Plant polyphenols as electron donors for erythrocyte plasma membrane redox system: validation through in silico approach

Rajesh K. Kesharwani1, Durg Vijay Singh2, Krishna Misra1, Syed Ibrahim Rizvi3
1Division of Applied Science & Indo-Russian Center for Biotechnology [IRCB], Indian Institute of Information Technology, Allahabad, India
2Department of Bioinformatics, UIET, CSJM University, Kanpur, India
3Department of Biochemistry, University of Allahabad, Allahabad, India

Tóm tắt

Abstract Background The plasma membrane redox system (PMRS) has extensively been studied in erythrocytes. The PMRS plays an important role in maintaining plasma redox balance and provides a protective mechanism against oxidative stress. Earlier it was proposed that only NADH or NADPH provided reducing equivalents to PMRS; however, now it is acknowledged that some polyphenols also have the ability to donate reducing equivalents to PMRS. Methods Two different docking simulation softwares, Molegro Virtual Docker and Glide were used to study the interaction of certain plant polyphenols viz. quercetin, epigallocatechin gallate, catechin epicatechin and resveratrol with human erythroyte NADH-cytochrome b5 reductase, which is a component of PMRS and together with the identification of minimum pharmacophoric feature using Pharmagist. Results The derived common minimum pharmacophoric features show the presence of minimum bioactive component in all the selected polyphenols. Our results confirm wet lab findings which show that these polyphenols have the ability to interact and donate protons to the Human NADH-cytochrome b5 reductase. Conclusion With the help of these comparative results of docking simulation and pharmacophoric features, novel potent molecules can be designed with higher efficacy for activation of the PMRS system.

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Tài liệu tham khảo

Orringer EP, Roer ME: An ascorbate mediated transmembrane reducing system of the human erythrocytes. J Clin Invest 1979, 63: 53–58. doi:10.1172/JCI109277 10.1172/JCI109277

Greibing C, Crane FL, Low H, Hall K: A transmembranous NADH dehydrohgenase in human erythrocyte membranes. J Bioenerg Biomembr 1984, 16: 517–533. doi:10.1007/BF00743243 10.1007/BF00743243

Kilberg MS, Christensen HN: Electron transferring enzymes in the plasma membrane of the Ehrlich ascites tumor cell. Biochemistry 1979, 18: 1525–1530. doi:10.1021/bi00575a021 10.1021/bi00575a021

Crane FL, Sun IL, Clark MG, Grebing C, Low H: Transplasma membrane redox systems in growth and development. Biochim Biophys Acta 1985, 811: 233–264. doi:10.1016/0304–4173(85)90013–8

Rubinstein B, Luster DG: Plasma membrane redox activity: components and role in plant processes. Ann Rev Plant Physiol Plant Mol Biol 1993, 44: 131–155. doi:10.1146/annurev.pp. 44.060193.001023 10.1146/annurev.pp.44.060193.001023

Herst PM, Berridge MV: Plasma membrane electron transport: a new target for cancer drug development. Curr Mol Med 2006, 6: 895–904. doi: http://dx.doi.org/10.2174/156652406779010777 10.2174/156652406779010777

Ly JD, Lawen A: Transplasma membrane electron transport: enzymes involved and biological function. Redox Rep 2003, 8: 3–21. doi:10.1179/135100003125001198 10.1179/135100003125001198

Rizvi SI, Jha R, Maurya PK: Erythrocyte plasma membrane redox system in human aging. Rejuvenation Res 2006, 9: 470–474. doi:10.1089/rej.2006.9.470 10.1089/rej.2006.9.470

Rizvi SI, Pandey KB, Jha R, Maurya PK: Ascorbate recycling by erythrocytes during aging in humans. Rejuvenation Res 2009,12(1):3–6. doi:10.1089/rej.2008.0787 10.1089/rej.2008.0787

Rizvi SI, Srivastava N: Erythrocyte plasma membrane redox system in first degree relatives of type 2 diabetic patients. Int J Diab Mellitus 2010, 2: 119–121. doi:10.1016/j.ijdm.2010.05.005 10.1016/j.ijdm.2010.05.005

Correll CC, Batie CJ, Ballou DP, Ludwig ML: Pthalate dioxygenase reductase: a modular structure for electron transfer from pytidine nucleotides to [2Fe-2S]. Science 1992, 258: 1604–1610. doi:10.1126/science.1280857 10.1126/science.1280857

Rizvi SI, Pandey KB: Activation of the erythrocyte plasma membrane redox system by resveratrol: a possible mechanism for antioxidant properties. Pharmacol Rep 2011,62(4):726–732.

Rizvi SI, Jha R, Pandey KB: Activation of erythrocyte plasma membrane redox system provides a useful method to evaluate antioxidant potential of plant polyphenols Methods Mol Biol. 2010, 594: 341–348. doi:10.1007/978–1-60761–411–1_24

Rizvi SI, Jha R: Strategies for the discovery of anti-aging compounds. Expert Opin Drug Dis 2011,8(1):89–102. doi: http://dx.doi.org/10.1517/17460441.2011.533653

Thomsen R, Christensen MH: MolDock: a new technique for high-accuracy molecular docking. J Med Chem 2006,49(11):3315–3321. doi:10.1021/jm051197e 10.1021/jm051197e

Friesner RA, Murphy RB, Repasky MP, Frye LL, Greenwood JR, Halgren TA, Sanschagrin PC, Mainz DT: Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes. J Med Chem 2006,149(21):6177–6196. doi:10.1021/jm051256o

Schneidman-Duhovny D, Dror O, Inbar Y, Nussinov R, Wolfson HJ: Deterministic pharmacophore detection via multiple flexible alignment of drug-like molecules. J Comput Biol 2008,15(7):737–754. 10.1089/cmb.2007.0130

Bando S, Takano T, Yubisui T, Shirabe K, Takeshita M, Nakagawa A: Structure of human erythrocyte NADH-cytochrome 5 reductase. Acta Cryst 2004,60(11):1929–1934. doi:10.1107/S090744490402 0645

Dutta S, Burkhardt K, Swaminathan GJ, Kosada T, Henrick K, Nakamura H, Berman HM: Data Deposition and Annotation at the Worldwide Protein Data Bank. Mol Biotechnol 2009,42(1):1–13. doi:10.1007/s12033–008–9127–7 10.1007/s12033-008-9127-7

Jacobson MP, Pincus DL, Rapp CS, Day TJ, Honig B, Shaw DE, Friesner RA: A hierarchical approach to all-atom protein loop prediction. Proteins 2004,55(2):351–367. doi:10.1002/prot.10613 10.1002/prot.10613

Albers HMHG, Hendrickx LJD, van Tol RJP, Hausmann J, Perrakis A, Ovaa H: Structure-based design of novel boronic acid-based inhibitors of autotoxin. J Med Chem 2011,54(13):4619–4626. doi:10.1021/jm200310q 10.1021/jm200310q

Rizvi SI, Kumar D, Chakravarti S, Singh P: Erythrocyte plasma membrane redox system may determine maximum life span. Medical Hyp 2011,76(4):547–549. doi:10.1016/j.mehy.2010.12.014 10.1016/j.mehy.2010.12.014