Mẫu hình chuyển hóa liên quan đến nitơ của khả năng nhạy cảm với sự nhiễm bệnh của Botrytis cinerea trong thân cây cà chua (Solanum lycopersicum)
Tóm tắt
Từ khóa
Tài liệu tham khảo
Ai G, Zhu H, Fu X et al (2021) Phytophthora infection signals-induced translocation of NAC089 is required for endoplasmic reticulum stress response-mediated plant immunity. Plant J 108:67–80. https://doi.org/10.1111/tpj.15425
Allwood JW, Williams A, Uthe H et al (2021) Unravelling plant responses to stress—the importance of targeted and untargeted metabolomics. Metabolites. https://doi.org/10.3390/metabo11080558
Asselbergh B, Curvers K, França SC et al (2007) Resistance to Botrytis cinerea in sitiens, an abscisic acid-deficient tomato mutant, involves timely production of hydrogen peroxide and cell wall modifications in the epidermis. Plant Physiol 144:1863–1877. https://doi.org/10.1104/pp.107.099226
Aubert Y, Widemann E, Miesch L et al (2015) CYP94-mediated jasmonoyl-isoleucine hormone oxidation shapes jasmonate profiles and attenuates defence responses to Botrytis cinerea infection. J Exp Bot 66:3879–3892. https://doi.org/10.1093/jxb/erv190
Bauer S, Mekonnen DW, Geist B et al (2020) The isoleucic acid triad: distinct impacts on plant defense, root growth, and formation of reactive oxygen species. J Exp Bot 71:4258–4270. https://doi.org/10.1093/jxb/eraa160
Biais B, Bénard C, Beauvoit B et al (2014) Remarkable reproducibility of enzyme activity profiles in tomato fruits grown under contrasting environments provides a roadmap for studies of fruit metabolism. Plant Physiol 164:1204–1221. https://doi.org/10.1104/pp.113.231241
Bolton MD (2009) Primary metabolism and plant defense—fuel for the fire. Mol Plant-Microbe Interact 22:487–497. https://doi.org/10.1094/MPMI-22-5-0487
Camañes G, Scalschi L, Vicedo B et al (2015) An untargeted global metabolomic analysis reveals the biochemical changes underlying basal resistance and priming in Solanum lycopersicum, and identifies 1-methyltryptophan as a metabolite involved in plant responses to Botrytis cinerea and Pseudomonas syringae. Plant J 84:125–139. https://doi.org/10.1111/tpj.12964
Chen S, Fu Y, Peng X et al (2021) Trichoderma harzianum enhances resistance to Botrytis cinerea by promoting photosynthesis, redox homeostasis and secondary metabolites in tomato. SSRN. https://doi.org/10.2139/ssrn.3990631
Cho Y-H, Yoo S-D (2011) Signaling role of fructose mediated by FINS1/FBP in Arabidopsis thaliana. PLoS Genet 7:e1001263. https://doi.org/10.1371/journal.pgen.1001263
Choquer M, Fournier E, Kunz C et al (2007) Botrytis cinerea virulence factors: new insights into a necrotrophic and polyphageous pathogen. FEMS Microbiol Lett 277:1–10. https://doi.org/10.1111/j.1574-6968.2007.00930.x
Cramer MD, Hawkins HJ, Verboom GA (2009) The importance of nutritional regulation of plant water flux. Oecologia 161:15–24. https://doi.org/10.1007/s00442-009-1364-3
De Cremer K, Mathys J, Vos C et al (2013) RNAseq-based transcriptome analysis of Lactuca sativa infected by the fungal necrotroph Botrytis cinerea. Plant Cell Environ 36:1992–2007. https://doi.org/10.1111/pce.12106
Diab H, Limami AM (2016) Reconfiguration of N metabolism upon hypoxia stress and recovery: roles of alanine aminotransferase (AlaAt) and glutamate dehydrogenase (GDH). Plants 5:345–367. https://doi.org/10.3390/plants5020025
