Phylogeography of theBothrops jararacacomplex (Serpentes: Viperidae): past fragmentation and island colonization in the Brazilian Atlantic Forest

Molecular Ecology - Tập 15 Số 13 - Trang 3969-3982 - 2006
Felipe G. Grazziotin1, MARKUS MONZEL2, Sérgio Echeverrigaray3, Sandro L. Bonatto1
1Centro de Biologia Genômica e Molecular, PUCRS, 90619-900, Porto Alegre, RS, Brazil,
2University of Trier, Department of Biogeography, D-54296 Trier, Germany,
3Laboratório de Biotecnologia Vegetal e Microbiologia Aplicada, UCS, 95070-560, Caxias do Sul, RS, Brazil

Tóm tắt

Abstract

The Brazilian Atlantic Forest is one of the world's major biodiversity hotspots and is threatened by a severe habitat loss. Yet little is known about the processes that originated its remarkable richness of endemic species. Here we present results of a large‐scale survey of the genetic variation at the mitochondrial cytochromebgene of the pitviper, jararaca lancehead (Bothrops jararaca), and two closely related insular species (Bothrops insularisandBothrops alcatraz), endemic of this region. Phylogenetic and network analyses revealed the existence of two well‐supported clades, exhibiting a southern and a northern distribution. The divergence time of these two phylogroups was estimated at 3.8 million years ago, in the Pliocene, a period of intense climatic changes and frequent fragmentation of the tropical rainforest. Our data also suggest that the two groups underwent a large size expansion between 50 000 and 100 000 years ago. However, the southern group showed a more marked signal of population size fluctuation than the northern group, corroborating evidences that southern forests may have suffered a more pronounced reduction in area in the late Pleistocene. The insular speciesB. alcatrazandB. insularispresented very low diversity, each one sharing haplotypes with mainland individuals placed in different subclades. Despite their marked morphological and behavioural uniqueness, these two insular species seem to have originated very recently and most likely from distinct costalB. jararacapopulations, possibly associated with late Pleistocene or Holocene sea level fluctuations.

Từ khóa


Tài liệu tham khảo

Arbogast BS, 2002, Estimating divergence times from molecular data on population genetic and phylogenetic time scales, Annual Review of Ecology and Systematics, 33, 707, 10.1146/annurev.ecolsys.33.010802.150500

10.1046/j.1365-294X.2003.01731.x

10.1093/oxfordjournals.molbev.a026036

10.1016/S0921-8181(02)00065-6

10.1006/qres.1997.1932

10.1006/qres.2001.2264

Bricker J, 1996, Purification of high quality DNA from shed skin, Herpetological Review, 27, 133

Campbell JA, 2004, The Venomous Reptiles of the Western Hemisphere

10.1080/10635150590945377

Chatigny ME, 2000, The extraction of DNA from formalin‐fixed, ethanol‐preserved reptile and amphibian tissues, Herpetological Review, 31, 86

10.1016/0041-0101(93)90397-2

10.1016/S1055-7903(02)00308-1

10.1046/j.1365-2699.2003.00792.x

DrummondAJ RambautA(2003)beast version 1.0 Available fromhttp://evolve.zoo.ox.ac.uk/beast/.

10.1046/j.1365-294X.2002.01650.x

10.1093/genetics/131.2.479

Fox W, 1961, Morphological effects of low temperatures during the embryonic development of the Garter Snake, Thamnophis elegans, Zoologica, 46, 57

10.1093/genetics/147.2.915

10.1093/genetics/133.3.693

10.1146/annurev.ecolsys.34.011802.132421

10.1016/j.cca.2004.09.016

10.1046/j.0962-1083.2001.01393.x

10.1126/science.165.3889.131

10.1046/j.1365-2540.2001.00895.x

Hillis DM, 1996, Molecular Systematics, 515

Hoge AR, 1977, Variação do número de placas ventrais de Bothrops jararaca em função dos climas (Viperidae, Crotalinae), Memórias do Instituto Butantan, 40, 11

10.1093/genetics/132.2.583

10.1093/bioinformatics/17.8.754

10.1111/j.0014-3820.2005.tb01072.x

10.1111/j.0014-3820.2000.tb00041.x

10.1093/bioinformatics/btk051

10.1111/j.1096-3642.2000.tb02205.x

10.1016/0031-0182(96)00105-8

10.1655/0018-0831(2002)058[0303:ANISOP]2.0.CO;2

10.1017/S0952836901001030

10.1093/jhered/esi119

10.1111/j.1538-4632.1973.tb01011.x

10.1016/0169-5347(94)90057-4

10.1146/annurev.ecolsys.31.1.533

10.1038/35002501

10.1093/genetics/158.2.885

10.1111/j.1095-8312.2005.00472.x

10.1006/mpev.1999.0756

10.1093/bioinformatics/14.9.817

10.1080/10635150490522304

Potter PE, 1998, The Mesozoic and Cenozoic paleodrainage of South America: a natural history, Journal of South American Earth Sciences, 10, 331, 10.1016/S0895-9811(97)00031-X

10.1016/S1055-7903(03)00223-9

10.1590/S0036-46651990000600008

10.2307/1565694

10.1007/BF00183792

10.1093/bioinformatics/btg359

Salomão MG, 1997, Venomous Snakes: Ecology, Evolution and Snakebite, 89

10.1093/oxfordjournals.molbev.a003974

10.1002/jez.b.19

Sazima I, 1992, Biology of the Pitvipers, 199

Schneider S, 2000, arlequin: A Software for Population Genetic Data Analysis

Simpson BB, 1979, The South American Herpetofauna: Its Origin, Evolution, and Dispersal, 157

Swofford DL, 2002, paup*. Phylogenetic Analysis Using Parsimony (*and Other Methods)

Tajima F, 1983, Evolutionary relationship of DNA sequences in finite populations, Genetic, 105, 437, 10.1093/genetics/105.2.437

10.1093/nar/25.24.4876

10.1016/j.tig.2005.04.002

Vanzolini PE, 1981, The vanishing refuge: a mechanism for ecogeographic speciation, Papéis Avulsos de Zoologia., 34, 251, 10.11606/0031-1049.1980.34.p251-255

10.1126/science.258.5081.451

Werman S, 2005, Ecology and Evolution in the Tropics, 306

Wüster W, 1999, Mitochondrial DNA phylogeny of Bothrops atrox species complex (Squamata: Serpentes: Viperidae), Kaupia – Darmstädter Beiträge zur Naturgeschichte, 8, 135

Wüster W, 2002, Biology of the Vipers, 111

10.1017/S0952836904006247

10.1111/j.1365-294X.2005.02471.x

Zamudio KR, 1997, Phylogeography of the bushmaster (Lachesis muta: Viperidae): implications for Neotropical biogeography, systematics and conservation, Biological Journal of the Linnean Society, 62, 421, 10.1006/bijl.1997.0162