QuickGO: a web-based tool for Gene Ontology searching

Bioinformatics - Tập 25 Số 22 - Trang 3045-3046 - 2009
David Binns1, Emily Dimmer1, Rachael P. Huntley1, Daniel Barrell1, Claire O’Donovan1, Rolf Apweiler1
1European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK

Tóm tắt

Abstract Summary: QuickGO is a web-based tool that allows easy browsing of the Gene Ontology (GO) and all associated electronic and manual GO annotations provided by the GO Consortium annotation groups QuickGO has been a popular GO browser for many years, but after a recent redevelopment it is now able to offer a greater range of facilities including bulk downloads of GO annotation data which can be extensively filtered by a range of different parameters and GO slim set generation. Availability and Implementation: QuickGO has implemented in JavaScript, Ajax and HTML, with all major browsers supported. It can be queried online at http://www.ebi.ac.uk/QuickGO. The software for QuickGO is freely available under the Apache 2 licence and can be downloaded from http://www.ebi.ac.uk/QuickGO/installation.html Contact:  [email protected]; [email protected]

Từ khóa


Tài liệu tham khảo

Dimmer, 2008, The gene ontology - providing a functional role in proteomic studies, Proteomics, 10.1002/pmic.200800002

Barrell, 2009, The GOA database in 2009–an integrated gene ontology annotation resource, Nucleic Acids Res., 37, D396, 10.1093/nar/gkn803

UniProt Consortium, 2009, The Universal Protein resource (UniProt), Nucleic Acids Res., 37, D169, 10.1093/nar/gkn664

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Thông tin xuất bản

Bioinformatics

Tập 25 Số 22

3045-3046

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