Composition and significance of picophytoplankton in Antarctic waters

Agawin NSR, Agustí S, Duarte CM (2002) Abundance of Antarctic picophytoplankton and their response to light and nutrient manipulation. Aquat Microb Ecol 29:161–172

Berry A, Janssens D, Hümbelin M, Jore JPM, Hoste B, Cleenwerck I, Vancanneyt M, Bretzel W, Mayer AF, Lopez-Ulibarri R, Shanmugam B, Swings J, Pasamontes L (2003) Paracoccus zeaxanthinifaciens sp. nov., a zeaxanthin-producing bacterium. Int J Syst Evol Microbiol 53:231–238

Bird DF, Karl DM (1991) Massive prasinophyte bloom in northern Gerlache Strait. Antarct J US 26:152–154

Booth BC, Marchant HJ (1987) Parmales, a new order of marine chrysophytes, with descriptions of three new genera and seven new species. J Phycol 23:245–260

Booth BC, Marchant HJ (1988) Triparmaceae, a substitute name for a family in the order Parmales (Chrysophyceae). J Phycol 24:124

Bowman JP (2005) The marine clade of the family Flavobacteriaceae: The genera Aequorivita, Arenibacter, Cellulophaga, Croceibacter, Formosa, Gelidibacter, Gillisia, Maribacter, Mesonia, Muricauda, Polaribacter, Psychroflexus, Psychroserpens, Robiginitalea, Salegentibacter, Tenacibaculum, Ulvibacter, Vitellibacter and Zobellia, In: Dworkin M (ed) The Prokaryotes: an evolving electronic resource for the microbiological community, Springer, New York, pp 3rd release 3.19. ISBN 0-387-25496-X

Bowman JP, Nichols DS (2002) Aequorivita gen. nov., a member of the family Flavobacteriaceae isolated from terrestrial and marine Antarctic habitats. Int J Syst Evol Microbiol 52:1533–1541

Britton G, Brown DJ, Goodwin TW, Leuenberger F, Schocher AJ (1977) The carotenoids of Flavobacterium strain R1560. Arch Microbiol 113:33–37

Davidson AT, Marchant HJ (1992) Protist abundance and carbon concentration during a Phaeocystis-dominated bloom at an Antarctic coastal site. Polar Biol 12:387–395

Detmer AE, Bathmann UV (1997) Distribution patterns of autotrophic pico- and nanophytoplankton and their relative contribution to algal biomass during spring in the Atlantic sector of the Southern Ocean. Deep-Sea Res II 44:299–320

Díez B, Pedros-Alio C, Massana R (2001) Study of genetic diversity of eukaryotic picoplankton in different oceanic regions by small-subunit rRNA gene cloning and sequencing. Appl Environ Microb 67:2932–2941

Dubreuil C, Denis M, Conan P, Roy S (2003) Spatial-temporal variability of ultraplankton vertical distribution in the Antarctic frontal zones within 60–66°E, 43–46°S. Polar Biol 26:734–745

Fiala M, Kopczynska EE, Jeandel C, Oriol L, Vetion G (1998) Seasonal and interannual variability of size-fractionated phytoplankton biomass and community structure at station Kerfix, off the Kerguelen Islands, Antarctica. J Plankton Res 20:1341–1356

Fogg GE (1995) Some comments on picoplankton and its importance in the pelagic ecosystem. Aquat Microb Ecol 9:33–39

Fouilland E, Descolas-Gros C, Courties C, Pons V (1999) Autotrophic carbon assimilation and biomass from size-fractionated phytoplankton in the surface waters across the subtropical frontal zone (Indian Ocean). Polar Biol 21:90–96

Franzmann PD, Deprez PP, Nichols DS, McMeekin TA, Burton HA (1990) The heterotrophic, bacterial microbiota of Burton Lake, Antarctica. Polar Biol 10:261–264

Garrison DL, Mathot S (1996) Pelagic and sea ice microbial communities. In: Ross RM, Hofmann E, Quetin L (eds) Foundations for ecological research west of the Antarctic Peninsula. American Geophysical Union, Washington, Antarctic Res Ser 70 pp 155–172

Gieskes WWC, Elbrächter M (1986) Abundance of nanoplankton-size chlorophyll-containing particles caused by diatom disruption in surface waters of the Southern Ocean (Antarctic Peninsula region). Neth J Sea Res 20:291–303

