Identification and validation of genomic regions that affect shoot fly resistance in sorghum [Sorghum bicolor (L.) Moench]
Tóm tắt
Từ khóa
Tài liệu tham khảo
Agarwal BL, Abraham CV (1985) Breeding sorghum for resistance to shoot fly and midge. In: Proceedings of the international sorghum entomology workshop, Texas A&M University, College Station, Texas, USA, 15–21 July 1984. International Crops Research Institute for the Semi-Arid Tropics, Patancheru 502324, Andhra Pradesh, India, pp 371–383
Agarwal BL, House LR (1982) Breeding for pest resistance in sorghum. In: Sorghum in eighties, Proceedings of the International symposium on sorghum, 2–7 November 1981. International Crops Research Institute for the Semi-Arid Tropics, Patancheru 502324, Andhra Pradesh, India, pp 435–446
Agrama HA, Widle GE, Reeses JC, Campbell LR, Tuinstra MR (2002) Genetic mapping of QTL associated with green bug resistance and tolerance in Sorghum bicolor. Theor Appl Genet 104:1373–1378
Alonso JM, Hirayama T, Roman G, Nourizadeh S, Ecker JR (1999) EIN 2, a bifunctional transducer of Ethylene and stress responases in Arabidopsis. Science 284:2148–2152
Anandan A, Huliraj H, Veerabadhiran P (2009) Analysis of resistance mechanism to Atherigona soccata in crosses of sorghum. Plant Breed 128:443–450
Aruna C, Bhagwat VR, Sharma V, Hussain T, Ghorade RB, Khandalkar HG, Audilakshmi S, Seetharama N (2011) Genotype × environment interactions for shoot fly resistance in sorghum (Sorghum bicolor (L.) Moench): response of recombinant inbred lines. Crop prot (Accepted)
Aruna C, Padmaja PG (2009) Evaluation of genetic potential of shoot fly resistant sources in sorghum (Sorghum bicolor (L.)). J Agri Sci 147:71–80
Audilakshmi S, Stenhouse JW, Reddy TP (2000) Genetic analysis of grain mould resistance in coloured sorghum genotypes. Euphytica 116:95–103
Aubert G, Morin J, Jacquin F, Loridon K, Quillet MC, Petit A, Rameau C, Lejeune-He’naut I, Huguet T, Burstin J (2006) Functional mapping in pea, as an aid to the candidate gene selection and for investigating synteny with the model legume Medicago truncatula. Theor Appl Genet 112:1024–1041
Belkhadir Y, Subramanian R, Dangi J (2004) Plant disease resistance protein signaling: NBS-LRR protein and their parameters. Curr Opin Plant Boil 7:391–399
Brooks TD, Willcox MC, Williams WP, Luthe DS (2004) Quantitative trait loci conferring resistance to fall Army worm and southern corn borer leaf feeding damage. Crop Sci 45:2430–2434
Chen M, Wang QY, Cheng XG, Xu ZS, Li LC, Ye X, Xia L, Ma Y (2006a) Gm DREB2, a soybean DRE binding transcription factor, conferred drought and high salt tolerance in transgenic plants. Biochem Biophys Res Comm 353:299–305
Chen X, Shang J, Chen D, Lei C, Zou Y, Zhai W, Liu G, Xu J, Ling Z, Cao G, Ma B, Wang Y, Zhao X, Li S, Zhu L (2006b) AB-lectin receptor kinase gene conferring rice blast resistance. Plant J 46:794–804
Cosio C, Dunand C (2009) Specific functions of individual class III peroxidase genes. J Expt Bot 60:391–408
Datta K, Velazhahan R, Oliva N, Ona I, Mew T, Khush GS, MuthuKrishnan S, Datta SK (1998) Over expression of the cloned rice thaumatin like protein (PR-5) gene in transgenic rice plants enhances environmental friendly resistance to Rhizoctonia solani causing sheath blight disease. Theo Appl Genet 98:1138–1145
Deeming JC (1971) Some species of Atherigona rondani (Diptera: Muscidae) from northern Nigeria, with special reference to those injurious to cereal crops. Bull Entomol Res 61:133–190
