Machine Learning Approaches for the Estimation of Biological Aging: The Road Ahead for Population Studies

Alessandro Gialluisi1, Augusto Di Castelnuovo2, Maria Benedetta Donati1, Giovanni de Gaetano1, Licia Iacoviello1,3
1Department of Epidemiology and Prevention, IRCCS NEUROMED, Italy
2Mediterranea Cardiocentro, Italy
3Department of Medicine and Surgery, University of Insubria, Italy

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Cohen, 2003, Human population: the next half century, Science., 302, 1172, 10.1126/science.1088665

Mamoshina, 2018, Population specific biomarkers of human aging: a big data study using South Korean, Canadian and Eastern European patient populations, J Gerontol Ser A., 1, 10.1093/gerona/gly005

Cole, 2017, Predicting age using neuroimaging: innovative brain ageing biomarkers, Trends Neurosci., 40, 681, 10.1016/j.tins.2017.10.001

Cosco, 2017, Healthy ageing, resilience and wellbeing, Epidemiol Psychiatr Sci., 26, 579, 10.1017/S2045796017000324

Cole, 2018, Brain age predicts mortality, Mol Psychiatr., 23, 1385, 10.1038/mp.2017.62

Cole, 2018, Brain age and other bodily ‘ages': implications for neuropsychiatry, Mol Psychiatr., 24, 266, 10.1038/s41380-018-0098-1

Di Giuseppe, 2012, Total dietary antioxidant capacity and lung function in an Italian population: a favorable role in premenopausal/never smoker women, Eur J Clin Nutr., 66, 61, 10.1038/ejcn.2011.148

Yamaguchi, 2012, Novel regression equations predicting lung age from varied spirometric parameters, Respir Physiol Neurobiol., 183, 108, 10.1016/j.resp.2012.06.025

Russoniello, 2013, Heart rate variability and biological age: implications for health and gaming, Cyberpsychol Behav Soc Netw., 16, 302, 10.1089/cyber.2013.1505

Klemera, 2006, A new approach to the concept and computation of biological age, Mech Ageing Dev., 127, 240, 10.1016/j.mad.2005.10.004

Blackburn, 2015, Human telomere biology: a contributory and interactive factor in aging, disease risks, and protection, Science., 350, 1193, 10.1126/science.aab3389

Peters, 2015, The transcriptional landscape of age in human peripheral blood, Nat Commun., 6, 8570, 10.1038/ncomms9570

Holly, 2013, Towards a gene expression biomarker set for human biological age, Aging Cell., 12, 324, 10.1111/acel.12044

Hannum, 2013, Genome-wide methylation profiles reveal quantitative views of human aging rates, Mol Cell., 49, 359, 10.1016/j.molcel.2012.10.016

Horvath, 2013, DNA methylation age of human tissues and cell types, Genome Biol., 14, R115, 10.1186/gb-2013-14-10-r115

Fabris, 2017, A review of supervised machine learning applied to ageing research, Biogerontology., 18, 171, 10.1007/s10522-017-9683-y

Iacoviello, 2007, The Moli-Sani Project, a randomized, prospective cohort study in the Molise region in Italy; design, rationale and objectives, Ital J Public Health., 4, 110, 10.2427/5886

Sebastiani, 2017, Biomarker signatures of aging, Aging Cell., 16, 329, 10.1111/acel.12557

Murabito, 2018, Measures of biologic age in a community sample predict mortality and age-related disease: the framingham offspring study, JGerontol Ser A Biol Sci Med Sci., 73, 757, 10.1093/gerona/glx144

Putin, 2016, Deep biomarkers of human aging : application of deep neural networks to biomarker development, Aging (Albany NY), 8, 1021, 10.18632/aging.100968

Ching, 2018, Opportunities and obstacles for deep learning in biology and medicine, J R Soc Interface., 15, 20170387, 10.1098/rsif.2017.0387

Mamoshina, 2016, Applications of deep learning in biomedicine, Mol Pharm., 13, 1445, 10.1021/acs.molpharmaceut.5b00982

Cole, 2017, Predicting brain age with deep learning from raw imaging data results in a reliable and heritable biomarker, Neuroimage., 163, 115, 10.1016/j.neuroimage.2017.07.059

Mamoshina, 2019, Blood biochemistry analysis to detect smoking status and quantify accelerated aging in smokers, Sci Rep., 15, 142, 10.1038/s41598-018-35704-w

Liem, 2017, Predicting brain-age from multimodal imaging data captures cognitive impairment, Neuroimage., 148, 179, 10.1016/j.neuroimage.2016.11.005

