Cluster of re-configurable nodes for scanning large genomic banks

Parallel Computing - Tập 31 - Trang 73-96 - 2005
Stéphane Guyetant1, Mathieu Giraud1, Ludovic L’Hours1, Steven Derrien1, Stéphane Rubini2, Dominique Lavenier1, Frédéric Raimbault3
1IRISA/CNRS/Université de Rennes 1, 35042 Rennes Cedex, France
2Université de Bretagne Occidentale, BP 809, 29285 Brest Cedex, France
3Université de Bretagne Sud, BP 573, 56017 Vannes Cedex, France

Tài liệu tham khảo

Allan, 2002, 2001 Technology roadmap for semiconductors, Computer

Biocceleration. Available from: <http://www.biocceleration.com/BioXLH-technical.html>

ITRS Roadmap Committee, International technology roadmap for semiconductors. Technical Report; 2003

Data Search Systems Exegy. Available from: <http://www.exegy.com>

Genomes online. Available from: <http://www.genomesonline.org>

J. Gray, Hands-on computer architecture—teaching processor and integrated systems design with FPGAs, in: Workshop on Computer Architecture Education, June 2000

M. Gokhale, J.M. Stone, J. Arnold, M. Kalinowski, Stream-oriented FPGA computing in the Streams-C high level language, in: IEEE International Symposium on FPGAs for Custom Computing Machines, 2000, pp. 49–56

Keeton, 1998, A case for intelligent disks (IDisks), SIGMOD Rec., 27, 42, 10.1145/290593.290602

Ma, 2002, PatternHunter: faster and more sensitive homology search, Bioinformatics, 18, 440, 10.1093/bioinformatics/18.3.440

Hulo, 2004, Recent improvements to the PROSITE database, Nucl. Acids Res., 32, D134, 10.1093/nar/gkh044

Paracel. Available from: <http://www.paracel.com/gm/ov.htm>

Rose, 1993, Architecture of field programmable gate array, Proc. IEEE, 81, 10.1109/5.231340

Stonebraker, 1988

Timelogic. Available from: <http://www.timelogic.com>

Vingron, 2001

Vuillemin, 1994, On computing power, LNCS, Program. Lang. Syst. Architect., 782, 10.1007/3-540-57840-4_25