Deu M, Ratnadass A, Hamada MA, Noyer JL, Diabate M, Chantereau J (2005) Quantitative trait loci for head-bug resistance in sorghum. African J Biotech 4:247–250
Dhillon MK, Sharma HC, Reddy BVS, Ram S, Naresh JS, Kaizhu (2005) Relative susceptibility of different male-sterile cytoplasms in sorghum to shoot fly, Atherigona soccata. Euphytica 144:275–283
Dhillon MK, Sharma HC, Reddy BVS, Ram-Singh, Naresh JS (2006) Inheritance of resistance to sorghum shoot fly, Atherigona soccata. Crop Sci 46:1377–1383
Dilworth ES, Beese S, Paris R, Belfanti E, Tartarini S, Sansavini S, Patocchi A, Gessler C (2005) Identification of functional apple scab resistance gene promoters. Theor Appl Genet 110:1119–1126
Duval M, Hsieh TF, Kim SY, Thomas TL (2002) Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily. Plant Mol Biol 50:237–248
Eulgem T, Rushton PJ, Robartzek S, Somssich IE (2000) The WRKY super family of plant transcription factors. Trends Plant Sci 5:199–206
Falconer DS (1989) Introduction to quantitative genetics. Wiley, New York
Faris JD, Haen KM, Gill BS (2000) Saturation mapping of a gene-rich recombination hot spot region in wheat. Genetics 154:823–835
Fritz AK, Caldwell S, Worral WD (1999) Molecular mapping of Russsian wheat aphid resistance from triticale accession, PI 386156. Crop Sci 39:1707–1710
Gibson PT, Maiti RK (1983) Trichomes in segregating generations of sorghum matings. I. Inheritance of presence and density. Crop Sci 23:73–75
Haussmann BIG, Mahalakshmi V, Reddy BVS, Seetharama N, Hash CT, Geiger HH (2002) QTL mapping of stay-green in two sorghum recombinant inbred populations. Theor Appl Genet 106:133–142
Hulbert SH, Webb CA, Smith SM, Sun Q (2001) Resistance gene complexes: evolution and utilization. Annu Rev Phytopathol 39:285–312
Jadhav SS, Mote UN, Bapat DR (1986) Biophysical plant characters contributing to shoot fly resistance. Sorghum Newsletter 29:70
Jansen RC, Stam P (1994) High resolution of quantitative traits into multiple loci via interval mapping. Genetics 136:1447–1455
Jayanthi PDK, Reddy BVS, Gour TB, Reddy DDR (2002) Early seedling vigour in sorghum and its relationship with resistance to shoot fly Atherigona soccata (Rond). J Entomological Res 26:93–100
Jotwani MG (1982) Factors reducing sorghum yields-insect pests. In: Sorghum in Eighties. Proceedings International Symposium on sorghum. 2–7 Nov. 1981. ICRISAT, Patancheru, pp 251–255
Jotwani MG, Marawaha KK, Srivastava KM, Young WR (1970) Seasonal incidence of shoot fly (Atherigona soccata Rond.) in jowar hybrids at Delhi. Indian J Ento 32:7–15
Kamatar MY, Salimath PM (2003) Morphological traits of sorghum associated with resistance to shoot fly, Atherigona soccata Rondani. Indian J Plant Prot 31:73–77
Kim JS, Klein PE, Klein RR, Price HJ, Mullet JE, Stelly DM (2005) Chromosome identification and nomenclature of Sorghum bicolor. Genetics 169:1169–1173
Knoll J, Ejeta G (2008) Marker-assisted selection for early-season cold tolerance in sorghum: QTL validation across populations and environments. Theor Appl Genet 116:541–553
Knoll J, Gunaratna N, Ejeta G (2008) QTL analysis of early season cold tolerance in sorghum. Theor Appl Genet 116:577–587
Khurana AD, Verma AN (1985) Some physical plant characters in relation to stemborer and shoot fly resistance in sorghum. Indian J Entom 47:14–19
