Phylogenetic congruence of lichenised fungi and algae is affected by spatial scale and taxonomic diversity
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Ahmadjian, 1993, The lichen symbiosis
Balbuena, 2012, PACo: a novel Procrustes application to cophylogenetic analysis, PLoS ONE, 8, e61048, 10.1371/journal.pone.0061048
Beck, 1999, Photobiont inventory of a lichen community growing on heavy-metal-rich rock, The Lichenologist, 31, 501, 10.1017/S0024282999000651
Beck, 1998, Selectivity of photobiont choice in a defined lichen community: inferences from cultural and molecular studies, New Phytologist, 139, 709, 10.1046/j.1469-8137.1998.00231.x
Beck, 2002, Myco-photobiontal selection in a Mediterranean cryptogam community with Fulgensia fulgida, New Phytologist, 153, 317, 10.1046/j.0028-646X.2001.00315.x
Bertness, 1994, Positive interactions in communities, Trends in Ecology & Evolution, 9, 191, 10.1016/0169-5347(94)90088-4
Buckley, 2011, Isolation affects tree-scale epiphytic lichen community structure on New Zealand mountain beech trees, Journal of Vegetation Science, 22, 1062, 10.1111/j.1654-1103.2011.01315.x
Chase, 2003, Ecological niches: linking classical and contermporary approaches, 10.7208/chicago/9780226101811.001.0001
Cuthill, Phylogenetic codivergence supports coevolution of mimetic Heliconius butterflies, PLoS ONE, 7, e36464, 10.1371/journal.pone.0036464
Dal Grande, 2012, Vertical and horizontal photobiont transmission within populations of a lichen symbiosis, Molecular Ecology, 21, 3159, 10.1111/j.1365-294X.2012.05482.x
del Campo, 2013, The genetic structure of the cosmopolitan three-partner lichen Ramalina farinacea evidences the concerted diversification of symbionts, FEMS Microbiology Ecology, 83, 310, 10.1111/j.1574-6941.2012.01474.x
DePriest, 2004, Early molecular investigations of lichen-forming symbionts: 1986–2001, Annual Review of Microbiology, 58, 273, 10.1146/annurev.micro.58.030603.123730
du Toit, 2013, Biogeography and host-related factors trump parasite life history: limited congruence among the genetic structures of specific ectoparasitic lice and their rodent hosts, Molecular Ecology, 22, 5185, 10.1111/mec.12459
Elias, 2008, Mutualistic interactions drive ecological niche convergence in a diverse butterfly community, PLoS Biology, 6, e300, 10.1371/journal.pbio.0060300
Fahselt, 2008, Individuals and populations of lichens, Lichen biology, 2, 10.1017/CBO9780511790478.014
Fernández-Mendoza, 2011, Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata, Molecular Ecology, 20, 1208, 10.1111/j.1365-294X.2010.04993.x
Gross, 2008, Positive interactions among competitors can produce species-rich communities, Ecology Letters, 11, 929, 10.1111/j.1461-0248.2008.01204.x
Grube, 2010, Identifying algal symbionts in lichen symbioses, Tools for identifying biodiversity: progress and problems, 295
Henskens, 2012, Cyanolichens can have both cyanobacteria and green algae in a common layer as major contributors to photosynthesis, Annals of Botany, 110, 555, 10.1093/aob/mcs108
Hollants, 2013, Host specificity and coevolution of Flavobacteriaceae endosymbionts within the siphonous green seaweed Bryopsis, Molecular Phylogenetics and Evolution, 67, 608, 10.1016/j.ympev.2013.02.025
Honegger, 1991, Functional aspects of the lichen symbiosis, Annual Review of Plant Physiology and Plant Molecular Biology, 42, 553, 10.1146/annurev.pp.42.060191.003005
Kroken, 2000, Phylogenetic species, reproductive mode, and specificity of the green alga trebouxia forming lichens with the fungal genus letharia, The Bryologist, 103, 645, 10.1639/0007-2745(2000)103[0645:PSRMAS]2.0.CO;2
LaJeunesse, 2002, Diversity and community structure of symbiotic dinoflagellates from Caribbean coral reefs, Marine Biology, 141, 387, 10.1007/s00227-002-0829-2
Lanterbecq, 2010, Evidence for cospeciation events in the host–symbiont system involving crinoids (Echinodermata) and their obligate associates, the myzostomids (Myzostomida, Annelida), Molecular Phylogenetics and Evolution, 54, 357, 10.1016/j.ympev.2009.08.011
Light, 2008, Codivergence in heteromyid rodents (Rodentia: Heteromyidae) and their sucking lice of the genus fahrenholzia (Phthiraptera: Anoplura), Systematic Biology, 57, 449, 10.1080/10635150802169610