Donahue JL, Alford SR, Torabinejad J et al (2010) The Arabidopsis thaliana myo-inositol 1-phosphate synthase1 gene is required for myo-inositol synthesis and suppression of cell death. Plant Cell 22:888–903. https://doi.org/10.1105/tpc.109.071779
Dulermo T, Bligny R, Gout E, Cotton P (2009) Amino acid changes during sunflower infection by the necrotrophic fungus B. cinerea. Plant Signal Behav 4:859–861. https://doi.org/10.4161/psb.4.9.9397
Dumont D, Danielato G, Chastellier A et al (2020) Multi-targeted metabolic profiling of carotenoids, phenolic compounds and primary metabolites in goji (Lycium spp.) berry and tomato (Solanum lycopersicum) reveals inter and intra genus biomarkers. Metabolites 10:1–17. https://doi.org/10.3390/metabo10100422
Edlich W, Lorenz G, Lyr H et al (1989) New aspects on the infection mechanism of Botrytis cinerea Pers. Netherlands J Plant Pathol 95:53–62. https://doi.org/10.1007/BF01974284
Fagard M, Launay A, Clément G et al (2014) Nitrogen metabolism meets phytopathology. J Exp Bot 65:5643–5656. https://doi.org/10.1093/jxb/eru323
Feussner I, Polle A (2015) What the transcriptome does not tell—proteomics and metabolomics are closer to the plants’ patho-phenotype. Curr Opin Plant Biol 26:26–31. https://doi.org/10.1016/j.pbi.2015.05.023
Formela-Luboińska M, Chadzinikolau T, Drzewiecka K et al (2020) The role of sugars in the regulation of the level of endogenous signaling molecules during defense response of yellow lupine to Fusarium oxysporum. Int J Mol Sci 21:4133. https://doi.org/10.3390/ijms21114133
Friedman M (2002) Tomato glycoalkaloids: role in the plant and in the diet. J Agric Food Chem 50:5751–5780. https://doi.org/10.1021/jf020560c
Gao P, Zhang H, Yan H et al (2021) RcTGA1 and glucosinolate biosynthesis pathway involvement in the defence of rose against the necrotrophic fungus Botrytis cinerea. BMC Plant Biol 21:1–17. https://doi.org/10.1186/s12870-021-02973-z
Gaufichon L, Reisdorf-Cren M, Rothstein SJ et al (2010) Biological functions of asparagine synthetase in plants. Plant Sci 179:141–153. https://doi.org/10.1016/j.plantsci.2010.04.010
Griebel T, Zeier J (2010) A role for β-sitosterol to stigmasterol conversion in plant-pathogen interactions. Plant J 63:254–268. https://doi.org/10.1111/j.1365-313X.2010.04235.x
Gu Z, Eils R, Schlesner M (2016) Complex heatmaps reveal patterns and correlations in multidimensional genomic data. Bioinformatics 32:2847–2849. https://doi.org/10.1093/bioinformatics/btw313
Heil M, Baldwin IT (2002) Fitness costs of induced resistance: emerging experimental support for a slippery concept. Trends Plant Sci 7:61–67. https://doi.org/10.1016/S1360-1385(01)02186-0
Hoffland E, Van Beusichem ML, Jeger MJ (1999) Nitrogen availability and susceptibility of tomato leaves to Botrytis cinerea. Plant Soil 210:263–272. https://doi.org/10.1023/A:1004661913224
Holz G, Coertze S, Williamson B (2007) The ecology of Botrytis on plant surfaces. Botrytis Biol Pathol Control. https://doi.org/10.1007/978-1-4020-2626-3_2
Hong Y-S, Martinez A, Liger-Belair G et al (2012) Metabolomics reveals simultaneous influences of plant defence system and fungal growth in Botrytis cinerea-infected Vitis vinifera cv. Chardonnay berries. J Exp Bot 63:5773–5785. https://doi.org/10.1093/jxb/ers228
