography, Nature Structural Biology, 4, 269, 10.1038/nsb0497-269
Emsley, 2010, Features and development of coot, Acta Crystallographica Section D Biological Crystallography, 66, 486, 10.1107/S0907444910007493
Ferreira, 2004, Architecture of the photosynthetic oxygen-evolving center, Science, 303, 1831, 10.1126/science.1093087
Griese, 2014, Assembly of nonheme mn/Fe active sites in heterodinuclear metalloproteins, JBIC Journal of Biological Inorganic Chemistry, 19, 759, 10.1007/s00775-014-1140-7
Guskov, 2009, Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride, Nature Structural & Molecular Biology, 16, 334, 10.1038/nsmb.1559
Heinz, 2016, Analysis of photosystem II biogenesis in cyanobacteria, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1857, 274, 10.1016/j.bbabio.2015.11.007
Hellmich, 2014, Native-like photosystem II superstructure at 2.44 å resolution through detergent extraction from the protein crystal, Structure, 22, 1607, 10.1016/j.str.2014.09.007
Järvi, 2015, Photosystem II repair in plant chloroplasts--regulation, assisting proteins and shared components with photosystem II biogenesis, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1847, 900, 10.1016/j.bbabio.2015.01.006
Karplus, 2012, Linking crystallographic model and data quality, Science, 336, 1030, 10.1126/science.1218231
Kern, 2005, Purification, characterisation and crystallisation of photosystem II from Thermosynechococcus elongatus cultivated in a new type of photobioreactor, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1706, 147, 10.1016/j.bbabio.2004.10.007
Komenda, 2010, Role of FtsH2 in the repair of Photosystem II in mutants of the Cyanobacterium synechocystis PCC 6803 with impaired assembly or stability of the CaMn(4) cluster, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1797, 566, 10.1016/j.bbabio.2010.02.006
Krieger, 1997, Comparison of chloride-depleted and calcium-depleted PSII: the midpoint potential of QA and susceptibility to photodamage, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1319, 91, 10.1016/S0005-2728(96)00117-X
Krivanek, 2007, Spare quinones in the QB cavity of crystallized photosystem II from thermosynechococcus elongatus, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1767, 520, 10.1016/j.bbabio.2007.02.013
Krug, 2012, XDSAPP : a graphical user interface for the convenient processing of diffraction data using XDS, Journal of Applied Crystallography, 45, 568, 10.1107/S0021889812011715
Laemmli, 1970, Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, 227, 680, 10.1038/227680a0
Loll, 2005, Towards complete cofactor arrangement in the 3.0 A resolution structure of photosystem II, Nature, 438, 1040, 10.1038/nature04224
McEvoy, 2006, Water-splitting chemistry of photosystem II, Chemical Reviews, 106, 4455, 10.1021/cr0204294
Mueller, 2012, Facilities for macromolecular crystallography at the Helmholtz-Zentrum Berlin, Journal of Synchrotron Radiation, 19, 442, 10.1107/S0909049512006395
Mulder, 2010, Stepwise [FeFe]-hydrogenase H-cluster assembly revealed in the structure of HydA(DeltaEFG), Nature, 465, 248, 10.1038/nature08993
Müh, 2012, Light-induced quinone reduction in photosystem II, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1817, 44, 10.1016/j.bbabio.2011.05.021
Nickelsen, 2013, Photosystem II assembly: from cyanobacteria to plants, Annual Review of Plant Biology, 64, 609, 10.1146/annurev-arplant-050312-120124
Nicolet, 1999, Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center, Structure, 7, 13, 10.1016/S0969-2126(99)80005-7
Nixon, 2010, Recent advances in understanding the assembly and repair of photosystem II, Annals of Botany, 106, 1, 10.1093/aob/mcq059
Okumura, 2007, Aromatic structure of tyrosine-92 in the extrinsic PsbU protein of red algal photosystem II is important for its functioning, FEBS Letters, 581, 5255, 10.1016/j.febslet.2007.10.015
Peters, 1998, X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution, Science, 282, 1853, 10.1126/science.282.5395.1853
Pospísil, 2003, Stepwise transition of the tetra-manganese complex of photosystem II to a binuclear Mn2(micro -O)2 complex in response to a temperature jump: a time-resolved structural investigation employing x-ray absorption spectroscopy, Biophysical Journal, 84, 1370, 10.1016/S0006-3495(03)74952-2
Schmid, 2002, Structure of a cofactor-deficient nitrogenase MoFe protein, Science, 296, 352, 10.1126/science.1070010
Shen, 2015, The structure of Photosystem II and the mechanism of water oxidation in Photosynthesis, Annual Review of Plant Biology, 66, 23, 10.1146/annurev-arplant-050312-120129
Spatzal, 2011, Evidence for interstitial carbon in nitrogenase FeMo cofactor, Science, 334, 940, 10.1126/science.1214025
Styring, 2012, Two tyrosines that changed the world: interfacing the oxidizing power of photochemistry to water splitting in photosystem II, Biochimica Et Biophysica Acta (BBA) - Bioenergetics, 1817, 76, 10.1016/j.bbabio.2011.03.016
Suga, 2015, Native structure of photosystem II at 1.95 Å resolution viewed by femtosecond X-ray pulses, Nature, 517, 99, 10.1038/nature13991
Sugiura, 1999, Highly purified thermo-stable oxygen-evolving photosystem II core complex from the thermophilic Cyanobacterium synechococcus elongatus having His-tagged CP43, Plant and Cell Physiology, 40, 1219, 10.1093/oxfordjournals.pcp.a029510
Tanaka, 2017, Two different structures of the oxygen-evolving complex in the same polypeptide frameworks of Photosystem II, Journal of the American Chemical Society, 139, 1718, 10.1021/jacs.6b09666
Umena, 2011, Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å, Nature, 473, 55, 10.1038/nature09913
Wei, 2016, Structure of spinach photosystem II-LHCII supercomplex at 3.2 Å resolution, Nature, 534, 69, 10.1038/nature18020
Weichenberger, 2015, The solvent component of macromolecular crystals, Acta Crystallographica Section D Biological Crystallography, 71, 1023, 10.1107/S1399004715006045
Yano, 2014, Mn4Ca cluster in photosynthesis: where and how water is oxidized to dioxygen, Chemical Reviews, 114, 4175, 10.1021/cr4004874
Young, 2016, Structure of photosystem II and substrate binding at room temperature, Nature, 540, 453, 10.1038/nature20161