Optimization of Combinatory Nicking Endonucleases for Accurate Identification of Nucleic Acids in Low Abundance

SLAS Technology - Tập 20 - Trang 411-417 - 2015
Miu-Ling Lam1,2, Bin Chen1, Ting-Hsuan Chen1,2,3
1School of Creative Media, City University of Hong Kong, Hong Kong
2Centre for Robotics and Automation, City University of Hong Kong
3Department of Mechanical and Biomedical Engineering, City University of Hong Kong, Hong Kong

Tài liệu tham khảo

Li, 2004, Salivary Transcriptome Diagnostics for Oral Cancer Detection, Clin. Cancer. Res., 10, 8442, 10.1158/1078-0432.CCR-04-1167 Mitchell, 2008, Circulating MicroRNAs as Stable Blood-Based Markers for Cancer Detection, Proc. Natl. Acad. Sci. U. S. A., 105, 10513, 10.1073/pnas.0804549105 Ho, 2005, Multiplexed Hybridization Detection with Multicolor Colocalization of Quantum Dot Nanoprobes, Nano Lett., 5, 1693, 10.1021/nl050888v Hsieh, 2012, Rapid, Sensitive, and Quantitative Detection of Pathogenic DNA at the Point of Care through Microfluidic Electrochemical Quantitative Loop-Mediated Isothermal Amplification, Angew. Chem., 51, 4896, 10.1002/anie.201109115 Sato, 2010, Simple PCR-Based DNA Microarray System to Identify Human Pathogenic Fungi in Skin, J. Clin. Microbiol., 48, 2357, 10.1128/JCM.02185-09 Lazcka, 2007, Pathogen Detection: A Perspective of Traditional Methods and Biosensors, Biosensors Bioelectron., 22, 1205, 10.1016/j.bios.2006.06.036 Fang, 1999, Designing a Novel Molecular Beacon for Surface-Immobilized DNA Hybridization Studies, J. Am. Chem. Soc., 121, 2921, 10.1021/ja9837809 Lander, 1999, Array of Hope, Nat. Genet., 21, 3, 10.1038/4427 Nygaard, 2009, Methods for Quantitation of Gene Expression, Front. Biosci., 14, 552, 10.2741/3262 Elghanian, 1997, Selective Colorimetric Detection of Polynucleotides Based on the Distance-Dependent Optical Properties of Gold Nanoparticles, Science, 277, 1078, 10.1126/science.277.5329.1078 Han, 2001, Quantum-Dot-Tagged Microbeads for Multiplexed Optical Coding of Biomolecules, Nat. Biotechnol., 19, 631, 10.1038/90228 Garcia, 2010, A Parametric Design Study of an Electrochemical Sensor, J. Lab. Autom., 15, 179, 10.1016/j.jala.2010.01.007 Kerman, 2004, Modification of Escherichia coli Single-Stranded DNA Binding Protein with Gold Nanoparticles for Electrochemical Detection of DNA Hybridization, Anal. Chim. Acta, 510, 169, 10.1016/j.aca.2003.12.067 Lord, 2009, Nanomaterials for Ultrasensitive Electrochemical Nucleic Acids Biosensing, J. Mater. Chem., 19, 3127, 10.1039/b814569e Maxam, 1977, A New Method for Sequencing DNA, Proc. Natl. Acad. Sci. U. S. A., 74, 560, 10.1073/pnas.74.2.560 Sanger, 1977, DNA Sequencing with Chain-Terminating Inhibitors, Proc. Natl. Acad. Sci. U. S. A., 74, 5463, 10.1073/pnas.74.12.5463 Mardis, 2008, Next-Generation DNA Sequencing Methods, Annu. Rev. Genom. Hum. Genet., 9, 387, 10.1146/annurev.genom.9.081307.164359 Margulies, 2005, Genome Sequencing in Microfabricated High-Density Picolitre Reactors, Nature, 437, 376, 10.1038/nature03959 Bentley, 2006, Whole-Genome Re-Sequencing, Curr. Opin. Genet. Dev., 16, 545, 10.1016/j.gde.2006.10.009 Valouev, 2008, A High-Resolution, Nucleosome Position Map of C. elegans Reveals a Lack of Universal Sequence-Dictated Positioning, Genome Res., 18, 1051, 10.1101/gr.076463.108 Reed, 2012, Identifying Individual DNA Species in a Complex Mixture by Precisely Measuring the Spacing between Nicking Restriction Enzymes with Atomic Force Microscope, J. R. Soc. Interface, 9, 2341, 10.1098/rsif.2012.0024 Nollau, 1997, Methods for Detection of Point Mutations: Performance and Quality Assessment, Clin. Chem., 43, 1114, 10.1093/clinchem/43.7.1114