Phycobiliprotein diffusion in chloroplasts of cryptophyte Rhodomonas CS24

Allen JF, Forsberg J (2001) Molecular recognition in thylakoid structure and function. Trends Plant Sci 6:317–326. doi:10.1016/S1360-1385(01)02010-6 Aspinwall CL, Sarcina M, Mullineaux CW (2004) Phycobilisome mobility in the cyanobacterium Synechococcus sp. PCC7942 is influenced by the trimerisatio of Photosystem I. Photosynth Res 79:179–187. doi:10.1023/B:PRES.0000015399.43503.95 Baksh MM, Jaros M, Groves JT (2004) Detection of molecular interactions at membrane surfaces through colloid phase transitions. Nature 427:139–141. doi:10.1038/nature02209 Bauer C (2004) Regulation of photosystem synthesis in Rhodobacter capsulatus. Photosynth Res 80:353–360. doi:10.1023/B:PRES.0000030440.99968.68 Brejc K, Fickner R, Huber R, Steinbacher S (1995) Isolation, crystallization, crystal-structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 Angstrom resolution. J Mol Biol 249:424–440. doi:10.1006/jmbi.1995.0307 Bruce D, Biggins J, Steiner T, Thewalt M (1986) Excitation-energy transfer in the crypotphytes-fluorescence excitation-spectra and picosecond time-resolved emission-spectra of intact algae at 77K. Photochem Photobiol 44:519–525. doi:10.1111/j.1751-1097.1986.tb04702.x Dayel MJ, Hom EFY, Verkman AS (1999) Diffusion of green fluorescent protein in the aqueous-phase lumen of endoplasmatic reticulum. Biophys J 76:2843–2851. doi:10.1016/S0006-3495(99)77438-2 Doust AB, Marai CNG, Harrop SJ, Wilk KE, Curmi PMG, Scholes GD (2004) Developing a structure-function model for the cryptophyte phycoerythrin 545 using ultrahigh resolution crystallography and ultrafast laser spectroscopy. J Mol Biol 344:135–153. doi:10.1016/j.jmb.2004.09.044 Elowitz MB, Surette MG, Wolf PE, Stock JB, Leibler S (1999) Protein mobility in the cytoplasm of Escherichia coli. J Bacteriol 181:197–203 Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S (2004) Architecture of photosynthetic oxygen-evolving center. Science 303:1831–1838. doi:10.1126/science.1093087 Gantt E (1981) Phycobilisomes. Annu Rev Plant Physiol Plant Mol Biol 32:327–347 Gardiner AT, Cogdell RJ, Takaichi S (1993) The effect of growth-conditions on the light-harvesting apparatus in Rhodopseudomonas acidophila. Photosynth Res 38:159–167. doi:10.1007/BF00146415 Harnischfeger G, Herold B (1981) Aspects of energy-transfer between phycobilins and chlorophyll in chroomonas spec (crypotphycea). Ber Dtsch Bot Ges 94:65–73 Ingram K, Hiller RG (1983) Isolation and characterization of a major chlorophyll-a/c2 light-harvesting protein from a Chroomonas species (Cryptophyceae). Biochim Biophys Acta 722:310–319. doi:10.1016/0005-2728(83)90078-6 Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N (2001) Three-dimensional structure of cyanobacterial photosystem I at 2.5 angstrom resolution. Nature 441:909–917. doi:10.1038/35082000 Joshua S, Mullineaux CW (2004) Phycobilisome diffusion is required for light-state transitions in cyanobacteria. Plant Physiol 135:2112–2119. doi:10.1104/pp.104.046110 Kirchhoff H, Mukherjee U, Galla HJ (2002) Molecular architecture of the thylakoid membrane: lipid diffusion space for plastoquinone. Biochemistry 41:4872–4882. doi:10.1021/bi011650y Kirchhoff H, Haferkamp S, Allen JF, Epstein DBA, Mullineaux CW (2008) Protein diffusion and macromolecular crowding