Kanazawa J, Kakisaka K, Suzuki Y et al (2022) Excess fructose enhances oleatic cytotoxicity via reactive oxygen species production and causes necroptosis in hepatocytes. J Nutr Biochem 107:109052. https://doi.org/10.1016/j.jnutbio.2022.109052
Kim MS, Cho SM, Kang EY et al (2008) Galactinol is a signaling component of the induced systemic resistance caused by Pseudomonas chlororaphis O6 root colonization. Mol Plant-Microbe Interact 21:1643–1653. https://doi.org/10.1094/MPMI-21-12-1643
Kim DS, Na H, Kwack Y, Chun C (2014) Secondary metabolite profiling in various parts of tomato plants. Korean J Hortic Sci Technol 32:252–260. https://doi.org/10.7235/hort.2014.13165
Kuźniak E, Sklodowska M (1999) The effect of Botrytis cinerea infection on ascorbate-glutathione cycle in tomato leaves. Plant Sci 148:69–76. https://doi.org/10.1016/S0168-9452(99)00121-1
Lacrampe N, Lopez-Lauri F, Lugan R et al (2021) Regulation of sugar metabolism genes in the nitrogen-dependent susceptibility of tomato stems to Botrytis cinerea. Ann Bot 127:143–154. https://doi.org/10.1093/aob/mcaa155
Larbat R, Le Bot J, Bourgaud F et al (2012) Organ-specific responses of tomato growth and phenolic metabolism to nitrate limitation. Plant Biol 14:760–769. https://doi.org/10.1111/j.1438-8677.2012.00564.x
Lecompte F, Abro MA, Nicot PC (2010) Contrasted responses of Botrytis cinerea isolates developing on tomato plants grown under different nitrogen nutrition regimes. Plant Pathol 59:891–899. https://doi.org/10.1111/j.1365-3059.2010.02320.x
Lecompte F, Abro MA, Nicot PC (2013) Can plant sugars mediate the effect of nitrogen fertilization on lettuce susceptibility to two necrotrophic pathogens: Botrytis cinerea and Sclerotinia sclerotiorum? Plant Soil 369:387–401. https://doi.org/10.1007/s11104-012-1577-9
Lecompte F, Nicot PC, Ripoll J et al (2017) Reduced susceptibility of tomato stem to the necrotrophic fungus Botrytis cinerea is associated with a specific adjustment of fructose content in the host sugar pool. Ann Bot 119:931–943. https://doi.org/10.1093/aob/mcw240
Li P, Wind JJ, Shi X et al (2011) Fructose sensitivity is suppressed in Arabidopsis by the transcription factor ANAC089 lacking the membrane-bound domain. PNAS 108:3436–3441. https://doi.org/10.1073/pnas.1018665108
Li X, Zhang Y, Huang L et al (2014) Tomato SlMKK2 and SlMKK4 contribute to disease resistance against Botrytis cinerea. BMC Plant Biol 14:1–17. https://doi.org/10.1186/1471-2229-14-166
Li L, Dou N, Zhang H, Wu C (2021) The versatile GABA in plants. Plant Signal Behav. https://doi.org/10.1080/15592324.2020.1862565
Limami AM, Glévarec G, Ricoult C et al (2008) Concerted modulation of alanine and glutamate metabolism in young Medicago truncatula seedlings under hypoxic stress. J Exp Bot 59:2325–2335. https://doi.org/10.1093/jxb/ern102
Lionetti V, Fabri E, De Caroli M et al (2017) Three pectin methylesterase inhibitors protect cell wall integrity for arabidopsis immunity to Botrytis. Plant Physiol 173:1844–1863. https://doi.org/10.1104/pp.16.01185
Løvdal T, Olsen KM, Slimestad R et al (2010) Synergetic effects of nitrogen depletion, temperature, and light on the content of phenolic compounds and gene expression in leaves of tomato. Phytochemistry 71:605–613. https://doi.org/10.1016/j.phytochem.2009.12.014
Marina M, Maiale SJ, Rossi FR et al (2008) Apoplastic polyamine oxidation plays different roles in local responses of tobacco to infection by the necrotrophic fungus Sclerotinia sclerotiorum and the biotrophic bacterium Pseudomonas viridiflava. Plant Physiol 147:2164–2178. https://doi.org/10.1104/pp.108.122614
