Genetic support for a quantitative trait nucleotide in the ABCG2 gene affecting milk composition of dairy cattle
Tóm tắt
Từ khóa
Tài liệu tham khảo
Georges M, Nielsen D, Mackinnon M, Mishra A, Okimoto R, Pasquino AT, Sargeant LS, Sorensen A, Steele MR, Zhao X, Womack JE, Hoeschele I: Mapping quantitative trait loci controlling milk production in dairy cattle by exploiting progeny testing. Genetics. 1995, 139: 907-920.
Khatkar MS, Thomson PC, Tammen I, Raadsma HW: Quantitative trait loci mapping in dairy cattle: review and meta-analysis. Genet Sel Evol. 2004, 36: 163-190. 10.1051/gse:2003057.
Meuwissen THE, Karlsen A, Lien S, Olsaker I, Goddard ME: Fine mapping of a quantitative trait locus for twinning rate using combined linkage and linkage disequilibrium mapping. Genetics. 2002, 161: 373-379.
Olsen HG, Lien S, Gautier M, Nilsen H, Roseth A, Berg PR, Sundsaasen KK, Svendsen M, Meuwissen THE: Mapping of a milk production quantitative trait locus to a 420-kb region on bovine chromosome 6. Genetics. 2005, 169: 275-283. 10.1534/genetics.104.031559.
Cohen-Zinder M, Seroussi E, Larkin DM, Loor JJ, Everts-van der Wind A, Lee JH, Drackley JK, Band MR, Hernandez AG, Shani M, Lewin HA, Weller JI, Ron M: Identification of a missense mutation in the bovine ABCG2 gene with a major effect on the QTL on chromosome 6 affecting milk yield and composition in Holstein cattle. Genome Res. 2005, 15: 936-944. 10.1101/gr.3806705.
Schnabel RD, Kim JJ, Ashwell MS, Sonstegard TS, Van Tassell CP, Connor EE, Taylor JF: Fine-mapping milk production quantitative trait loci on BTA6: analysis of the bovine osteopontin gene. Proc Natl Acad Sci. 2005, 102: 6896-6901. 10.1073/pnas.0502398102.
de Koning DJ: Conflicting candidates for cattle QTLs. Trends Genet. 2006, 22: 301-305. 10.1016/j.tig.2006.04.006.
Farnir F, Coppieters W, Arranz JJ, Berzi P, Cambisano N, Grisart B, Karim L, Marcq F, Moreau L, Mni M, Nezer C, Simon P, Vanmanshoven P, Wagenaar D, Georges M: Extensive genome-wide linkage disequilibrium in cattle. Genome Res. 2000, 10: 220-227. 10.1101/gr.10.2.220.
Tenesa A, Knott SA, Ward D, Smith D, Williams JL, Visscher PM: Estimation of linkage disequilibrium in a sample of the United Kingdom dairy cattle population using unphased genotypes. J Anim Sci. 2003, 81: 617-623.
Barret JC, Fry B, Maller J, Daly MJ: Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics. 2005, 21: 263-265. 10.1093/bioinformatics/bth457.
Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, Blumenstiel B, Higgins J, DeFelice M, Lochner A, Faggart M, Liu-Cordero SN, Rotimi C, Adeyemo A, Cooper R, Ward R, Lander ES, Daly MJ, Altschuler D: The structure of haplotype blocks in the human genome. Science. 2002, 21: 2225-2229. 10.1126/science.1069424.
Jonker JW, Merino G, Musters S, van Herwaarden AE, Wagenaar E, Mesman E, Dale TC, Schinkel AH: The breast cancer resistance protein BCRP (ABCG2) concentrates drugs and carcinogenic xenotoxins into the milk. Nat Med. 2005, 11: 127-129. 10.1038/nm1186.
Ron M, Cohen-Zinder M, Peter C, Weller JI, Erhardt G: A polymorphism in ABCG2 in Bos Indicus and Bos Taurus Cattle breeds. J Dairy Sci. 2006, 89: 4921-4923.
Cigene Genetic Maps. [ http://cilit.umb.no/maps/ ]
Bovine Genome Project. [ http://www.hgsc.bcm.tmc.edu/ ]
UCSC Genome Browser. [ http://www.genome.ucsc.edu/ ]
Meuwissen THE, Goddard ME: Prediction of identity by descent probabilities from marker-haplotypes. Genet Sel Evol. 2001, 33: 605-634. 10.1051/gse:2001134.
Meuwissen THE, Goddard ME: Fine mapping of quantitative trait loci using linkage disequilibria with closely linked marker loci. Genetics. 2000, 155: 421-30.
Gilmour AR, Cullis BR, Welham SJ, Thompson R: ASREML reference manual. 2001, New South Wales Agriculture, NSW, Australia