Sequence and expression analysis of HSP70 family genes in Artemia franciscana

Scientific Reports - Tập 9 Số 1
Wisarut Junprung1, Parisa Norouzitallab1, Stephanie De Vos1, Anchalee Tassanakajon2, Việt Dũng Nguyễn1, Gilbert Van Stappen1, Peter Bossier1
1Laboratory of Aquaculture & Artemia Reference Center, Department of Animal Sciences and Aquatic Ecology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
2Center of Excellence for Molecular Biology and Genomics of Shrimp, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand

Tóm tắt

AbstractThus far, only one gene from the heat shock protein 70 (HSP70) family has been identified in Artemia franciscana. Here, we used the draft Artemia transcriptome database to search for other genes in the HSP70 family. Four novel HSP70 genes were identified and designated heat shock cognate 70 (HSC70), heat shock 70kDa cognate 5 (HSC70-5), Immunoglobulin heavy-chain binding protein (BIP), and hypoxia up-regulated protein 1 (HYOU1). For each of these genes, we obtained nucleotide and deduced amino acid sequences, and reconstructed a phylogenetic tree. Expression analysis revealed that in the juvenile state, the transcription of HSP70 and HSC70 was significantly (P < 0.05) higher in a population of A. franciscana selectively bred for increased induced thermotolerance (TF12) relative to a control population (CF12). Following non-lethal heat shock treatment at the nauplius stage, transcription of HSP70, HSC70, and HSC70-5 were significantly (P < 0.05) up-regulated in TF12. In contrast, transcription of the other HSP70 family members in A. franciscana (BIP, HYOU1, and HSPA4) showed no significant (P > 0.05) induction. Gene expression analysis demonstrated that not all members of the HSP70 family are involved in the response to heat stress and selection and that especially altered expression of HSC70 plays a role in a population selected for increased thermotolerance.

Từ khóa


Tài liệu tham khảo

Roberts, R. J., Agius, C., Saliba, C., Bossier, P. & Sung, Y. Y. Heat shock proteins (chaperones) in fish and shellfish and their potential role in relation to fish health: a review. J. Fish. Dis. 33, 789–801 (2010).

Aleng, N. A., Sung, Y. Y., MacRae, T. H. & Abd Wahid, M. E. Non-Lethal Heat Shock of the Asian Green Mussel, Perna viridis, Promotes Hsp70 Synthesis, Induces Thermotolerance and Protects Against Vibrio Infection. PLoS One 10(8), e0135603, https://doi.org/10.1371/journal.pone.0135603 (2015).

Brocchieri, L., Conway de Macario, E. & Macario, A. J. Hsp70 genes in the human genome: Conservation and differentiation patterns predict a wide array of overlapping and specialized functions. BMC Evol. Biol. 8, 1–20 (2008).

Radons, J. The human HSP70 family of chaperones: where do we stand? Cell Stress Chaperones 21, 379–404 (2016).

Liu, T. & Cao, S. Heat Shock Protein 70 and Cancer. In HSP70 in Human Diseases and Disorders pp. 93–111 (2018).

Ren, J., Liu, C., Zhao, D. & Fu, J. The role of heat shock protein 70 in oxidant stress and inflammatory injury in quail spleen induced by cold stress. Environ. Sci. Pollut. Res. Int. 25, 21011–21023 (2018).

Daugaard, M., Rohde, M. & Jaattela, M. The heat shock protein 70 family: Highly homologous proteins with overlapping and distinct functions. FEBS Lett. 581, 3702–3710 (2007).

Wu, R., Sun, Y., Lei, L. M. & Xie, S. T. Molecular identification and expression of heat shock cognate 70 (HSC70) in the pacific white shrimp Litopenaeus vannamei. Mol. Bio. 42, 234–242 (2008).

Li, Y. et al. Heat shock cognate 70 gene in Haliotis diversicolor: responses to pathogen infection and environmental stresses and its transcriptional regulation analysis. Cell Stress Chaperones 23, 335–346 (2018).

Demand, J., Luders, J. & Hohfeld, J. The Carboxy-Terminal Domain of Hsc70 Provides Binding Sites for a Distinct Set of Chaperone Cofactors. Mol. Cell. Bio. 18, 2023–2028 (1998).

Freeman, B. C., Myers, M. P., Schumacher, R. & Morimoto, R. I. Identification of a regulatory motif in Hsp70 that affects ATPase activity, substrate binding and interaction with HDJ-1. EMBO J. 14, 2281–2292 (1995).

Dworniczak, B. & Mirault, M. E. Structure and expression of a human gene coding for a 71 kd heat shock ‘cognate’ protein. Nucleic. Acids. Res. 15, 5181–5197 (1987).

Shim, J. K. et al. Molecular cloning of the heat-shock cognate 70 (Hsc70) gene from the two-spotted spider mite, Tetranychus urticae, and its expression in response to heat shock and starvation. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 145, 288–295 (2006).

Zhang, Q. & Denlinger, D. Molecular characterization of heat shock protein 90, 70 and 70 cognate cDNAs and their expression patterns during thermal stress and pupal diapause in the corn earworm. J. Insect. Physiol. 56, 138–150 (2010).

