Global root traits (GRooT) database

Global Ecology and Biogeography - Tập 30 Số 1 - Trang 25-37 - 2021
Nathaly R. Guerrero‐Ramírez1,2, Liesje Mommer3, Grégoire T. Freschet4, Colleen M. Iversen5, Michael McCormack6, Jens Kattge2,7, Hendrik Poorter8,8, Fons van der Plas9, Joana Bergmann10,11, Thomas W. Kuyper12, Larry M. York13, Helge Bruelheide2,14, Daniel C. Laughlin15, Ina C. Meier16, Catherine Roumet17, Marina Semchenko18, Christopher J. Sweeney18, Jasper van Ruijven3, Oscar J. Valverde‐Barrantes19, Isabelle Aubin20, Jane A. Catford21, Peter Manning22, Adam R. Martin23, Rubén Milla24, Vanessa Minden25,26, Juli G. Pausas27, Stuart W. Smith28,29, Nadejda A. Soudzilovskaia30, Christian Ammer31, Bradley J. Butterfield32,33, Joseph M. Craine34, Johannes H. C. Cornelissen35, Franciska T. de Vries36, Marney E. Isaac23, K. Krämer37, Christian König38, Eric G. Lamb39, V. G. Onipchenko40, Josep Peñuelas41,42, Peter B. Reich43,44, Matthias C. Rillig10,11, Lawren Sack45, Bill Shipley46, Leho Tedersoo47,48, Fernando Valladares49, Peter M. van Bodegom30, Patrick Weigelt1, Justin P. Wright50, Alexandra Weigelt2,9
1Biodiversity, Macroecology & Biogeography, Faculty of Forest Sciences and Forest Ecology University of Goettingen Göttingen Germany
2German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
3Plant Ecology and Nature Conservation, Wageningen University, Wageningen, The Netherlands
4Theoretical and Experimental Ecology Station, CNRS, University of Toulouse III, Moulis, France
5Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
6Center for Tree Science, The Morton Arboretum, Lisle, Illinois, USA
7Max Planck Institute for Biogeochemistry, Jena, Germany
8Department of Biological Sciences, Macquarie University, North Ryde, New South Wales, Australia
9Systematic Botany and Functional Biodiversity, Institute of Biology, Leipzig University, Leipzig, Germany
10Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
11Institute of Biology, Freie University Berlin, Berlin, Germany
12Soil Biology, Wageningen University, Wageningen, The Netherlands
13Noble Research Institute, Ardmore, Oklahoma, USA
14Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-Wittenberg, Halle, Germany
15Department of Botany, University of Wyoming, Laramie, Wyoming, USA
16Plant Ecology, Albrecht von Haller Institute for Plant Sciences, University of Goettingen, Göttingen, Germany
17CEFE, CNRS, Univ Montpellier, Univ Paul Valéry Montpellier 3, EPHE, IRD, Montpellier, France
18Department of Earth and Environmental Sciences, University of Manchester, Manchester, United Kingdom
19International Center of Tropical Biodiversity, Florida International University, Miami, Florida, USA
20Great Lakes Forestry Centre, Canadian Forest Service, Natural Resources Canada, Sault Ste Marie, Ontario, Canada
21Department of Geography, King's College London, London, United Kingdom
22Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Frankfurt am Main, Germany
23Department of Physical and Environmental Sciences, University of Toronto (Scarborough), Toronto, Ontario, Canada
24Area de Biodiversidad y Conservación Universidad Rey Juan Carlos Spain
25Department of Biology, Ecology and Biodiversity, Vrije Universiteit Brussel, Brussels, Belgium
26Institute for Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany
27Centro de Investigaciones sobre Desertificación (CIDE, CSIC), Valencia, Spain
28Asian School of Environment, Nanyang Technological University, Singapore
29Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway
30Environmental Biology Department, Institute of Environmental Sciences, Leiden University, Leiden, The Netherlands
31Silviculture and Forest Ecology of the Temperate Zones, University of Goettingen, Göttingen, Germany
32Center for Ecosystem Science and Society (ECOSS), Northern Arizona University, Flagstaff, Arizona, USA
33Department of Biological Sciences, Northern Arizona University, Flagstaff, Arizona, USA
34Jonah Ventures, Boulder, Colorado, USA
35Systems Ecology, Department of Ecological Science, Faculty of Science, Vrije Universiteit, Amsterdam, The Netherlands
36Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, the Netherlands
37Environmental Science Group Wageningen University & Research Wageningen The Netherlands
38Department of Geography, Humboldt Universität zu Berlin, Berlin, Germany
39Department of Plant Sciences, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
40Faculty of Biology, Moscow State Lomonosov University, Moscow, Russia
41CSIC, Global Ecology Unit CREAF-CSIC-UAB, Bellaterra, Catalonia, Spain
42CSIC, Global Ecology Unit CREAF‐CSIC‐UAB Bellaterra Catalonia Spain
43Department of Forest Resources, University of Minnesota, St Paul, Minnesota, USA
44Hawkesbury Institute for the Environment, Western Sydney University, Richmond, New South Wales, Australia
45Department of Ecology and Evolutionary Biology, University of California Los Angeles, Los Angeles, California, USA
46Département de Biologie, Université de Sherbrooke, Sherbrooke, Quebec, Canada
47Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
48Natural History Museum, University of Tartu, Tartu, Estonia
49National Museum of Natural Sciences, MNCN, CSIC, Madrid, Spain
50Biology Department, Duke University, Durham, North Carolina, USA

Tóm tắt

AbstractMotivation

Trait data are fundamental to the quantitative description of plant form and function. Although root traits capture key dimensions related to plant responses to changing environmental conditions and effects on ecosystem processes, they have rarely been included in large‐scale comparative studies and global models. For instance, root traits remain absent from nearly all studies that define the global spectrum of plant form and function. Thus, to overcome conceptual and methodological roadblocks preventing a widespread integration of root trait data into large‐scale analyses we created the Global Root Trait (GRooT) Database. GRooT provides ready‐to‐use data by combining the expertise of root ecologists with data mobilization and curation. Specifically, we (a) determined a set of core root traits relevant to the description of plant form and function based on an assessment by experts, (b) maximized species coverage through data standardization within and among traits, and (c) implemented data quality checks.

Main types of variables contained

GRooT contains 114,222 trait records on 38 continuous root traits.

Spatial location and grain

Global coverage with data from arid, continental, polar, temperate and tropical biomes. Data on root traits were derived from experimental studies and field studies.

Time period and grain

Data were recorded between 1911 and 2019.

Major taxa and level of measurement

GRooT includes root trait data for which taxonomic information is available. Trait records vary in their taxonomic resolution, with subspecies or varieties being the highest and genera the lowest taxonomic resolution available. It contains information for 184 subspecies or varieties, 6,214 species, 1,967 genera and 254 families. Owing to variation in data sources, trait records in the database include both individual observations and mean values.

Software format

GRooT includes two csv files. A GitHub repository contains the csv files and a script in R to query the database.

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