Martínez G, Regente M, Jacobi S et al (2017) Chlorogenic acid is a fungicide active against phytopathogenic fungi. Pestic Biochem Physiol 140:30–35. https://doi.org/10.1016/j.pestbp.2017.05.012
Massot C, Bancel D, Lauri FL et al (2013) High temperature inhibits ascorbate recycling and light stimulation of the ascorbate pool in tomato despite increased expression of biosynthesis genes. PLoS ONE 8:1–13. https://doi.org/10.1371/journal.pone.0084474
Meng PH, Raynaud C, Tcherkez G et al (2009) Crosstalks between myo-inositol metabolism, programmed cell death and basal immunity in Arabidopsis. PLoS ONE. https://doi.org/10.1371/journal.pone.0007364
Meyer RC, Steinfath M, Lisec J et al (2007) The metabolic signature related to high plant growth rate in Arabidopsis thaliana. PNAS USA 104:4759–4764. https://doi.org/10.1073/pnas.0609709104
Mhlongo MI, Piater LA, Steenkamp PA et al (2020) Metabolic profiling of PGPR-treated tomato plants reveal priming-related adaptations of secondary metabolites and aromatic amino acids. Metabolites 10:210. https://doi.org/10.3390/metabo10050210
Mitchell HJ, Hall JL, Barber MS (1994) Elicitor-induced cinnamyl alcohol dehydrogenase activity in lignifying wheat (Triticum aestivum L.) leaves. Plant Physiol 104:551–556. https://doi.org/10.1104/pp.104.2.551
Miyashita Y, Dolferus R, Ismond KP, Good AG (2007) Alanine aminotransferase catalyses the breakdown of alanine after hypoxia in Arabidopsis thaliana. Plant J 49:1108–1121. https://doi.org/10.1111/j.1365-313X.2006.03023.x
Nambeesan S, AbuQamar S, Laluk K et al (2012) Polyamines attenuate ethylene-mediated defense responses to abrogate resistance to Botrytis cinerea in tomato. Plant Physiol 158:1034–1045. https://doi.org/10.1104/pp.111.188698
Nicot P, Bardin M, Debruyne F et al (2013) Effect of nitrogen fertilisation of strawberry plants on the efficacy of defence-stimulating biocontrol products against Botrytis cinerea. IOBC-WPRS Bull 88:39–42
Nishizawa A, Yabuta Y, Shigeoka S (2008) Galactinol and raffinose constitute a novel function to protect plants from oxidative damage. Plant Physiol 147:1251–1263. https://doi.org/10.1104/pp.108.122465
Nishizawa-Yokoi A, Yabuta Y, Shigeoka S (2008) The contribution of carbohydrates including raffinose family oligosaccharides and sugar alcohols to protection of plant cells from oxidative damage. Plant Signal Behav 3:1016–1018. https://doi.org/10.4161/psb.6738
Pitsili E, Phukan UJ, Coll NS (2020) Cell death in plant immunity. Cold Spring Harb Perspect Biol. https://doi.org/10.1101/cshperspect.a036483
Quidde T, Osbourn AE, Tudzynski P (1998) Detoxification of α-tomatine by Botrytis cinerea. Physiol Mol Plant Pathol 52:151–165. https://doi.org/10.1006/pmpp.1998.0142
Renard CMGC, Voragen AGJ, Thibault JF, Pilnik W (1990) Studies on apple protopectin: I. Extraction of insoluble pectin by chemical means. Carbohydr Polym 12:9–25. https://doi.org/10.1016/0144-8617(90)90101-W
Renau-Morata B, Molina RV, Minguet EG et al (2021) Integrative transcriptomic and metabolomic analysis at organ scale reveals gene modules involved in the responses to suboptimal nitrogen supply in tomato. Agronomy. https://doi.org/10.3390/agronomy11071320