in thylakoid membranes. Plant Physiol 146:1571–1578. doi:10.1104/pp.107.115170 Kurisu G, Zhang HM, Smith JL, Cramer WA (2003) Structure of cytochrome b(6)f complex of oxygenic photosynthesis: tuning the cavity. Science 302:1009–1014. doi:10.1126/science.1090165 Lichtle C (1979) Effects of nitrogen deficiency and light of high intensity on Cryptomonas rufescens (Cryptophyceae) I. Cell and photosynthetic apparatus transformations and encystment. Protoplasma 101:283–299. doi:10.1007/BF01276969 Lichtle C (1980) Effects of nitrogen deficiency and light of high intensity on Cryptomonas rufescens (Cryptophyceae) II. Excystment. Protoplasma 102:11–19. doi:10.1007/BF01276944 Lippincott-Schwartz J, Snapp E, Kenworthy A (2001) Studying protein dynamics in living cells. Nat Rev Mol Cell Biol 2(6):444–456. doi:10.1038/35073068 Ludwig M, Gibbs SP (1989) Localization of phycoerythrin at the lumenal surface of the thylakoid membrane in Rhodomonas-lens. J Cell Biol 108:875–884. doi:10.1083/jcb.108.3.875 Mimuro M, Tamai N, Murakami A, Watanabe M, Erata M, Watanabe MM, Tokutomi M, Yamazaki I (1998) Multiple pathways of excitation energy flow in the photosynthetic pigment system of a cryptophyte, Cryptomonassp. (CR-1)*. Psychol Res 46:155–164 Mirkovic T, Doust AB, Kim J, Wilk KE, Curutchet C, Mennucci B, Cammi R, Curmi PMG, Scholes GD (2007) Ultrafast light harvesting dynamics in the cryptophyte phycocyanin 645. Photochem Photobiol Sci 6:964–975 Mörschel E, Wehrmeyer W (1979) Elektronenmikroskopische Feinstrukturanalyse von nativen Biliproteidaggregaten und deren räumliche Ordnung. Ber Dtsch Bot Ges 92:393–402 Mullineaux CW (2004) FRAP analysis of photosynthetic membranes. J Exp Bot 55:1207–1211. doi:10.1093/jxb/erh106 Mullineaux CW, Tobin MJ, Jones GR (1997) Mobility of photosynthetic complexes in thylakoid membranes. Nature 390:421–424. doi:10.1038/37157 Mullineaux CW, Nenninger A, Ray N, Robionson C (2006) Diffusion of green fluorescent protein in three cell environments in Escherichia coli. J Bacteriol 188:3442–3448. doi:10.1128/JB.188.10.3442-3448.2006 Mustardy L, Garab G (2003) Granum revisited. A three-dimensional model where things fall into place. Trends Plant Sci 8:117–122. doi:10.1016/S1360-1385(03)00015-3 Nagle JF (1992) Long tail kinetics in biophysics. Biophys J 63:366–370. doi:10.1016/S0006-3495(92)81602-8 Partikian A, Ölveczky B, Swaminathan R, Li Y, Verkman AS (1998) Rapid diffusion of green fluorescent protein in the mitochondrial matrix. J Cell Biol 140:821–829. doi:10.1083/jcb.140.4.821 Potma EO, de Boeij WP, Bosgraaf L, Roelofs J, van Haastert PJM, Wiersma DA (2001) Reduced protein diffusion rate by cytoskeleton in vegetative and polarized Dictyostelium cells. Biophys J 81(4):2010–2019. doi:10.1016/S0006-3495(01)75851-1 Santore MM, Kozlova N (2007) Micrometer scale adhesion on nanometer-scale patchy surfaces: adhesion rates, adhesion thresholds, and curvature-based selectivity. Langmuir 23:4782–4791. doi:10.1021/la063546t Sarcina M, Mullineaux CW (2004) Mobility of the IsiA chlorophyll-binding protein in cyanobacterial thylakoid membranes. J Biol Chem 279:36514–36518. doi:10.1074/jbc.M405881200 Sarcina M, Tobin MJ, Mullineaux CW (2001) Diffusion of phycobilisomes on the thylakoid membranes of the cyanobacterium Synechococcus 7942. J Biol Chem 50:46830–46834. doi:10.1074/jbc.M107111200 