Kulaeva ON, Prokoptseva OS (2004) Recent advances in the study of mechanism of action of phytohormones. Biochem Mosc 69:233–247
Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits by using RFLP linkage maps. Genetics 121:1447–1455
Maiti RK, Bidinger FR (1979) A simple approach to identification of shoot fly tolerance in sorghum. Indian J Plant Prot 7:135–140
Maiti RK, Gibson PT (1983) Trichomes in segregating generations of sorghum matings. II. Association with shoot fly resistance. Crop Sci 23:76–79
Maiti RK, Prasada Rao KE, Raju PS, House LR (1984) The glossy trait in sorghum: its characteristics and significance in crop improvement. Field Crops Res 9:279–289
Mathews BF, Devine TE, Weisemann JM, Beard HS, Lewers KS, McDonald MH, Park Y-B, Maiti R, Lin J-J, Kuo J, Pedroni MJ, Cregan PB, Saunders JA (2001) Incorporation of sequenced cDNA and genomic markers into the soybean genetic map. Crop Sci 41:516–521
Munro AW, Girvan HM, McLean KJ (2007) Cytochrome P450-redox partner fusion enzymes. Biochim Biophys Acta 1770:345–359
Mote UN, Kadam JR, Bapat DR (1986) Antibiosis mechanisms of resistance to sorghum shoot fly. J Maharashtra Agric Univ 11:43–46
Nagaraj N, Reese JC, Tuinstra MR, Smith CM, Amand PS, Kirkham MB, Kofoid KD, Campbell LR, Wild GE (2005) Molecular mapping of sorghum genes expressing tolerance to damage by green bug (Homoptera: Aphididae). J Econ Entomol 98:595–602
Nwanze KF, Reddy YVR, Soman P (1990) The role of leaf surface wetness in larval behavior of the sorghum shoot fly Atherigona soccata. Entomol Exp Appl 56:187–195
Padmaja PG, Madhusudhana R, Seetharama N (2010a) Epicuticular wax and morphological traits associated with resistance to shoot fly, Atherigona soccata Rondani in sorghum, Sorghum bicolor. Entomon 34:137–146
Padmaja PG, Madhusudhana R, Seetharama N (2010b) Sorghum shoot fly. Directorate of Sorghum Research, Rajendranagar, Hyderabad 500 030, Andhra Pradesh, India. ISBN 81-89335-29-4. Pp 82
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A et al (2009) The Sorghum bicolor genome and the diversification of grasses. Nature 457:551–556
Pechan T, Cohen A, Williams QP, Luther DS (2002) Insect feeding mobilizes a unique plant defense protease that disrupts the pleiotrophic matrix of caterpillar. Proc Natl Acad Sci USA 99:13319–13323
Rana BS, Tripathi DP, Balakotaiah K, Damodar R, Rao NGP (1975) Genetic analysis of some exotic x Indian crosses in sorghum. XI. Selection of shoot fly resistance. Indian J Genet 35:350–354
Rao M, Gowda S (1967) A short note on the bionomics and control of jowar fly. Sorghum Newsletter 10:55–57
Rotheberg JM, Jacobs JR, Goodman CS, Artavanis-Tsakonas S (1990) Slit: an extra cellular protein necessary for development of midline glia and commissural axon pathways contains both EGF and LRR domains. Genes Dev 4:2169–2187
Saghai-Maroof MA, Soliman KM, Jordensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphism in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 81:8014–8018
Sandhu D, Champoux JA, Bondareva SN, Gill KS (2001) Identification and physical localization of useful genes and markers to a major gene-rich region on wheat group IA chromosomes. Genetics 157:1735–1747
Satish K, Srinivas G, Madhusudhana R, Padmaja PG, Nagaraja Reddy R, Murali Mohan S, Seetharama N (2009) Identification of quantitative trait loci for resistance to shoot fly in sorghum [Sorghum bicolor (L.) Moench]. Theo Appl Genet 119:1425–1439