Gieskes WWC, Kraay GW (1983) Dominance of Cryptophyceae during the phytoplankton spring bloom in the central North Sea detected by HPLC analysis of pigments. Mar Biol 75:179–185

Ishikawa A, Wright SW, van den Enden R, Davidson AT, Marchant HJ (2002) Abundance, size structure and community composition of phytoplankton in the Southern Ocean in the austral summer 1999/2000. Polar Biosci 15:11–26

Jagannadham MV, Chattopadhyay MK, Subbalakshmi C, Vairamani M, Narayanan K, Rao CM, Shivaji S (2000) Carotenoids of an Antarctic psychrotolerant bacterium, Sphingobacterium antarcticus, and a mesophilic bacterium, Sphingobacterium multivorum. Arch Microbiol 173:418–424

Jeffrey SW, Vesk M (1997) Introduction to marine phytoplankton and their pigment signatures. In: Jeffrey SW, Mantoura RFC, Wright SW (eds) Phytoplankton pigments in oceanography: guidelines to modern methods. ISBN 92-3-103275-5. UNESCO, Paris, pp 37–84

Jeffrey SW, Wright SW (1997) Qualitative and quantitative HPLC analysis of SCOR reference algal cultures. In: Jeffrey SW, Mantoura RFC, Wright SW (eds) Phytoplankton pigments in oceanography: guidelines to modern methods. ISBN 92-3-103275-5. UNESCO, Paris, pp 343–360

Jeffrey SW, Wright SW (2006) Photosynthetic Pigments in Marine Microalgae In: Subba Rao DV (ed) Algal cultures, analogues of blooms and applications. ISBN 1-57808-393-1. Science (in press)

Jeffrey SW, Mantoura RFC, Bjørnland T (1997) Data for the identification of 47 key phytoplankton pigments. In: Jeffrey SW, Mantoura RFC, Wright SW (eds) Phytoplankton pigments in oceanography: guidelines to modern methods. ISBN 92-3-103275-5. UNESCO, Paris, pp 449–559

Jochem FJ, Mathot S, Quéguiner B (1995) Size-fractionated primary production in the open Southern Ocean in austral spring. Polar Biol 15:381–392

Keeling PJ (2004) Diversity and evolutionary history of plastids and their hosts. Am J Bot 91:1481–1493

Kosaki S, Takahashi M, Yamaguchi Y, Aruga Y (1985) Size characteristics of chlorophyll particles in the Southern Ocean. Trans Tokyo Univ Fish 6:85–97

Mackey MD, Mackey DJ, Higgins HW, Wright SW (1996) CHEMTAX—a program for estimating class abundances from chemical markers: application to HPLC measurements of phytoplankton pigments. Mar Ecol Prog Ser 144:265–283

Mantoura RFC, Repeta DJ (1997) Calibration methods for HPLC. In: Jeffrey SW, Mantoura RFC, Wright SW (eds.) Phytoplankton pigments in oceanography: guidelines to modern methods. ISBN 92-3-103275-5. UNESCO, Paris, pp 407–428

Marañón E, Holligan PM, Barciela R, González N, Mouriño B, Pazó MJ, Varela M (2001) Patterns of phytoplankton size structure and productivity in contrasting open-ocean environments. Mar Ecol Prog Ser 216:43–56

Marchant HJ (1985) Choanoflagellates in the Antarctic marine food chain. In: Siegfried WR, Condy PR, Laws RM (eds) Antarctic nutrient cycles and food webs. Springer, Berlin, pp 271–276

Marchant HJ, Davidson AT, Wright SW (1987) The distribution and abundance of chroococcoid cyanobacteria in the Southern Ocean. Proc NIPR Symp Polar Biol 1:1–9

Morel A (1997) Consequences of a Synechococcus bloom upon the optical properties of oceanic (case 1) waters. Limnol Oceanogr 42:1746–1754

Odate T, Fukuchi M (1995) Distribution and community structure of picophytoplankton in the Southern Ocean during the late austral summer of 1992. Proc NIPR Symp Polar Biol 8:86–100

Repeta DJ, Gagosian RB (1987) Carotenoid diagenesis in recent marine sediments-I. The Peru continental shelf (15°S, 75°W). Geochim Cosmochim Acta 51:1001–1009

