Structural and functional reconstruction in situ of the [CuSMoO2] active site of carbon monoxide dehydrogenase from the carbon monoxide oxidizing eubacterium Oligotropha carboxidovorans

JBIC Journal of Biological Inorganic Chemistry - Tập 10 - Trang 518-528 - 2005
Marcus Resch1, Holger Dobbek2, Ortwin Meyer1
1Lehrstuhl für Mikrobiologie, Bayreuther Zentrum für Molekulare Biowissenschaften (BZMB), Universität Bayreuth, Bayreuth, Germany
2Laboratorium für Proteinkristallographie, Universität Bayreuth, Bayreuth, Germany

Tóm tắt

Carbon monoxide dehydrogenase from the bacterium Oligotropha carboxidovorans catalyzes the oxidation of CO to CO2 at a unique [CuSMoO2] cluster. In the bacteria the cluster is assembled post-translational. The integration of S, and particularly of Cu, is rate limiting in vivo, which leads to CO dehydrogenase preparations containing the mature and fully functional enzyme along with forms of the enzyme deficient in one or both of these elements. The active sites of mature and immature forms of CO dehydrogenase were converted into a [MoO3] centre by treatment with potassium cyanide. We have established a method, which rescues 50% of the CO dehydrogenase activity by in vitro reconstitution of the active site through the supply of sulphide first and subsequently of Cu(I) under reducing conditions. Immature forms of CO dehydrogenase isolated from the bacterium, which were deficient in S and/or Cu at the active site, were similarly activated. X-ray crystallography and electron paramagnetic resonance spectroscopy indicated that the [CuSMoO2] cluster was properly reconstructed. However, reconstituted CO dehydrogenase contains mature along with immature forms. The chemical reactions of the reconstitution of CO dehydrogenase are summarized in a model, which assumes resulphuration of the Mo-ion at both equatorial positions at a 1:1 molar ratio. One equatorial Mo–S group reacts with Cu(I) in a productive fashion yielding a mature, functional [CuSMoO2] cluster. The other Mo–S group reacts with Cu(I), then Cu2S is released and an oxo group is introduced from water, yielding an inactive [MoO3] centre.

Tài liệu tham khảo

Meyer O, Gremer L, Ferner R, Ferner M, Dobbek H, Gnida M, Meyer-Klauke W, Huber R (2000) Biol Chem 381:865–876 Dobbek H, Gremer L, Kiefersauer R, Huber R, Meyer O (2002) Proc Natl Acad Sci USA 99:15971–15976 Gnida M, Ferner R, Gremer L, Meyer O, Meyer-Klaucke W (2003) Biochemistry 42:222–230 Dobbek H, Gremer L, Meyer O, Huber R (1999) Proc Natl Acad Sci USA 96:8884–8889 Gremer L, Kellner S, Dobbek H, Huber R, Meyer O (2000) J Biol Chem 275:1864–1872 Fuhrmann S, Ferner M, Jeffke T, Henne A, Gottschalk G, Meyer O (2003) Gene 322:67–75 Meyer O, Schlegel HG (1978) Arch Microbiol 118:35–43 Meyer O, Stackebrandt E, Auling G (1993) Syst Appl Microbiol 16:390–395 Kraut M, Hugendieck I, Herwig S, Meyer O (1989) Arch Microbiol 152:335–341 Okamoto K, Matsumoto K, Hille R, Eger BT, Pai EF, Nishino T (2004) Proc Natl Acad Sci USA 101:7931–7936 Bradford MM (1976) Analyt Biochem 72:248–254 Beisenherz G, Boltze HJ, Bücher T, Czok R, Garbade KH, Meyer-Arendt E, Pfleiderer G (1953) Z Naturforschg 8:555–577 Meyer O, Rajagopalan KV (1984) J Biol Chem 259:5612–5617 Laemmli UK (1970) Nature 227:680–685 Westley J (1981) Methods Enzymol 77:285–291 Minder W, Stocker E (1936) Z Kristallogr 94:137–142 Okaya Y, Knobler CB (1964) Acta Cryst 17:928–930 Morpurgo L, Rotilio G, Hartmann HJ, Weser U (1984) Biochem J 221:923–925 Kiefersauer R, Than M, Dobbek H, Gremer L, Melero M, Strobl S, Dias JM, Soulimane T, Huber R (2000) J Appl Crystallogr 33:1223–1230 Kabsch W (1993) J Appl Crystallogr 26:795–800 Turk D (1996) In: Bourne PE, Watepaugh K (eds) Meeting of the international union of crystallography macromolecular computing school. Bellingham, WA: International Union of Crystallography Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, Read RJ, Rice LM, Simonson T, Warren GL (1998) Acta Cryst D54:905–921 Laskowski RA, McArthur MW, Moss DS, Thornton JM (1993) J Appl Crystallogr 33:491–497 Wahl RC, Rajagopalan KV (1982) J Biol Chem 257:1354–1359 Maiti NC, Tomita T, Kitagawa T, Okamoto K, Nishino T (2003) J Biol Inorg Chem 8:327–333 DeLano WL (2002) The PyMOL user’s manual. DeLano Scientific, San Carlos Bray RC, George GN, Lange R, Meyer O (1983) Biochem J 211:687–694 Peariso K, Chohan BS, Carrano CJ, Kirk ML (2003) Inorg Chem 42:6194–6203