Achtman AH, Hopken UE, Bernert C, Lipp M (2009) CCR7-deficient mice develop atypically persistent germinal centers in response to thymus-independent type 2 Antigens. J Leukoc Biol 85:409–417
Alvarez JI (2005) Inhibition of toll like receptor immune responses by microbial pathogens. Front Biosci 10:582–587
Babu S, Bhat SQ, Kumar NP, Anuradha R, Kumaran P et al (2009) Attenuation of toll-like receptor expression and function in latent tuberculosis by coexistent filarial infection with restoration following antifilarial chemotherapy. PLoS Negl Trop Dis 3. Available: http://www.plosntds.org/article/info%3Adoi%2F10.1371%2Fjournal.pntd.0000489. Accessed 9 Sep 2009
Baranska M, Van Amelsvoort L, Birindelli S, Fustinoni S, Corsini E et al (2008) Association of pesticide exposure, vaccination response, and interleukin-1 gene polymorphisms. Hum Exp Toxicol 27:709–713
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Ser B 57:289–300
Burgner D, Davila S, Breunis WB, Ng SB, Li Y et al (2009) A genome-wide association study identifies novel and functionally related susceptibility loci for Kawasaki disease. PLoS Genet 5. Available: http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1000319. Accessed 9 Sep 2009
Chelvarajan RL, Collins SM, Van Willigen JM, Bondada S (2005) The unresponsiveness of aged mice to polysaccharide antigens is a result of a defect in macrophage function. J Leukoc Biol 77:503–512
Conneely KN, Boehnke M (2007) So many correlated tests, so little time! Rapid adjustment of P values for multiple correlated tests. Am J Hum Genet 81:1158–1168
Gelder CM, Lambkin R, Hart KW, Fleming D, Williams OM et al (2002) Associations between human leukocyte antigens and nonresponsiveness to influenza vaccine. J Infect Dis 185:114–117
Gupta D, Faridi MM, Aggarwal A, Kaur I (2008) Seroprevalence of anti-Vi antibodies and immunogenicity of Typhim Vi vaccine in children. Hum Vaccin 4:305–308
Han B, Kang HM, Eskin E (2009) Rapid and accurate multiple testing correction and power estimation for millions of correlated markers. PLoS Genet 5. Available: http://www.plosgenetics.org/article/info:doi%2F10.1371%2Fjournal.pgen.1000456%3Bjsessionid=252FD069666D094C2E2295EF4C4FDA28. Accessed 9 Sep 2009
Harris JB, Podolsky MJ, Bhuiyan TR, Chowdhury F, Khan AI et al (2009) Immunologic responses to vibrio cholerae in patients co-infected with intestinal parasites in Bangladesh. PLoS Negl Trop Dis 3. Available: http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0000403. Accessed 9 Sep 2009
Hennig BJ, Fielding K, Broxholme J, Diatta M, Mendy M et al (2008) Host Genetic factors and vaccine-induced immunity to Hepatitis B virus infection. PloS ONE 3. Available: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001898. Accessed 9 Sep 2009
Jin P, Wang E (2003) Polymorphism in clinical immunology—from HLA typing to immunogenetic profiling. J Transl Med 1:8
Keddy KH, Klugman KP, Hansford CF, Blondeau C, Bouveret le Cam NN (1999) Persistence of antibodies to the Salmonella typhi Vi capsular polysaccharide vaccine in South African school children ten years after immunization. Vaccine 17:110–113
Khan N, Ghousunnissa S, Jegadeeswaran SKM, Thiagarajan D, Hasnain SE et al (2007) Anti-B7–1/B7–2 antibody elicits innate-effector responses in macrophages through NF-kB-dependent pathway. Int Immunol 19:477–486
Kimman TG, Vandebriel RJ, Hoebee B (2007) Genetic variation in the response to vaccination. Community Genet 10:201–217
Klouwenberg PK, Bont L (2008) Neonatal and infantile immune responses to encapsulated bacteria and conjugate vaccines. Clin DevImmunol 628963. Available: http://www.umcutrecht.nl/NR/rdonlyres/7DF815ED-779A-4CFC-8209-6A981438FECD/11720/PeterKleinKouwenbergenLouisBont2008.pdf. Accessed 9 Sep 2009
Klugman KP, Koornhof HJ, Robbins JB, Le Cam NN (1996) Immunogenicity, efficacy and serological correlate of protection of Salmonella typhi Vi capsular polysaccharide vaccine three years after immunization. Vaccine 14:435–438
Kreutzmann S, Manuela M, Weber H, Germing U, Tournilhac O et al (2003) Human immunoglobulin M memory B cells controlling Streptococcus pneumoniae infections are generated in the spleen. J Exp Med 197:939–945
Kroon FP, van Dissel JT, Ravensbergen E, Nibbering PH, van Furth R (1999) Impaired antibody response after immunization of HIV-infected individuals with the polysaccharide vaccine against Salmonella typhi (Typhim-Vi®). Vaccine 17:2941–2945
Kruskall MS, Alper CA, Awdeh Z, Yunis EJ, Marcus-Bagley D (1992) The immune response to hepatitis B vaccine in humans: inheritance patterns in families. J Exp Med 175:495–502
Lin CH, Hsieh CC, Chen SJ, Wu TC, Chung RL et al (2006) The diagnostic value of serum interleukins 6 and 8 in children with acute gastroenteritiss. J Pediatr Gastroenterol Nutr 43:25–29
Looney RJ, Steigbigel RT (1986) Role of the Vi antigen of Salmonella typhi in resistance to host defense in vitro. J Lab Clin Med 108:506–516