Rissler HM, Durnford DG (2005) Isolation of a novel carotenoid-rich protein in Cyanophora paradoxa that is immunologically related to the light-harvesting complexes of photosynthetic eukaryotes. Plant Cell Physiol 46:416–424

Runge JA, Ohman MD (1982) Size fractionation of phytoplankton as an estimate of food available to herbivores. Limnol Oceanogr 27:570–576

Schlüter L, Møhlenberg F, Havskum H, Larsen S (2000) The use of phytoplankton pigments for identifying and quantifying phytoplankton groups in coastal areas: testing the influence of light and nutrients on pigment/chlorophyll a ratios. Mar Ecol Prog Ser 192:49–63

Scott FJ, Marchant HJ (2005) Antarctic marine protists. Australian Biological Resources Study, Canberra, and Australian Antarctic Division, Hobart, p 563

Shiomoto A, Kawaguchi S, Imai K, Tsuruga Y (1998) Chla-specific productivity of picophytoplankton not higher than that of larger phytoplankton off the South Shetland Islands in summer. Polar Biol 19:361–364

Sieburth JMcN, Smetacek V, Lenz J (1978) Pelagic ecosystem structure: heterotrophic compartments of the plankton and their relationships to plankton size fractions. Limnol Oceanogr 23:1256–1263

Smith WO, Lancelot C (2004) Bottom-up versus top-down control in phytoplankton of the Southern Ocean. Antarct Sci 16:531–539

Staley JT, Gosink JJ (1999) Poles apart: biodiversity and biogeography of sea ice bacteria. Ann Rev Microbiol 53:189–215

Stockner JG (1988) Phototrophic picoplankton: An overview from marine and freshwater ecosystems. Limnol Oceanogr 33:765–775

Vanucci S, Bruni V (1998) Presence or absence of picophytoplankton in the western Ross Sea during spring 1994: a matter of size definition? Polar Biol 20:9–13

Veldhuis MJW, Timmermans KR, Croot P, van der Wagt B (2005) Picoplankton; a comparative study of their biochemical composition and photosynthetic properties. J Sea Res 53:7–24

Walker TD, Marchant HJ (1989) The seasonal occurrence of chroococcoid cyanobacteria at an Antarctic coastal site. Polar Biol 9:93–96

Weber LH, El-Sayed SZ (1987) Contributions of the net, nano- and picoplankton to the phytoplankton standing crop in the Southern Ocean. J Plankton Res 9:973–994

Wright SW, Mantoura RFC (1997) Guidelines for collection and pigment analysis of field samples. In: Jeffrey SW, Mantoura RFC, Wright SW (eds) Phytoplankton pigments in oceanography: guidelines to modern methods. ISBN 92-3-103275-5. UNESCO, Paris, pp 429–445

Wright SW, van den Enden R (2000) Phytoplankton community structure and stocks in the East Antarctic marginal ice zone (BROKE survey, January–March 1996) determined by CHEMTAX analysis of HPLC pigment signatures. Deep-Sea Res II 47:2363–2400

Wright SW, Thomas DP, Marchant HJ, Higgins HW, Mackey MD, Mackey DJ (1996) Analysis of phytoplankton of the Australian sector of the Southern Ocean: comparisons of microscopy and size frequency data with interpretations of pigment HPLC data using the ‘CHEMTAX’ matrix factorisation program. Mar Ecol Prog Ser 144:285–298

Wright SW, van den Enden RL, Pearce I, Davidson AT, Scott FJ, Westwood K (accepted) Phytoplankton community structure and stocks in the Southern Ocean (30–80°E) determined by CHEMTAX analysis of HPLC pigment signatures. Deep-Sea Res

Xiuren N, Zilin L, Genhai Z, Junxian S (1996) Size-fractionated biomass and productivity of phytoplankton and particulate organic carbon in the Southern Ocean. Polar Biol 16:1–11

Zapata M, Rodríguez F, Garrido JL (2000) Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reversed phase C8 column and pyridine-containing mobile phases. Mar Ecol Prog Ser 195:29–45

Zapata M, Jeffrey SW, Wright SW, Rodríguez F, Garrido JL, Clementson L (2004) Photosynthetic pigments in 37 species (65 strains) of Haptophyta: implications for oceanography and chemotaxonomy. Mar Ecol Prog Ser 270:83–102