Genome of Methanoregula boonei 6A8 reveals adaptations to oligotrophic peatland environments

Microbiology (United Kingdom) - Tập 161 Số 8 - Trang 1572-1581 - 2015
Suzanna L. Bräuer1, Hinsby Cadillo‐Quiroz2, Nikos C. Kyrpides3, Tanja Woyke3, Lynne Goodwin4, Chris Detter4, Sheila Podell5, Joseph B. Yavitt6, Stephen H. Zinder7
1Department of Biology, Appalachian State University, Boone, NC 28608, USA,
2Swette Center for Environmental Biotechnology at the Biodesign Institute, Arizona State University, Tempe, AZ 85287-4501, USA
3Department of Energy Joint Genome Institute, Walnut Creek, CA, 94598, USA
4Los Alamos National Laboratory, Los Alamos, NM 87545, USA
5Scripps Institution of Oceanography, La Jolla, CA, 92093, USA
6Department of Natural Resources, Cornell University, Ithaca, NY 14853, USA,
7Department of Microbiology, Cornell University, Ithaca, NY 14853, USA

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Tài liệu tham khảo

Altendorf, 1996, The Kdp-ATPase of Escherichia coli, Biomembranes: a Multi-Volume Treatise, 5, 403

10.1007/s12038-007-0055-7

10.1080/713851165

Becher, 1994, Delta mu Na+ drives the synthesis of ATP via an delta mu Na+-translocating F1F0-ATP synthase in membrane vesicles of the archaeon Methanosarcina mazei Gö1, J Bacteriol, 176, 2543, 10.1128/jb.176.9.2543-2550.1994

10.1128/JB.186.16.5519-5522.2004

10.1111/j.1432-1033.1984.tb08178.x

10.1080/01490450490505400

10.1038/nature04810

10.1111/j.1574-6941.2006.00107.x

10.1099/ijs.0.021782-0

10.1074/jbc.270.12.6678

10.1111/j.1462-2920.2006.01036.x

10.1128/AEM.02222-07

10.1099/ijs.0.006890-0

10.1080/01490450701456651

10.1074/jbc.M009365200

Dridi, 2012, Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces, Int J Syst Evol Microbiol, 62, 1902, 10.1099/ijs.0.033712-0

Dybas, 1992, Energy transduction in the methanogen Methanococcus voltae is based on a sodium current, J Bacteriol, 174, 5575, 10.1128/jb.174.17.5575-5583.1992

10.1016/S1352-2310(98)00107-1

Epstein, 2003, The roles and regulation of potassium in bacteria, Prog Nucleic Acid Res Mol Biol, 75, 293, 10.1016/S0079-6603(03)75008-9

10.1098/rstb.1990.0026

10.1101/gr.8.3.175

10.1101/gr.8.3.175

Felsenstein, 2004

10.1128/AEM.71.4.2195-2198.2005

10.1074/jbc.274.53.37901

10.1016/j.soilbio.2012.01.018

10.1101/gr.8.3.195

10.1016/S0005-2728(00)00274-7

10.1016/j.ejcb.2011.04.011

Grigoriev, 2012, The genome portal of the Department of Energy Joint Genome Institute, Nucleic Acids Res, 40, D26, 10.1093/nar/gkr947

10.1016/j.bbabio.2014.03.004

Hales, 1996, Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis, Appl Environ Microbiol, 62, 668, 10.1128/AEM.62.2.668-675.1996

10.1128/AEM.00193-08

Han, 2006, Finishing repeat regions automatically with Dupfinisher, Proceedings of the 2006 International Conference on Bioinformatics and Computational Biology, 141

10.1007/s00248-013-0352-7

10.1016/j.femsec.2005.01.004

10.1016/j.jsb.2007.09.006

Inatomi, 1993, Membrane ATPase from the aceticlastic methanogen Methanothrix thermophila, J Bacteriol, 175, 80, 10.1128/jb.175.1.80-84.1993

10.1139/m88-095

10.1111/j.1462-2920.2005.00838.x

10.1007/978-3-540-77587-4_50

10.1128/AEM.02413-06

10.1093/bioinformatics/btm404

10.1111/j.1462-2920.2011.02659.x

10.1093/nar/gkj024

10.1074/jbc.M111.281675

10.1074/jbc.M203871200

10.1186/1745-6150-3-13

10.1023/A:1005451311009

10.1111/j.1365-2958.1992.tb01350.x

10.1111/j.1574-6968.2007.00939.x

10.1186/gb-2007-8-2-r16

10.1046/j.1365-2958.1998.00875.x

10.1085/jgp.67.3.325

10.1371/journal.pone.0022898

10.1099/ijs.0.035048-0

10.1042/BST20120294

10.1073/pnas.1115796109

10.1111/j.1574-6968.1983.tb00129.x

10.1016/S0006-3495(00)76337-5

10.1093/nar/28.1.33

10.1038/nrmicro1931

10.1128/JB.184.19.5491-5494.2002

10.1093/nar/gkl1031

10.1111/j.1462-2920.2009.01867.x

10.1080/01490450600964482