Rossi FR, Krapp AR, Bisaro F et al (2017) Reactive oxygen species generated in chloroplasts contribute to tobacco leaf infection by the necrotrophic fungus Botrytis cinerea. Plant J 92:761–773. https://doi.org/10.1111/tpj.13718
Sandrock RW, VanEtten HD (1998) Fungal sensitivity to and enzymatic degradation of the phytoanticipin α-tomatine. Phytopathology 88:137–143. https://doi.org/10.1094/PHYTO.1998.88.2.137
Scheible WR, Krapp A, Stitt M (2000) Reciprocal diurnal changes of phosphoenolpyruvate carboxylase expression and cytosolic pyruvate kinase, citrate synthase and NADP-isocitrate dehydrogenase expression regulate organic acid metabolism during nitrate assimilation in tobacco leaves. Plant Cell Environ 23:1155–1167. https://doi.org/10.1046/j.1365-3040.2000.00634.x
Seifi HS, Curvers K, De Vleesschauwer D et al (2013) Concurrent overactivation of the cytosolic glutamine synthetase and the GABA shunt in the ABA-deficient sitiens mutant of tomato leads to resistance against Botrytis cinerea. New Phytologist 199:490–504. https://doi.org/10.1111/nph.12283
Seifi HS, De Vleesschauwer D, Aziz A, Höfte M (2014) Modulating plant primary amino acid metabolism as a necrotrophic virulence strategy. Plant Signal Behav 9:e27995. https://doi.org/10.4161/psb.27995
Sérino S, Costagliola G, Gomez L (2019) Lyophilized tomato plant material: validation of a reliable extraction method for the analysis of vitamin C. J Food Compos Anal 81:37–45. https://doi.org/10.1016/j.jfca.2019.05.001
Simon UK, Polanschütz LM, Koffler BE, Zechmann B (2013) High resolution imaging of temporal and spatial changes of subcellular ascorbate, glutathione and H2O2 distribution during Botrytis cinerea infection in Arabidopsis. PLoS ONE 8:e65811. https://doi.org/10.1371/journal.pone.0065811
Sivakumaran A, Akinyemi A, Mandon J et al (2016) ABA suppresses Botrytis cinerea elicited NO production in tomato to influence H2O2 generation and increase host susceptibility. Front Plant Sci 7:1–12. https://doi.org/10.3389/fpls.2016.00709
Sonawane PD, Pollier J, Panda S et al (2016) Plant cholesterol biosynthetic pathway overlaps with phytosterol metabolism. Nat Plants. https://doi.org/10.1038/nplants.2016.205
Soulie MC, Koka SM, Floch K et al (2020) Plant nitrogen supply affects the Botrytis cinerea infection process and modulates known and novel virulence factors. Mol Plant Pathol 21:1436–1450. https://doi.org/10.1111/mpp.12984
Stare T, Stare K, Weckwerth W et al (2017) Comparison between proteome and transcriptome response in potato (Solanum tuberosum L.) leaves following potato virus Y (PVY) infection. Proteomes 5:14. https://doi.org/10.3390/proteomes5030014
Strack D, Gross W, Wray V, Grotjahn L (1987) Enzymic synthesis of caffeoylglucaric acid from chlorogenic acid and glucaric acid by a protein preparation from tomato cotyledons. Plant Physiol 83:475–478. https://doi.org/10.1104/pp.83.3.475
Sugimoto N, Engelgau P, Daniel Jones A et al (2021) Citramalate synthase yields a biosynthetic pathway for isoleucine and straight- and branched-chain ester formation in ripening apple fruit. PNAS USA. https://doi.org/10.1073/pnas.2009988118
Sumner LW, Amberg A, Barrett D et al (2007) Proposed minimum reporting standards for chemical analysis. Metabolomics 3:211–221. https://doi.org/10.1007/s11306-007-0082-2