Scholes GD, Rumbles G (2006) Excitons in nanoscale systems. Nat Mater 5:683–696. doi:10.1038/nmat1710 Scholes GD, Jordanides XJ, Fleming GR (2001) Adapting the Förster theory of energy transfer for modeling dynamics in aggregated molecular assemblies. J Phys Chem B 105:1640–1651. doi:10.1021/jp003571m Sheetz MP (1993) Glycoprotein motility and dynamic domains in fluid plasma-membranes. Annu Rev Biophys Biomol Struct 22:417–431. doi:10.1146/annurev.bb.22.060193.002221 Smith H (2000) Phytochromes and light signal perception by plants—an emerging synthesis. Nature 407:585–591. doi:10.1038/35036500 Spear-Bernstein L, Miller KR (1985) Are the photosynthetic membranes of cryptophyte algae inside out. Protoplasma 129:1–9. doi:10.1007/BF01282300 Spear-Bernstein L, Miller KR (1989) Unique location of the phycobiliprotein light-harvesting pigment in the cryptophyceae. J Phycol 25:412–419. doi:10.1111/j.1529-8817.1989.tb00245.x Ston J, Kosakowska A (2002) Phytoplankton pigments designation—an application of RP-HPLC in qualitative and quantitative analysis. J Appl Phycol 14:205–210. doi:10.1023/A:1019928411436 Sundström V, Pullerits T, van Grondelle R (1999) Photosynthetic light-harvesting: Reconciling dynamics and structure of purple bacterial LH2 reveals function of photosynthetic unit. J Phys Chem B 103:2327–2346. doi:10.1021/jp983722+ Swaminathan R, Hoang CP, Verkman AS (1997) Photobleaching recovery and anisotropy decay of green fluorescent protein GFP-S65T in solution and cells: cytoplasmic viscosity probed by green fluorescent protein translational and rotational diffusion. Biophys J 72:1900–1907. doi:10.1016/S0006-3495(97)78835-0 van Amerongen H, Valkunas L, van Grondelle R (2000) Photosynthetic excitons. World Scientific, Singapore van der Weij-De CD, Doust AB, van Stokkum IHM, Dekker JP, Wilk KE, Curmi PMG, Scholes GD, van Grondelle R (2006) How energy funnels from the phycoerythrin antenna complex to photosystem I and photosystem II in cryptophyte Rhodomonas CS24 cells. J Phys Chem B 110:25066–25073. doi:10.1021/jp061546w van Grondelle R (1985) Excitation energy transfer, trapping and annihilation in photosynthetic systems. Biochim Biophys Acta Rev Bioenerg 811:147–195. doi:10.1016/0304-4173(85)90017-5 Vesk M, Dwarte D, Fowler S, Hiller RG (1992) Freeze fracture immunocytochemistry of light-harvesting pigment complexes in a cryptophyte. Protoplasma 170:166–176. doi:10.1007/BF01378791 Wilk KE, Harrop SJ, Jankova L, Edler D, Keenan G, Sharples F, Hiller RG, Curmi PMG (1999) Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: crystal structure of a cryptophyte phycoerythrin at 1.63-angstrom resolution. Proc Natl Acad Sci USA 96:8901–8906. doi:10.1073/pnas.96.16.8901 Yang SZ, Su ZQ, Li H, Feng JJ, Xie J, Xia AD, Gong YD, Zhao JQ (2007) Demonstration of phycoblilsome mobility by the time- and space-correlated fluorescence imaging of a cyanobacterial cell. Biochim Biophys Acta-Bioenerg 1767:15–21 Yi ZW, Huang H, Kuang TY, Sui SF (2005) Three-dimensional architecture of phycobilisomes from Nostoc flagelliforme revealed by single particle electron microscopy. FEBS Lett 579(17):3569–3573. doi:10.1016/j.febslet.2005.05.033 Zhang F, Lee GM, Jacobson K (1993) Protein lateral mobility as a reflection of membrane microstructure. Bioessays 15:579–588. doi:10.1002/bies.950150903