Phylogeography: retrospect and prospect

Journal of Biogeography - Tập 36 Số 1 - Trang 3-15 - 2009
John C. Avise1
1University of California, Irvine

Tóm tắt

Abstract

Phylogeography has grown explosively in the two decades since the word was coined and the discipline was outlined in 1987. Here I summarize the many achievements and novel perspectives that phylogeography has brought to population genetics, phylogenetic biology and biogeography. I also address future directions for the field. From the introduction of mitochondrial DNA assays in the late 1970s, to the key distinction between gene trees and species phylogenies, to the ongoing era of multi‐locus coalescent theory, phylogeographic perspectives have consistently challenged conventional genetic and evolutionary paradigms, and they have forged empirical and conceptual bridges between the formerly separate disciplines of population genetics (microevolutionary analysis) and phylogenetic biology (in macroevolution).

Từ khóa


Tài liệu tham khảo

10.3732/ajb.93.12.1852

10.1046/j.1523-1739.1995.09030686.x

10.1046/j.1365-294X.2003.01731.x

10.1007/1-4020-4904-8_1

Avise J.C., 1990, Principles of genealogical concordance in species concepts and biological taxonomy, Oxford Surveys in Evolutionary Biology, 7, 45

10.1073/pnas.76.12.6694

10.1073/pnas.83.12.4350

10.1111/j.1365-294X.2005.02655.x

Avise J.C., 1988, Current versus historical population sizes in vertebrate species with high gene flow: a comparison based on mitochondrial DNA lineages and inbreeding theory for neutral mutations, Molecular Biology and Evolution, 5, 331

10.1073/pnas.90.17.8239

10.1073/pnas.85.5.1558

Bermingham E., 1998, Comparative phylogeography: concepts and applications, Molecular Ecology, 7, 367, 10.1046/j.1365-294x.1998.00424.x

10.1016/B978-012417540-2/50009-9

10.1073/pnas.90.20.9271

10.1007/978-1-4757-2504-9_7

10.1073/pnas.86.2.573

10.1073/pnas.76.4.1967

10.1073/pnas.91.11.5197

Dawkins R., 1995, River out of Eden

10.1111/j.1558-5646.1996.tb03638.x

Excoffier L., 2004, Analytical methods in phylogeography, Molecular Ecology, 13, 727, 10.1111/j.1365-294X.2004.02170.x

10.1111/j.1365-2699.2007.01772.x

10.1016/S0169-5347(01)02326-6

10.1038/35016000

Hudson R.R., 1990, Gene genealogies and the coalescent process, Oxford Surveys in Evolutionary Biology, 7, 1

Knowles L.L., 2008, Statistical phylogeography: the use of coalescent approaches to infer evolutionary history, Annual Review of Ecology, Evolution, and Systematics, 39

10.1046/j.1365-294X.2002.01410.x

10.1126/science.8503007

10.1016/0168-9525(90)90125-P

10.1046/j.1365-294X.2003.02041.x

Weiss S., 2006, The phylogeography of southern European refugia

10.1111/j.1558-5646.1996.tb04495.x