Löytynoja, 2005, An algorithm for progressive multiple alignment of sequences with insertions, Proceedings of the National Academy of Sciences of the United States of America, 102, 10557, 10.1073/pnas.0409137102
Marini, 2011, Large-scale patterns of epiphytic lichen species richness: photobiont-dependent response to climate and forest structure, Science of the Total Environment, 409, 4381, 10.1016/j.scitotenv.2011.07.010
Nelsen, 2008, Dissociation and horizontal transmission of codispersing lichen symbionts in the genus Lepraria (Lecanorales: Stereocaulaceae), New Phytologist, 177, 264, 10.1111/j.1469-8137.2007.02241.x
Oksanen, 2013, vegan: community ecology package, 2.0-9
Peksa, 2011, Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae), Molecular Ecology, 20, 3936, 10.1111/j.1365-294X.2011.05168.x
Peres-Neto, 2006, Variation partitioning of species data matrices: estimation and comparison of fractions, Ecology, 87, 2614, 10.1890/0012-9658(2006)87[2614:VPOSDM]2.0.CO;2
Piercey-Normore, 2001, Algal switching among lichen symbioses, American Journal of Botany, 88, 1490, 10.2307/3558457
Quek, 2004, Codiversification in ant-plant mutualism: stem texture and the evolution of host use in Crematogaster (Formicidae: Myrmicinae) inhabitants of Macaranga (Euphorbiaceae), Evolution, 58, 554, 10.1111/j.0014-3820.2004.tb01678.x
R Core Team, 2013, R: a language and environment for statistical computing
Ruprecht, 2012, Genetic diversity of photobionts in Antarctic lecideoid lichens from an ecological view point, The Lichenologist, 44, 661, 10.1017/S0024282912000291
Sanders, 2005, Observing microscopic phases of lichen life cycles on transparent substrata placed in situ, The Lichenologist, 37, 373, 10.1017/S0024282905015070
Stachowicz, 2001, Mutualism, facilitation, and the structure of ecological communities: positive interactions play a critical, but underappreciated, role in ecological communities by reducing physical or biotic stresses in existing habitats and by creating new habitats on which many species depend, BioScience, 51, 235, 10.1641/0006-3568(2001)051[0235:MFATSO]2.0.CO;2
Subbotin, 2004, Evolution of the gall-forming plant parasitic nematodes (Tylenchida: Anguinidae) and their relationships with hosts as inferred from Internal Transcribed Spacer sequences of nuclear ribosomal DNA, Molecular Phylogenetics and Evolution, 30, 226, 10.1016/S1055-7903(03)00188-X
Tamura, 1993, Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees, Molecular Biology and Evolution, 10, 512
Thrall, 2007, Coevolution of symbiotic mutualists and parasites in a community context, Trends in Ecology & Evolution, 22, 120, 10.1016/j.tree.2006.11.007
Tilman, 1982, Resource competition and community structure
Vargas Castillo, 2012, Photobiont selectivity and specificity in Caloplaca species in a fog-induced community in the Atacama Desert, northern Chile, Fungal Biology, 116, 665, 10.1016/j.funbio.2012.04.001
Walker, 2014, Host conservatism or host specialization? Patterns of fungal diversification are influenced by host plant specificity in Ophiognomonia (Gnomoniaceae: Diaporthales), Biological Journal of the Linnean Society, 111, 1, 10.1111/bij.12189
Walser, 2004, Molecular evidence for limited dispersal of vegetative propagules in the epiphytic lichen Lobaria pulmonaria, American Journal of Botany, 91, 1273, 10.3732/ajb.91.8.1273
Waterman, 2011, The effects of above- and belowground mutualisms on orchid speciation and coexistence, The American Naturalist, 177, E54, 10.1086/657955
Werth, 2007, Landscape-level gene flow in Lobaria pulmonaria, an epiphytic lichen, Molecular Ecology, 16, 2807, 10.1111/j.1365-294X.2007.03344.x
Werth, 2011, Congruent genetic structure in the lichen-forming fungus Lobaria pulmonaria and its green-algal photobiont, Molecular Plant-Microbe Interactions, 25, 220, 10.1094/MPMI-03-11-0081
Widmer, 2012, European phylogeography of the epiphytic lichen fungus Lobaria pulmonaria and its green algal symbiont, Molecular Ecology, 21, 5827, 10.1111/mec.12051
Yahr, 2004, Strong fungal specificity and selectivity for algal symbionts in Florida scrub Cladonia lichens, Molecular Ecology, 13, 3367, 10.1111/j.1365-294X.2004.02350.x