Sharma HC (1993) Host plant resistance to insects in sorghum and its role in integrated pest management. Crop Prot 12:11–34
Sharma HC, Dhillon MK, Reddy BVS (2006) Expression of resistance to Atherigona soccata in F1 hybrids involving shoot fly resistant and susceptible cytoplasmic male-sterile and restorer lines of sorghum. Plant Breed 125:473–477
Singh BU, Padmaja PG, Seetharama N (2004) Stability of biochemical constituents and their relationship with resistance to shoot fly Atherigona soccata (Rond.) in seedling sorghum. Euphytica 136:279–289
Singh H, Grewal TS, Pannu PPS, Dhaliwal HS (1999) Genetics of resistance to Karnal bunt disease of wheat. Euphytica 105:125–131
Smith JSC, Kresovich S, Hopkins MS, Mitchell SE, Dean RE, Woodman WL, Lee M, Porter K (2000) Genetic diversity among elite sorghum inbred lines assessed with simple sequence repeats. Crop Sci 40:226–232
Soto PE (1974) Ovipositional preference and antibiosis in relation to resistance to sorghum shoot fly. J Econ Entomol 67:165–167
Srinivas G, Satish K, Madhusudhana R, Seetharama N (2009a) Exploration and mapping of microsatellite markers from subtracted drought stress ESTs in Sorghum bicolor (L.) Moench. Theor Appl Genet 118:703–717
Srinivas G, Satish K, Madhusudhana R, Nagaraja Reddy R, Murali Mohan S, Seetharama N (2009b) Identification of quantitative trait loci for agronomically important traits and their association with genic-microsatellite markers in sorghum. Theor Appl Genet 118:1439–1454
Taneja SL, Leuschner K (1985) Resistance screening and mechanisms of resistance in sorghum to shoot fly. In: Proceedings of the international sorghum entomology workshop, 15–21 July, 1984, Texas A&M University, College Station, Texas, USA, International Crops Research Institute for the Semi-Arid Tropics, Patancheru 502324, Andhra Pradesh, India, pp 115–129
Tao YZ, Hardy A, Drenth J, Henzell RG, Franzmann BA, Jordan DR, Butler DG, McIntyre CL (2003) Identification of two different mechanisms for sorghum midge resistance through QTL mapping. Theor Appl Genet 107:116–122
Van Ooijen JW (2005) Map-QTL 5: Software for the mapping quantitative trait loci in mapping populations. Kyazma BV, Wageningen
Van Ooijen JW, Voorrips RE (2001) JoinMap 3.0 Software for the calculation of genetic linkage maps. Plant Res Int, Wageningen
Vander Biezen EA, Jones D (1998) The NB-ARC domain: a novel signaling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 8:226–227
Veldboom LR, Lee M, Woodman WL (1994) Molecular facilitated studies of morphological traits in an elite maize population. II. Determination of QTL for grain yield and yield components. Theor Appl Genet 89:451–458
Vij S, Tyagi AK (2006) Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 Zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis. Mol Genet Genom 276:565–575
Wu Y, Huang Y (2008) Molecular mapping of QTL for resistance to the green bug Schizaphis graminum (Rondani) in Sorghum bicolor (Moench). Theor Appl Genet 117:117–124
Xiao J, Li J, Tanksley SD (1996) Identification of QTL affecting traits of agronomic importance in a recombinant inbred population derived from a sub specific rice cross. Theor Appl Genet 92:230–244
Xu C, Jing R, Mao X, Jia X, Chang X. (2007) A wheat (Triticum aestivum) protein phosphatase 2A catalytic subunit gene provides enhanced drought tolerance in Tobacco. Ann Bot. doi: 10.1093/aob/mc1285