Franke, 2010, Estimating the age of healthy subjects from T1-weighted MRI scans using kernel methods: exploring the influence of various parameters, Neuroimage., 50, 883, 10.1016/j.neuroimage.2010.01.005

Cole, 2015, Prediction of brain age suggests accelerated atrophy after traumatic brain injury, Ann Neurol., 77, 571, 10.1002/ana.24367

Cole, 2017, Brain-predicted age in down syndrome is associated with beta amyloid deposition and cognitive decline, Neurobiol Aging., 56, 41, 10.1016/j.neurobiolaging.2017.04.006

Valizadeh, 2017, Age prediction on the basis of brain anatomical measures, Hum Brain Mapp., 38, 997, 10.1002/hbm.23434

Franke, 2012, Longitudinal changes in individual BrainAGE in healthy aging, mild cognitive impairment, and alzheimer's disease 1 data used in preparation of this article were obtained from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database adni, GeroPsych., 25, 235, 10.1024/1662-9647/a000074

Cole, 2018, Spatial patterns of progressive brain volume loss after moderate-severe traumatic brain injury, Brain., 141, 822, 10.1093/brain/awx354

Cole, 2017, Increased brain-predicted aging in treated HIV disease, Neurology., 88, 1349, 10.1212/WNL.0000000000003790

Cole, 2018, Neuroimaging studies illustrate the commonalities between ageing and brain diseases, BioEssays., 40, 1700221, 10.1002/bies.201700221

Jansen, 2015, What twin studies tell us about the heritability of brain development, morphology, and function: a review, Neuropsychol Rev., 25, 27, 10.1007/s11065-015-9278-9

Mosconi, 2018, Lifestyle and vascular risk effects on MRI-based biomarkers of Alzheimer's disease: a cross-sectional study of middle-aged adults from the broader New York City area, BMJ Open., 8, e019362, 10.1136/bmjopen-2017-019362

Mosconi, 2015, Let food be thy medicine: diet, nutrition, and biomarkers' risk of alzheimer's disease, Curr Nutr Rep., 4, 126, 10.1007/s13668-014-0111-5

Staubo, 2017, Mediterranean diet, micronutrients and macronutrients, and MRI measures of cortical thickness, Alzheimer's Dement., 13, 168, 10.1016/j.jalz.2016.06.2359

Luciano, 2017, Mediterranean-Type diet and brain structural change from 73 to 76 years in a Scottish cohort, Neurology., 88, 449, 10.1212/WNL.0000000000003559

Gu, 2015, Mediterranean diet and brain structure in a multiethnic elderly cohort, Neurology., 85, 1744, 10.1212/WNL.0000000000002121

Steffener, 2016, Differences between chronological and brain age are related to education and self-reported physical activity, Neurobiol Aging., 40, 138, 10.1016/j.neurobiolaging.2016.01.014

Luders, 2016, Estimating brain age using high-resolution pattern recognition: younger brains in long-term meditation practitioners, Neuroimage., 134, 508, 10.1016/j.neuroimage.2016.04.007

Rogenmoser, 2018, Keeping brains young with making music, Brain Struct Funct., 223, 297, 10.1007/s00429-017-1491-2

Franke, 2017, Premature brain aging in baboons resulting from moderate fetal undernutrition, Front Aging Neurosci., 9, 92, 10.3389/fnagi.2017.00092

Hatton, 2018, Negative fateful life events in midlife and advanced predicted brain aging, Neurobiol Aging., 67, 1, 10.1016/j.neurobiolaging.2018.03.004

Pardoe, 2017, Structural brain changes in medically refractory focal epilepsy resemble premature brain aging, Epilepsy Res., 133, 28, 10.1016/j.eplepsyres.2017.03.007

Gaser, 2013, BrainAGE in mild cognitive impaired patients: predicting the conversion to alzheimer's disease, PLoS ONE., 8, e67346, 10.1371/journal.pone.0067346

Löwe, 2016, The effect of the APOE genotype on individual BrainAGE in normal aging, Mild cognitive impairment, and Alzheimer's Disease, PLoS ONE., 11, e0157514, 10.1371/journal.pone.0157514

Franceschi, 2018, The continuum of aging and age-related diseases: common mechanisms but different rates, Front Med., 5, 61, 10.3389/fmed.2018.00061

Joshi, 2017, Genome-wide meta-analysis associates HLA-DQA1/DRB1 and LPA and lifestyle factors with human longevity, Nat Commun., 8, 910, 10.1038/s41467-017-00934-5