Yuan, K. et al. Heat shock 70 kDa protein cognate 5 involved in WSSV toleration of Litopenaeus vannamei. Dev. Comp. Immunol. 72, 9–20 (2017).

Banerjee, S. & Chinthapalli, B. A proteomic screen with Drosophila Opa1-like identifies Hsc70-5/Mortalin as a regulator of mitochondrial morphology and cellular homeostasis. Int. J. Biochem. Cell Biol. 54, 36–48 (2014).

Luan, W., Li, F., Zhang, J., Wang, B. & Xiang, J. Cloning and expression of glucose regulated protein 78 (GRP78) in Fenneropenaeus chinensis. Mol. Bio. Rep. 36, 289–298 (2009).

Giffin, L., Yan, F., Major, M. B. & Damania, B. Modulation of Kaposi’s sarcoma-associated herpesvirus interleukin-6 function by hypoxia-upregulated protein 1. J. Virol. 88, 9429 (2014).

Regier, J. C. et al. Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences. Nature 463, 1079–1083 (2010).

Regier, J. C., Shultz, J. W. & Kambic, R. E. Pancrustacean phylogeny: hexapods are terrestrial crustaceans and maxillopods are not monophyletic. Proc. Biol. Sci. 272, 395–401 (2005).

Reumont, B. M. et al. Pancrustacean phylogeny in the light of new phylogenomic data: support for Remipedia as the possible sister group of Hexapoda. Mol. Biol. Evol. 29, 1031–1045 (2012).

Jondeung, A., Karinthanyakit, W. & Kaewkhumsan, J. The complete mitochondrial genome of the black mud crab, Scylla serrata (Crustacea: Brachyura: Portunidae) and its phylogenetic position among (pan)crustaceans. Mol. Bio. Rep. 39, 10921–10937 (2012).

Oakley, T. H., Wolfe, J. M., Lindgren, A. R. & Zaharoff, A. K. Phylotranscriptomics to bring the understudied into the fold: monophyletic ostracoda, fossil placement, and pancrustacean phylogeny. Mol. Biol. Evol. 30, 215–233 (2013).

Rota-Stabelli, O., Lartillot, N., Philippe, H. & Pisani, D. Serine codon-usage bias in deep phylogenomics: pancrustacean relationships as a case study. Syst. Biol. 62, 121–133 (2013).

Eyun, S. I. Phylogenomic analysis of Copepoda (Arthropoda, Crustacea) reveals unexpected similarities with earlier proposed morphological phylogenies. BMC Evol. Biol. 17, 23–23 (2017).

Norouzitallab, P., Baruah, K., Muthappa, D. M. & Bossier, P. Non-lethal heat shock induces HSP70 and HMGB1 protein production sequentially to protect Artemia franciscana against Vibrio campbellii. Fish Shellfish Immunol. 42, 395–399 (2015).

Rungrassamee, W., Leelatanawit, R., Jiravanichpaisal, P., Klinbunga, S. & Karoonuthaisiri, N. Expression and distribution of three heat shock protein genes under heat shock stress and under exposure to Vibrio harveyi in Penaeus monodon. Dev. Comp. Immunol. 34, 1082–1089 (2010).

Junprung, W., Supungul, P. & Tassanakajon, A. HSP70 and HSP90 are involved in shrimp Penaeus vannamei tolerance to AHPND-causing strain of Vibrio parahaemolyticus after non-lethal heat shock. Fish Shellfish Immunol. 60, 237–246 (2017).

Zhang, G. et al. The oyster genome reveals stress adaptation and complexity of shell formation. Nature 490, 49–54 (2012).

Colinet, H., Overgaard, J., Com, E. & Sorensen, J. G. Proteomic profiling of thermal acclimation in Drosophila melanogaster. Insect. Biochem. Mol. Biol. 43, 352–365 (2013).

Kumar, G. et al. Enhanced expression of heat-shock proteins in thermo-tolerant lines of sunflower and their progenies selected on the basis of temperature-induction response. Theor. Appl. Genet. 99, 359–367 (1999).

Iryani, M. et al. Knockdown of heat shock protein 70 (Hsp70) by RNAi reduces the tolerance of Artemia franciscana nauplii to heat and bacterial infection. J Exp Mar Bio Ecol. 487, 106–112 (2017).

Paim, R. et al. Functional evaluation of Heat Shock Proteins 70 (HSP70/HSC70) on Rhodnius prolixus (Hemiptera, Reduviidae) physiological responses associated with feeding and starvation. Insect Biochem Mol Biol. 77, 10–20 (2016).

Baruah, K. et al. Probing the protective mechanism of poly-ss-hydroxybutyrate against vibriosis by using gnotobiotic Artemia franciscana and Vibrio campbellii as host-pathogen model. Sci. Rep. 5, 1–8 (2015).

Livak, K. J. & Schmittgen, T. D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(−Delta Delta C(T)) Method. Methods 25, 402–408 (2001).