Tang H, Bi H, Liu B et al (2021) WRKY33 interacts with WRKY12 protein to up-regulate RAP2.2 during submergence induced hypoxia response in Arabidopsis thaliana. New Phytol 229:106–125. https://doi.org/10.1111/nph.17020
Thévenot EA, Roux A, Xu Y et al (2015) Analysis of the human adult urinary metabolome variations with age, body mass index, and gender by implementing a comprehensive workflow for univariate and OPLS statistical analyses. J Proteome Res 14:3322–3335. https://doi.org/10.1021/acs.jproteome.5b00354
Tyerman SD, Wignes JA, Kaiser BN (2017) Root hydraulic and aquaporin responses to N availability. Signal Commun Plants. https://doi.org/10.1007/978-3-319-49395-4_10
Urbanczyk-Wochniak E, Fernie AR (2005) Metabolic profiling reveals altered nitrogen nutrient regimes have diverse effects on the metabolism of hydroponically-grown tomato (Solanum lycopersicum) plants. J Exp Bot 56:309–321. https://doi.org/10.1093/jxb/eri059
Valeri MC, Novi G, Weits DA et al (2021) Botrytis cinerea induces local hypoxia in Arabidopsis leaves. New Phytol 229:173–185. https://doi.org/10.1111/nph.16513
Van Baarlen P, Woltering EJ, Staats M, Van Kan JAL (2007) Histochemical and genetic analysis of host and non-host interactions of Arabidopsis with three Botrytis species: an important role for cell death control. Mol Plant Pathol 8:41–54. https://doi.org/10.1111/j.1364-3703.2006.00367.x
van Rensburg HCJ, Van den Ende W (2020) Priming with γ-aminobutyric acid against Botrytis cinerea reshuffles metabolism and reactive oxygen species: dissecting signalling and metabolism. Antioxidants 9:1–22. https://doi.org/10.3390/antiox9121174
van Rensburg HCJ, Limami AM, Van den Ende W (2021) Spermine and spermidine priming against Botrytis cinerea modulates ros dynamics and metabolism in Arabidopsis. Biomolecules 11:1–25. https://doi.org/10.3390/biom11020223
Vega A, Canessa P, Hoppe G et al (2015) Transcriptome analysis reveals regulatory networks underlying differential susceptibility to Botrytis cinerea in response to nitrogen availability in Solanum lycopersicum. Front Plant Sci 6:1–17. https://doi.org/10.3389/fpls.2015.00911
Wang W, Yang X, Tangchaiburana S et al (2008) An inositolphosphorylceramide synthase is involved in regulation of plant programmed cell death associated with defense in Arabidopsis. Plant Cell 20:3163–3179. https://doi.org/10.1105/tpc.108.060053
Wang K, Senthil-Kumar M, Ryu CM et al(2012) Phytosterols play a key role in plant innate immunity against bacterial pathogens by regulating nutrient efflux into the apoplast. Plant Physiol 158:1789–1802. https://doi.org/10.1104/pp.111.189217
Windram O, Madhou P, Mchattie S et al (2012) Arabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis. Plant Cell 24:3530–3557. https://doi.org/10.1105/tpc.112.102046
Yang Z-T, Wang M-J, Sun L et al (2014) The membrane-associated transcription factor NAC089 controls ER-stress-induced programmed cell death in plants. PLoS Genet 10:e1004243. https://doi.org/10.1371/journal.pgen.1004243
Yang J, Sun C, Zhang Y et al (2017) Induced resistance in tomato fruit by γ-aminobutyric acid for the control of alternaria rot caused by Alternaria alternata. Food Chem 221:1014–1020. https://doi.org/10.1016/j.foodchem.2016.11.061
Zhao Y, Wei T, Yin KQ et al (2012) Arabidopsis RAP2.2 plays an important role in plant resistance to Botrytis cinerea and ethylene responses. New Phytol 195:450–460. https://doi.org/10.1111/j.1469-8137.2012.04160.x