Milich DR, Leroux-Roels GG (2003) Immunogenetics of the response to HBsAg vaccination. Autoimmun Rev 2:248–257
O’Neil DA, Porter EM, Elewaut D, Anderson GM, Eckmann L et al (1999) Expression and regulation of the human b-defensins hBD1 and hBD2 in intestinal epithelium. J Immunol 163:6718–6724
Obukhanych TV, Nussenzweig MC (2006) T-independent type II immune responses generate memory B cells. J Exp Med 203:305–310
Panchanathan V, Kumar S, Yeap W, Devi S, Ismail R, Sarijan S et al (2001) Comparison of safety and immunogenicity of a Vi polysaccharide typhoid vaccine with a whole-cell killed vaccine in Malaysian Air Force recruits. Bull World Health Organ 79:811–817
Poland GA (1998) Variability in immune response to pathogens: using measles vaccine to probe immunogenetic determinants of response. Am J Hum Genet 62:215–220
Poland GA, Jacobson RM (1998) The genetic basis for variation in antibody responses to vaccines. Curr Opin Pediatr 10:208–215
Poland GA, Jacobson RM, Colbourne SA, Thampy AM, Lipsky JJ et al (1999) Measles antibody seroprevalence rates among immunized Inuit, Innu and Caucasian subjects. Vaccine 17:1525–1531
Poland GA, Ovsyannikova IG, Jacobson RM (2008a) Immunogenetics of seasonal influenza vaccine response. Vaccine 26:D35–D40
Poland GA, Ovsyannikova IG, Jacobson RM (2008b) Vaccine immunogenetics: bedside to bench to population. Vaccine 26:6183–6188
Pulendran B, Kumar P, Cutler CW, Mohamadzadeh M, Van Dyke T et al (2001) Lipopolysaccharides from distinct pathogens induce different classes of immune responses in vivo. J Immunol 167:5067–5076
Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MAR et al (2007) PLINK: a toolset for wholegenome association and population-based linkage analysis. Am J Hum Genet 81:559–575
Samani NJ, Erdmann J, Hall AS, Hengstenberg C, Mangino M et al (2007) Genomewide association analysis of coronary artery disease. N Engl J Med 357:443–453
Sharma A, Qadri A (2004) Vi polysaccharide of Salmonella typhi targets the prohibitin family of molecules in intestinal epithelial cells and suppresses early inflammatory responses. Proc Natl Acad Sci USA 101:17492–17497
Snapper CM (2006) Differential regulation of protein- and polysaccharide-specific Ig isotype production in vivo in response to intact Streptococcus pneumoniae. Curr Protein Pept Sci 7:295–305
Snapper CM, Shen Y, Khan AQ, Colino J, Zelazowski P et al (2001) Distinct types of T-cell help for the induction of a humoral immune response to Streptococcus pneumoniae. Trends Immunol 22:308–311
Stephens M, Smith N, Donnelly P (2001) A new statistical method for haplotype reconstruction from population data. Am J Hum Genet 68:978–989
Sugata K, Taniguchi K, Yui A, Miyake F, Suga S et al (2008) Analysis of rotavirus antigenemia and extraintestinal manifestations in children with rotavirus gastroenteritis. Pediatrics 122:392–397
Sur D, Ochiai RL, Bhattacharya SK, Ganguly NK, Ali M et al (2009) A cluster-randomized effectiveness trial of Vi typhoid vaccine in India. N Engl J Med 361:403–405
Szu SC, Li XR, Stone AL, Robbins JB (1991) Relation between structure and immunologic properties of the Vi capsular polysaccharide. Infect Immun 59:4555–4561
van Eden W, De Bries RRP, Stanford JL, Rook GAW (1983) HLA-DR3 associated genetic control of response to multiple skin tests with new tuberculins. Clin Exp Immunol 52:287–292
van Lovern H, Van Amsterdam JGC, Vandebriel RJ, Kimman TG, Rumke HC et al (2001) Vaccine-induced antibody responses as parameters of the influence of endogenous and environmental factors. Environ Health Perspect 109:757–764
Vos Q, Lees A, Wu ZQ, Snapper CM, Mond JJ (2000) B-cell activation by Tcell-independent type 2 antigens as an integral part of the humoral immune response to pathogenic microorganisms. Immunol Rev 176:154–170
Wang C, Tang J, Song W, Lobashevsky E, Wilson CM et al (2004) HLA and cytokine gene polymorphisms are independently associated with responses to hepatitis B vaccination. Hepatology 39:978–988
Wellcome Trust Case Control Consortium (2007) Genome-wide association study of 14, 000 cases of seven common diseases and 3, 000 shared controls. Nature 447:661–678
Wellcome Trust Case Control Consortium, Australo-Anglo-American Spondylitis Consortium (TASC), Burton PR, Clayton DG, Cardon LR, Craddock N et al (2007) Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants. Nat Genet 39:1329–1337
Whitaker JA, Franco-Paredes C, del Rio C, Edupuganti S (2009) Rethinking typhoid fever vaccines: implications for travelers and people living in highly endemic areas. J Travel Med 16:46–52
Wilson RP, Raffatellu M, Chessa D, Winter SE, Tükel C et al (2008) The Vi-capsule prevents Toll-like receptor 4 recognition of Salmonella. Cell Microbiol 10:876–890
Zuckerman JN (1996) Nonresponse to hepatitis B vaccines and the kinetics of anti-HBs production. J Med Virol 50:283–288